| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is tuf [H]
Identifier: 21675000
GI number: 21675000
Start: 2064824
End: 2066005
Strand: Reverse
Name: tuf [H]
Synonym: CT2191
Alternate gene names: 21675000
Gene position: 2066005-2064824 (Counterclockwise)
Preceding gene: 21675001
Following gene: 21674999
Centisome position: 95.87
GC content: 55.25
Gene sequence:
>1182_bases ATGGCTAAAGAGTCATACAAGAGGGATAAACCTCACGTAAATATTGGTACAATCGGTCACGTTGACCACGGTAAAACCAC TCTTACCGCTGCAATCACCAGCGTTCTCGCCAAGCAGGGCATGGCAACTTTACGTGAGTTCAGTGACATCGACAAAGCTC CCGAAGAGAGAGAGCGCGGTATCACCATCTCGACGGCACACGTCGAGTATCAGACCGCAAAGCGTCACTACGCTCACATT GATTGCCCTGGTCACGCTGACTATATCAAAAACATGATCACCGGTGCGGCCCAGATGGACGGCGCTATCCTCGTCGTTGC CGGTACCGACGGCCCGATGCCCCAGACCCGTGAGCACATCCTGCTTGCCCGTCAGGTGAACGTTCCTGCGCTGGTCGTCT TCCTGAACAAGGTTGACATCGCTGATCCGGAACTTCTTGAGCTGGTCGAGATGGAGCTTCGTGAGCTTCTTACCGAATAC GGCTTCCCTGGCGACGATATTCCGATCATCAAAGGTTCGGCACTCAAGGCGCTCGAGGGGGATCCGGAGGCTGAGAAGCA GATTATGGAACTCATGGACGCCGTTGACAGCTACATTCCGCAGCCTGTCCGTGACATTGACAAGCCGTTCCTAATGCCGG TCGAAGACGTGTTCTCCATCTCTGGTCGCGGTACCGTCGGTACTGGTCGTATCGAGAGGGGCCGCATCAAGGTTGGCGAC GAAGTCGAGATCGTCGGTATCAAGCCGACCGCAAAATCGGTTGTTACCGGTATTGAAATGTTCCAGAAGACCCTCGACGA AGGTCAGGCAGGCGATAACGCAGGTCTGCTTCTCCGTGGTGTTGACAAGAATGCGCTCGAGCGCGGCATGGTTATCGCCA AGCCGGGTTCGATTACCCCACACACCAAGTTCAAGGCTGAGGTTTACATCCTGAAGAAGGAAGAGGGTGGCCGTCACACT CCGTTCTTCAACGGCTATCGTCCGCAGTTTTACTTCAGAACCACCGACGTTACCGGTTCGGTGACCCTTCCTGAGGGCGT CGAAATGGTTATGCCTGGTGACAACCTCTCCATCGATGTCGAGCTGATCGCTCCTATCGCCATGGAAGAGAGCCTCAGGT TCGCAATCCGCGAAGGCGGCCGTACGGTTGGTGCCGGTTCGGTAACCAAAATCGTCGAGTGA
Upstream 100 bases:
>100_bases CATCGCCGAAGCACTGCAAGAGAAGAGGGTTGGCAAGGATTCCGAATAACAGTTTTTCATCACCGCATTACTAAACAGAT AACCGACAGGGAGAAGAGTT
Downstream 100 bases:
>100_bases TCGGATTGATCGTTATCCCGGGGCGAGGCAGCGCTCTCGCCCCTTTTTTATTGAAACCATCGAAACAGGGATAGACCAGT GGCTGTTCAGCAAAAGATCA
Product: elongation factor Tu
Products: GDP; phosphate
Alternate protein names: EF-Tu [H]
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MAKESYKRDKPHVNIGTIGHVDHGKTTLTAAITSVLAKQGMATLREFSDIDKAPEERERGITISTAHVEYQTAKRHYAHI DCPGHADYIKNMITGAAQMDGAILVVAGTDGPMPQTREHILLARQVNVPALVVFLNKVDIADPELLELVEMELRELLTEY GFPGDDIPIIKGSALKALEGDPEAEKQIMELMDAVDSYIPQPVRDIDKPFLMPVEDVFSISGRGTVGTGRIERGRIKVGD EVEIVGIKPTAKSVVTGIEMFQKTLDEGQAGDNAGLLLRGVDKNALERGMVIAKPGSITPHTKFKAEVYILKKEEGGRHT PFFNGYRPQFYFRTTDVTGSVTLPEGVEMVMPGDNLSIDVELIAPIAMEESLRFAIREGGRTVGAGSVTKIVE
Sequences:
>Translated_393_residues MAKESYKRDKPHVNIGTIGHVDHGKTTLTAAITSVLAKQGMATLREFSDIDKAPEERERGITISTAHVEYQTAKRHYAHI DCPGHADYIKNMITGAAQMDGAILVVAGTDGPMPQTREHILLARQVNVPALVVFLNKVDIADPELLELVEMELRELLTEY GFPGDDIPIIKGSALKALEGDPEAEKQIMELMDAVDSYIPQPVRDIDKPFLMPVEDVFSISGRGTVGTGRIERGRIKVGD EVEIVGIKPTAKSVVTGIEMFQKTLDEGQAGDNAGLLLRGVDKNALERGMVIAKPGSITPHTKFKAEVYILKKEEGGRHT PFFNGYRPQFYFRTTDVTGSVTLPEGVEMVMPGDNLSIDVELIAPIAMEESLRFAIREGGRTVGAGSVTKIVE >Mature_392_residues AKESYKRDKPHVNIGTIGHVDHGKTTLTAAITSVLAKQGMATLREFSDIDKAPEERERGITISTAHVEYQTAKRHYAHID CPGHADYIKNMITGAAQMDGAILVVAGTDGPMPQTREHILLARQVNVPALVVFLNKVDIADPELLELVEMELRELLTEYG FPGDDIPIIKGSALKALEGDPEAEKQIMELMDAVDSYIPQPVRDIDKPFLMPVEDVFSISGRGTVGTGRIERGRIKVGDE VEIVGIKPTAKSVVTGIEMFQKTLDEGQAGDNAGLLLRGVDKNALERGMVIAKPGSITPHTKFKAEVYILKKEEGGRHTP FFNGYRPQFYFRTTDVTGSVTLPEGVEMVMPGDNLSIDVELIAPIAMEESLRFAIREGGRTVGAGSVTKIVE
Specific function: This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis [H]
COG id: COG0050
COG function: function code J; GTPases - translation elongation factors
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily [H]
Homologues:
Organism=Homo sapiens, GI34147630, Length=394, Percent_Identity=58.6294416243655, Blast_Score=483, Evalue=1e-136, Organism=Homo sapiens, GI223555963, Length=436, Percent_Identity=31.651376146789, Blast_Score=179, Evalue=3e-45, Organism=Homo sapiens, GI5729864, Length=436, Percent_Identity=31.651376146789, Blast_Score=179, Evalue=3e-45, Organism=Homo sapiens, GI4503475, Length=446, Percent_Identity=28.9237668161435, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI4503471, Length=446, Percent_Identity=29.1479820627803, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI54607086, Length=346, Percent_Identity=32.9479768786127, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI194018522, Length=444, Percent_Identity=26.1261261261261, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI194097354, Length=444, Percent_Identity=26.1261261261261, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI194018520, Length=444, Percent_Identity=26.1261261261261, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI46094014, Length=443, Percent_Identity=26.6365688487585, Blast_Score=119, Evalue=3e-27, Organism=Homo sapiens, GI4503507, Length=278, Percent_Identity=27.6978417266187, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI157426893, Length=238, Percent_Identity=28.1512605042017, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI94966754, Length=134, Percent_Identity=35.0746268656716, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI1790412, Length=393, Percent_Identity=71.7557251908397, Blast_Score=580, Evalue=1e-167, Organism=Escherichia coli, GI1789737, Length=393, Percent_Identity=71.7557251908397, Blast_Score=580, Evalue=1e-167, Organism=Escherichia coli, GI2367247, Length=381, Percent_Identity=30.1837270341207, Blast_Score=138, Evalue=6e-34, Organism=Escherichia coli, GI48994988, Length=241, Percent_Identity=33.6099585062241, Blast_Score=101, Evalue=8e-23, Organism=Escherichia coli, GI1789108, Length=328, Percent_Identity=29.5731707317073, Blast_Score=96, Evalue=5e-21, Organism=Escherichia coli, GI1788922, Length=140, Percent_Identity=35, Blast_Score=65, Evalue=7e-12, Organism=Escherichia coli, GI1789738, Length=151, Percent_Identity=34.4370860927152, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17556456, Length=399, Percent_Identity=53.1328320802005, Blast_Score=403, Evalue=1e-112, Organism=Caenorhabditis elegans, GI25141371, Length=370, Percent_Identity=46.4864864864865, Blast_Score=343, Evalue=1e-94, Organism=Caenorhabditis elegans, GI17552884, Length=452, Percent_Identity=31.1946902654867, Blast_Score=172, Evalue=3e-43, Organism=Caenorhabditis elegans, GI17569207, Length=452, Percent_Identity=31.1946902654867, Blast_Score=172, Evalue=3e-43, Organism=Caenorhabditis elegans, GI32566303, Length=429, Percent_Identity=31.002331002331, Blast_Score=150, Evalue=1e-36, Organism=Caenorhabditis elegans, GI115532067, Length=440, Percent_Identity=29.0909090909091, Blast_Score=141, Evalue=6e-34, Organism=Caenorhabditis elegans, GI115532065, Length=440, Percent_Identity=29.0909090909091, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI32566629, Length=442, Percent_Identity=26.6968325791855, Blast_Score=133, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17506081, Length=298, Percent_Identity=30.5369127516779, Blast_Score=117, Evalue=9e-27, Organism=Caenorhabditis elegans, GI32566301, Length=147, Percent_Identity=41.4965986394558, Blast_Score=98, Evalue=8e-21, Organism=Caenorhabditis elegans, GI17509919, Length=281, Percent_Identity=29.1814946619217, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17557151, Length=235, Percent_Identity=30.6382978723404, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17556745, Length=133, Percent_Identity=34.5864661654135, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6324761, Length=397, Percent_Identity=67.5062972292191, Blast_Score=536, Evalue=1e-153, Organism=Saccharomyces cerevisiae, GI6325337, Length=444, Percent_Identity=29.2792792792793, Blast_Score=160, Evalue=3e-40, Organism=Saccharomyces cerevisiae, GI6319594, Length=444, Percent_Identity=29.2792792792793, Blast_Score=160, Evalue=3e-40, Organism=Saccharomyces cerevisiae, GI6322937, Length=454, Percent_Identity=24.4493392070485, Blast_Score=102, Evalue=7e-23, Organism=Saccharomyces cerevisiae, GI6320863, Length=285, Percent_Identity=29.8245614035088, Blast_Score=92, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6320377, Length=344, Percent_Identity=28.1976744186047, Blast_Score=89, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6323320, Length=238, Percent_Identity=29.8319327731092, Blast_Score=74, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6323098, Length=135, Percent_Identity=34.0740740740741, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI281363316, Length=389, Percent_Identity=58.8688946015424, Blast_Score=475, Evalue=1e-134, Organism=Drosophila melanogaster, GI17864358, Length=389, Percent_Identity=58.8688946015424, Blast_Score=475, Evalue=1e-134, Organism=Drosophila melanogaster, GI19921738, Length=389, Percent_Identity=48.0719794344473, Blast_Score=390, Evalue=1e-109, Organism=Drosophila melanogaster, GI24652838, Length=446, Percent_Identity=30.2690582959641, Blast_Score=175, Evalue=4e-44, Organism=Drosophila melanogaster, GI17137572, Length=446, Percent_Identity=30.2690582959641, Blast_Score=175, Evalue=4e-44, Organism=Drosophila melanogaster, GI45553807, Length=447, Percent_Identity=30.6487695749441, Blast_Score=175, Evalue=4e-44, Organism=Drosophila melanogaster, GI45553816, Length=447, Percent_Identity=30.6487695749441, Blast_Score=175, Evalue=4e-44, Organism=Drosophila melanogaster, GI24651721, Length=447, Percent_Identity=30.6487695749441, Blast_Score=175, Evalue=4e-44, Organism=Drosophila melanogaster, GI17864154, Length=447, Percent_Identity=30.6487695749441, Blast_Score=175, Evalue=4e-44, Organism=Drosophila melanogaster, GI19922690, Length=304, Percent_Identity=32.8947368421053, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI45550900, Length=447, Percent_Identity=27.9642058165548, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI17137380, Length=449, Percent_Identity=25.6124721603563, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI24647046, Length=280, Percent_Identity=28.9285714285714, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24647048, Length=280, Percent_Identity=28.9285714285714, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI78706572, Length=249, Percent_Identity=26.9076305220884, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI28572034, Length=165, Percent_Identity=35.7575757575758, Blast_Score=68, Evalue=9e-12, Organism=Drosophila melanogaster, GI28574573, Length=140, Percent_Identity=36.4285714285714, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: 20568 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000795 - InterPro: IPR005225 - InterPro: IPR009001 - InterPro: IPR004161 - InterPro: IPR004541 - InterPro: IPR004160 - InterPro: IPR009000 [H]
Pfam domain/function: PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2; PF03143 GTP_EFTU_D3 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 42900; Mature: 42769
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKESYKRDKPHVNIGTIGHVDHGKTTLTAAITSVLAKQGMATLREFSDIDKAPEERERG CCCCCCCCCCCCEEECEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC ITISTAHVEYQTAKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAGTDGPMPQTREHI CEEEEEEEEEHHHHCCEEEEECCCHHHHHHHHHHCHHHCCCEEEEEECCCCCCCCCHHHE LLARQVNVPALVVFLNKVDIADPELLELVEMELRELLTEYGFPGDDIPIIKGSALKALEG EEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHCCC DPEAEKQIMELMDAVDSYIPQPVRDIDKPFLMPVEDVFSISGRGTVGTGRIERGRIKVGD CCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCCCCCEECCEEEECC EVEIVGIKPTAKSVVTGIEMFQKTLDEGQAGDNAGLLLRGVDKNALERGMVIAKPGSITP EEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHCCEEEECCCCCCC HTKFKAEVYILKKEEGGRHTPFFNGYRPQFYFRTTDVTGSVTLPEGVEMVMPGDNLSIDV CCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCEEECCCCCEEEECCCCCEEEE ELIAPIAMEESLRFAIREGGRTVGAGSVTKIVE EEECCHHHHHHHHHHHHCCCCEECCCCHHHHCC >Mature Secondary Structure AKESYKRDKPHVNIGTIGHVDHGKTTLTAAITSVLAKQGMATLREFSDIDKAPEERERG CCCCCCCCCCCEEECEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC ITISTAHVEYQTAKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAGTDGPMPQTREHI CEEEEEEEEEHHHHCCEEEEECCCHHHHHHHHHHCHHHCCCEEEEEECCCCCCCCCHHHE LLARQVNVPALVVFLNKVDIADPELLELVEMELRELLTEYGFPGDDIPIIKGSALKALEG EEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHCCC DPEAEKQIMELMDAVDSYIPQPVRDIDKPFLMPVEDVFSISGRGTVGTGRIERGRIKVGD CCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCCCCCEECCEEEECC EVEIVGIKPTAKSVVTGIEMFQKTLDEGQAGDNAGLLLRGVDKNALERGMVIAKPGSITP EEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHCCEEEECCCCCCC HTKFKAEVYILKKEEGGRHTPFFNGYRPQFYFRTTDVTGSVTLPEGVEMVMPGDNLSIDV CCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCEEECCCCCEEEECCCCCEEEE ELIAPIAMEESLRFAIREGGRTVGAGSVTKIVE EEECCHHHHHHHHHHHHCCCCEECCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8085791 [H]