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The map label for this gene is secY [H]

Identifier: 21674978

GI number: 21674978

Start: 2053549

End: 2054874

Strand: Reverse

Name: secY [H]

Synonym: CT2169

Alternate gene names: 21674978

Gene position: 2054874-2053549 (Counterclockwise)

Preceding gene: 21674979

Following gene: 21674977

Centisome position: 95.36

GC content: 54.3

Gene sequence:

>1326_bases
ATGAAGCTTACTGAGAGTATCAGGAATATCAATAAAATCCCGGAGTTAAGGCAGCGTATACTGTATACCCTCCTGCTTCT
GTTTGTTTACAGGCTGGGATCGCATATCACCATCCCAGGGGTTGACGCCTCTGCGGTAGCGAGCGCAACCACCTCTCATT
CCAACGACCTGTTCGGTCTGTTTGACCTGTTTGTCGGAGGCGCGTTCGCTCGCGCCTCGATCTTTTCTCTTGGCATCATG
CCGTACATCTCGGCCTCCATCATCATCCAGTTGCTTGGCGCGGTGACTCCTTATGTGCAGAAGCTCCAGAAAGAGGGTGA
GGAGGGACGCCAGAAGATCAACCAGTATACTCGCTACGGCACTATTCTTATAGCGCTGCTGCAGGCGTGGGGCGTGAGTG
TCAACCTTTCAAGCCCATCATCGTTCGGCAAGGTGGTTGTGCCCGATCCGGGTTTTTTCTTTACCATCACTGCGGTCATT
ATTCTCACTGCCAGCACCGTGTTTGTCATGTGGCTTGGCGAGCTGATCACGGAACGGGGGATCGGAAACGGCATATCGCT
TATCATCATGATCGGTATTCTGGCAAGGTTCCCGGCCTCGCTGGTTGCTGAAGCCCAGTCGGTTTCGTTTGGCAGCAAGA
ACTGGATCGTCGAGATTGTTATCATGGCGTTGATGGTAGCCATTGTGGCTATCGTCGTCATCTTGACCGTCGCCACGAGA
AGGATCCCCGTACAGCACGCCAAACGCGTCGTGGGCCGCAAGGTTTATGGTGGCGGTACGCAGTACATCCCGATAAAGAT
CAACACGGCTGGCGTCATGCCGATCATTTTCGCCCAGTCGATCATGTTTCTTCCGAGCACTTTCCTTTCATTTTTCCCAG
AGAGCGAGGCGATGCAGAAAGTCGCTGCGGCGTTCGCTTACGACTCGTGGTTTTACGCGGTCGTGTTCGGTCTGATGATC
GTCTTCTTCACCTATTTCTATACGGCCATCGCCTTTAACCCGAAAGAGGTTGCCGACACGATGCGCCGTCAGGGCGGCTT
CATTCCGGGCGTTCGTCCGGGCAAGAACACCGAGGAGTTCATCGACAACATCCTGACCCGGATCACGCTTCCGGGGGCCA
TTGCGCTTGCTGTAATCGCAATTTTACCGACTTTTCTGACCAAGTTTGTCAACGTGACTCCAGGCTTCGCCAACTTCTTC
GGCGGTACCAGTCTGCTCATCGTCGTCAGCGTGGGACTCGATACGCTTCAGCAGGTCGAGAGCCACTTGATGATGCGTCA
TTACGACGGATTCATGAAGACGGCCAAGGCGCGCGGACGCCGGTAA

Upstream 100 bases:

>100_bases
TCTGCCGTTTGAAGAGGCTCTTTTGACTCCTAAAGCCAAAGTTGTCAAGGTCAAGAAAGAGAAGAAATCGGTCAAGTCTT
GAATCAGGGAATGAGCTGCC

Downstream 100 bases:

>100_bases
GCAAGAGACGGGACATGATCACCATCAAGAGCGAACGGGAAATAGAACTGATGCGGGAGGCTGGAAGACTGGTCGCCCGC
GTGCTTGACATGCTGGAGAA

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MKLTESIRNINKIPELRQRILYTLLLLFVYRLGSHITIPGVDASAVASATTSHSNDLFGLFDLFVGGAFARASIFSLGIM
PYISASIIIQLLGAVTPYVQKLQKEGEEGRQKINQYTRYGTILIALLQAWGVSVNLSSPSSFGKVVVPDPGFFFTITAVI
ILTASTVFVMWLGELITERGIGNGISLIIMIGILARFPASLVAEAQSVSFGSKNWIVEIVIMALMVAIVAIVVILTVATR
RIPVQHAKRVVGRKVYGGGTQYIPIKINTAGVMPIIFAQSIMFLPSTFLSFFPESEAMQKVAAAFAYDSWFYAVVFGLMI
VFFTYFYTAIAFNPKEVADTMRRQGGFIPGVRPGKNTEEFIDNILTRITLPGAIALAVIAILPTFLTKFVNVTPGFANFF
GGTSLLIVVSVGLDTLQQVESHLMMRHYDGFMKTAKARGRR

Sequences:

>Translated_441_residues
MKLTESIRNINKIPELRQRILYTLLLLFVYRLGSHITIPGVDASAVASATTSHSNDLFGLFDLFVGGAFARASIFSLGIM
PYISASIIIQLLGAVTPYVQKLQKEGEEGRQKINQYTRYGTILIALLQAWGVSVNLSSPSSFGKVVVPDPGFFFTITAVI
ILTASTVFVMWLGELITERGIGNGISLIIMIGILARFPASLVAEAQSVSFGSKNWIVEIVIMALMVAIVAIVVILTVATR
RIPVQHAKRVVGRKVYGGGTQYIPIKINTAGVMPIIFAQSIMFLPSTFLSFFPESEAMQKVAAAFAYDSWFYAVVFGLMI
VFFTYFYTAIAFNPKEVADTMRRQGGFIPGVRPGKNTEEFIDNILTRITLPGAIALAVIAILPTFLTKFVNVTPGFANFF
GGTSLLIVVSVGLDTLQQVESHLMMRHYDGFMKTAKARGRR
>Mature_441_residues
MKLTESIRNINKIPELRQRILYTLLLLFVYRLGSHITIPGVDASAVASATTSHSNDLFGLFDLFVGGAFARASIFSLGIM
PYISASIIIQLLGAVTPYVQKLQKEGEEGRQKINQYTRYGTILIALLQAWGVSVNLSSPSSFGKVVVPDPGFFFTITAVI
ILTASTVFVMWLGELITERGIGNGISLIIMIGILARFPASLVAEAQSVSFGSKNWIVEIVIMALMVAIVAIVVILTVATR
RIPVQHAKRVVGRKVYGGGTQYIPIKINTAGVMPIIFAQSIMFLPSTFLSFFPESEAMQKVAAAFAYDSWFYAVVFGLMI
VFFTYFYTAIAFNPKEVADTMRRQGGFIPGVRPGKNTEEFIDNILTRITLPGAIALAVIAILPTFLTKFVNVTPGFANFF
GGTSLLIVVSVGLDTLQQVESHLMMRHYDGFMKTAKARGRR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=428, Percent_Identity=42.7570093457944, Blast_Score=320, Evalue=9e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 48296; Mature: 48296

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTESIRNINKIPELRQRILYTLLLLFVYRLGSHITIPGVDASAVASATTSHSNDLFGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHCCCCCCHHHH
FDLFVGGAFARASIFSLGIMPYISASIIIQLLGAVTPYVQKLQKEGEEGRQKINQYTRYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
TILIALLQAWGVSVNLSSPSSFGKVVVPDPGFFFTITAVIILTASTVFVMWLGELITERG
HHHHHHHHHHCCEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IGNGISLIIMIGILARFPASLVAEAQSVSFGSKNWIVEIVIMALMVAIVAIVVILTVATR
CCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIPVQHAKRVVGRKVYGGGTQYIPIKINTAGVMPIIFAQSIMFLPSTFLSFFPESEAMQK
CCCHHHHHHHHCCCEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VAAAFAYDSWFYAVVFGLMIVFFTYFYTAIAFNPKEVADTMRRQGGFIPGVRPGKNTEEF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHH
IDNILTRITLPGAIALAVIAILPTFLTKFVNVTPGFANFFGGTSLLIVVSVGLDTLQQVE
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHH
SHLMMRHYDGFMKTAKARGRR
HHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKLTESIRNINKIPELRQRILYTLLLLFVYRLGSHITIPGVDASAVASATTSHSNDLFGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHCCCCCCHHHH
FDLFVGGAFARASIFSLGIMPYISASIIIQLLGAVTPYVQKLQKEGEEGRQKINQYTRYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
TILIALLQAWGVSVNLSSPSSFGKVVVPDPGFFFTITAVIILTASTVFVMWLGELITERG
HHHHHHHHHHCCEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IGNGISLIIMIGILARFPASLVAEAQSVSFGSKNWIVEIVIMALMVAIVAIVVILTVATR
CCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIPVQHAKRVVGRKVYGGGTQYIPIKINTAGVMPIIFAQSIMFLPSTFLSFFPESEAMQK
CCCHHHHHHHHCCCEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VAAAFAYDSWFYAVVFGLMIVFFTYFYTAIAFNPKEVADTMRRQGGFIPGVRPGKNTEEF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHH
IDNILTRITLPGAIALAVIAILPTFLTKFVNVTPGFANFFGGTSLLIVVSVGLDTLQQVE
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHH
SHLMMRHYDGFMKTAKARGRR
HHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA