| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is pscB
Identifier: 21674829
GI number: 21674829
Start: 1914913
End: 1915608
Strand: Reverse
Name: pscB
Synonym: CT2019
Alternate gene names: NA
Gene position: 1915608-1914913 (Counterclockwise)
Preceding gene: 21674830
Following gene: 21674828
Centisome position: 88.89
GC content: 57.47
Gene sequence:
>696_bases ATGGCCGAACCTGTTGAAAATAAAAACCAGGCACCAGCTCCGGGAGCGAAAGTTCCGCCGAAAGGCGCTCCGGCGGCTCC GAAAGCCGGAGCACCTGCTGCACCAAAAGGGCCAGTTGCACCGAAGGCAGGAGCACCAGCCGCAAAAACTGGCGCCTCCG CCGCAAAACAAGCAGGGAAGCCAAGGCTTGCTTCGCTGGGGGTGACTCTTGGGCGTTCCGGTGTTCGTCAGGAGTCTGCG CTTCCATATGTCAAGCCGAAAGCGGTGCCGCCTCCGAAACCGGCAGCACCGGCCGCTAAAGGCGCGCCGGCTCCCAAAGG TGCTCCTGCAGCTCCCGCGGCAAAAGCTGCGCCGGGTGCTCCGGTAGCCAAAGCTGCTCCGAAAGCCAAGAAGCATTACT TCATTATCGAGAACCTCTGCGTTGGTTGCGGCTTGTGTCTCGACAAATGTCCGCCAAAGGTCAATGCCATCGGATACAAA TTCTATGGCGATGTTCAGGAAGGCGGCTTCAGATGCTATATCGATCAGGCGGCTTGCATTTCCTGCTCGGCATGTTTTTC AGGAGATGAGTGCCCATCTGGCGCACTGATCGAAGTTCTTCCTGACGGCGAAGTGCTTGATTTTTCCTATACGCCTCCGG AAAGGCTTGATTTCGATCTCCGTTTCCTGCACCGTTTCCATCGCGAAGCCAGATAG
Upstream 100 bases:
>100_bases ATGATTGCGTAACATTTCGGTACGAAGGGGCTTATGCCCCTTCGGCCATCTTGAGCAATAACGTTTACCACGTAAAACAA TTTTAGAGAGGGGGGTTTGT
Downstream 100 bases:
>100_bases TCAGGAATCGTATTCCGAAGCCCACAAAAATGAAAAAGCATTGCTTTGCAAAAAGGCAATGCTTTTTTTATTTGATTCAA GTCCAGTTCTGTTAATTCGC
Product: photosystem P840 reaction center iron-sulfur protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MAEPVENKNQAPAPGAKVPPKGAPAAPKAGAPAAPKGPVAPKAGAPAAKTGASAAKQAGKPRLASLGVTLGRSGVRQESA LPYVKPKAVPPPKPAAPAAKGAPAPKGAPAAPAAKAAPGAPVAKAAPKAKKHYFIIENLCVGCGLCLDKCPPKVNAIGYK FYGDVQEGGFRCYIDQAACISCSACFSGDECPSGALIEVLPDGEVLDFSYTPPERLDFDLRFLHRFHREAR
Sequences:
>Translated_231_residues MAEPVENKNQAPAPGAKVPPKGAPAAPKAGAPAAPKGPVAPKAGAPAAKTGASAAKQAGKPRLASLGVTLGRSGVRQESA LPYVKPKAVPPPKPAAPAAKGAPAPKGAPAAPAAKAAPGAPVAKAAPKAKKHYFIIENLCVGCGLCLDKCPPKVNAIGYK FYGDVQEGGFRCYIDQAACISCSACFSGDECPSGALIEVLPDGEVLDFSYTPPERLDFDLRFLHRFHREAR >Mature_230_residues AEPVENKNQAPAPGAKVPPKGAPAAPKAGAPAAPKGPVAPKAGAPAAKTGASAAKQAGKPRLASLGVTLGRSGVRQESAL PYVKPKAVPPPKPAAPAAKGAPAPKGAPAAPAAKAAPGAPVAKAAPKAKKHYFIIENLCVGCGLCLDKCPPKVNAIGYKF YGDVQEGGFRCYIDQAACISCSACFSGDECPSGALIEVLPDGEVLDFSYTPPERLDFDLRFLHRFHREAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23506; Mature: 23375
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEPVENKNQAPAPGAKVPPKGAPAAPKAGAPAAPKGPVAPKAGAPAAKTGASAAKQAGK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC PRLASLGVTLGRSGVRQESALPYVKPKAVPPPKPAAPAAKGAPAPKGAPAAPAAKAAPGA CCHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PVAKAAPKAKKHYFIIENLCVGCGLCLDKCPPKVNAIGYKFYGDVQEGGFRCYIDQAACI CHHHCCCCCHHCEEEHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEECCCCHH SCSACFSGDECPSGALIEVLPDGEVLDFSYTPPERLDFDLRFLHRFHREAR HHHHHCCCCCCCCCCEEEEECCCCEEEECCCCHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure AEPVENKNQAPAPGAKVPPKGAPAAPKAGAPAAPKGPVAPKAGAPAAKTGASAAKQAGK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC PRLASLGVTLGRSGVRQESALPYVKPKAVPPPKPAAPAAKGAPAPKGAPAAPAAKAAPGA CCHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PVAKAAPKAKKHYFIIENLCVGCGLCLDKCPPKVNAIGYKFYGDVQEGGFRCYIDQAACI CHHHCCCCCHHCEEEHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEECCCCHH SCSACFSGDECPSGALIEVLPDGEVLDFSYTPPERLDFDLRFLHRFHREAR HHHHHCCCCCCCCCCEEEEECCCCEEEECCCCHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA