| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is rpmF [H]
Identifier: 21674921
GI number: 21674921
Start: 1999192
End: 1999383
Strand: Direct
Name: rpmF [H]
Synonym: CT2112
Alternate gene names: 21674921
Gene position: 1999192-1999383 (Clockwise)
Preceding gene: 21674920
Following gene: 21674922
Centisome position: 92.77
GC content: 61.46
Gene sequence:
>192_bases ATGGCCAACCCGAAAGCCAAGATGTCCAAGTCCAGAAGGGACAAGAGAAGAGCACAGTTCAACGCGCGCACCAAGGCTGC CGTTACGGTTGTCTGTCCGAACTGCGGCGAGCCGACCCTTCCGCATCGCGCCTGCCGTCACTGCGGCCACTACAAAGGCC GTCAGGTCACCGGCAAGAGCGTCGTCGCGTAA
Upstream 100 bases:
>100_bases GAACCGGGCGAAGACCATCTGCCCGACAGCGACTGGCAGGAGTCGCTCGAAAAACTGAAAAACAAGTATCGTTAACCGTT GATTCTAAACTGAATAGATT
Downstream 100 bases:
>100_bases GCAGTTTCACGTAAACAAGACAGCACCGCCATGTTGACCATTGTCGTGGATGCCATGGGTGGCGACAATGCGCCTGCCTG CGTTGTCGAGGGGGTGATCG
Product: 50S ribosomal protein L32
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 63; Mature: 62
Protein sequence:
>63_residues MANPKAKMSKSRRDKRRAQFNARTKAAVTVVCPNCGEPTLPHRACRHCGHYKGRQVTGKSVVA
Sequences:
>Translated_63_residues MANPKAKMSKSRRDKRRAQFNARTKAAVTVVCPNCGEPTLPHRACRHCGHYKGRQVTGKSVVA >Mature_62_residues ANPKAKMSKSRRDKRRAQFNARTKAAVTVVCPNCGEPTLPHRACRHCGHYKGRQVTGKSVVA
Specific function: Unknown
COG id: COG0333
COG function: function code J; Ribosomal protein L32
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L32P family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002677 - InterPro: IPR011332 [H]
Pfam domain/function: PF01783 Ribosomal_L32p [H]
EC number: NA
Molecular weight: Translated: 6963; Mature: 6832
Theoretical pI: Translated: 11.63; Mature: 11.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 9.5 %Cys+Met (Translated Protein) 6.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANPKAKMSKSRRDKRRAQFNARTKAAVTVVCPNCGEPTLPHRACRHCGHYKGRQVTGKS CCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCC VVA CCC >Mature Secondary Structure ANPKAKMSKSRRDKRRAQFNARTKAAVTVVCPNCGEPTLPHRACRHCGHYKGRQVTGKS CCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCC VVA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA