| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674920
Identifier: 21674920
GI number: 21674920
Start: 1998630
End: 1999166
Strand: Direct
Name: 21674920
Synonym: CT2111
Alternate gene names: NA
Gene position: 1998630-1999166 (Clockwise)
Preceding gene: 21674918
Following gene: 21674921
Centisome position: 92.75
GC content: 53.45
Gene sequence:
>537_bases GTGGTTATGTCCAAAGAAAAAGCGCTGATCGAAATTCGTCTCGCGGGTCTTGCACAGGGAACGCACGAGTTCGATTTCAC CTGCAAAGCGGCTGATTTTGCCGATCCGGCTCTCGCCGGGGCTGGATTTTCAAGGGACGTGTCGGTCAATGTAAGCGTCG AGAAGCTGGATGGCGAGATGATTGTCACCCTGAATACTTCGGCGACAGCCAATCTGACCTGCGATCTGTGCCTTGCACCG ATCACCTCCGAGCTGAAAGGTTCGTACCGGATTTATTATGGCTACGAACAGGCTGGCGAACCGCAGGAAGAACGTGACGA GGAGTATCGGCTTATCGACAGGAATACGCTTGCGCTCGATCTAACCGAGGATGTCCGCGAGACACTGCTGCTCTCCGTTC CCATGAAAGTCACCTGCAAGGACAATCCCGATTGCCGGGTGTTCCATCAGGAAAAATTGAGTGAACCGGGCGAAGACCAT CTGCCCGACAGCGACTGGCAGGAGTCGCTCGAAAAACTGAAAAACAAGTATCGTTAA
Upstream 100 bases:
>100_bases CAACGATATTTTTTAATAATTTTTCCGTCTGACTGGCGGGTTCTGGCTTTTCTTTTTCGAATATTATTTTTGTACATTGA TGCTCTTTTATGGAAAAGAG
Downstream 100 bases:
>100_bases CCGTTGATTCTAAACTGAATAGATTATGGCCAACCCGAAAGCCAAGATGTCCAAGTCCAGAAGGGACAAGAGAAGAGCAC AGTTCAACGCGCGCACCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MVMSKEKALIEIRLAGLAQGTHEFDFTCKAADFADPALAGAGFSRDVSVNVSVEKLDGEMIVTLNTSATANLTCDLCLAP ITSELKGSYRIYYGYEQAGEPQEERDEEYRLIDRNTLALDLTEDVRETLLLSVPMKVTCKDNPDCRVFHQEKLSEPGEDH LPDSDWQESLEKLKNKYR
Sequences:
>Translated_178_residues MVMSKEKALIEIRLAGLAQGTHEFDFTCKAADFADPALAGAGFSRDVSVNVSVEKLDGEMIVTLNTSATANLTCDLCLAP ITSELKGSYRIYYGYEQAGEPQEERDEEYRLIDRNTLALDLTEDVRETLLLSVPMKVTCKDNPDCRVFHQEKLSEPGEDH LPDSDWQESLEKLKNKYR >Mature_178_residues MVMSKEKALIEIRLAGLAQGTHEFDFTCKAADFADPALAGAGFSRDVSVNVSVEKLDGEMIVTLNTSATANLTCDLCLAP ITSELKGSYRIYYGYEQAGEPQEERDEEYRLIDRNTLALDLTEDVRETLLLSVPMKVTCKDNPDCRVFHQEKLSEPGEDH LPDSDWQESLEKLKNKYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19997; Mature: 19997
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMSKEKALIEIRLAGLAQGTHEFDFTCKAADFADPALAGAGFSRDVSVNVSVEKLDGEM CCCCCCCEEEEEEEECCCCCCCCCCEEEECCCCCCCHHCCCCCCCCEEEEEEEEECCCEE IVTLNTSATANLTCDLCLAPITSELKGSYRIYYGYEQAGEPQEERDEEYRLIDRNTLALD EEEEECCCCCCEEEEEEECCCHHHCCCCEEEEECCCCCCCCHHHCCCCEEEEECCEEEEE LTEDVRETLLLSVPMKVTCKDNPDCRVFHQEKLSEPGEDHLPDSDWQESLEKLKNKYR EHHHHHHHHEEECCEEEEECCCCCEEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MVMSKEKALIEIRLAGLAQGTHEFDFTCKAADFADPALAGAGFSRDVSVNVSVEKLDGEM CCCCCCCEEEEEEEECCCCCCCCCCEEEECCCCCCCHHCCCCCCCCEEEEEEEEECCCEE IVTLNTSATANLTCDLCLAPITSELKGSYRIYYGYEQAGEPQEERDEEYRLIDRNTLALD EEEEECCCCCCEEEEEEECCCHHHCCCCEEEEECCCCCCCCHHHCCCCEEEEECCEEEEE LTEDVRETLLLSVPMKVTCKDNPDCRVFHQEKLSEPGEDHLPDSDWQESLEKLKNKYR EHHHHHHHHEEECCEEEEECCCCCEEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA