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The map label for this gene is ybfF [C]

Identifier: 21674828

GI number: 21674828

Start: 1914042

End: 1914770

Strand: Reverse

Name: ybfF [C]

Synonym: CT2018

Alternate gene names: 21674828

Gene position: 1914770-1914042 (Counterclockwise)

Preceding gene: 21674829

Following gene: 21674826

Centisome position: 88.85

GC content: 49.79

Gene sequence:

>729_bases
ATGCTCATCGTGAAAACACTGGTCATCATACCGACTTACAACGAAGCGGAAAACATAAGGCCTCTTGTCGAGGATATTCT
CGATCGTTATCCGGAGGGGCTAGAGCTTCTCGTTATTGATGACAGTTCTCCGGATGGTACAGCCGGTATTGTCAAGGCGA
TCATGAAAAATGAGCCGCGCGTCATGCTTTTGTCAAGACCGTCGAAATTGGGGCTTGGCACGGCCTATCTCACGGGGTTT
CGCTATGCACTCGAACGTGGGTATGAGCGCGTCATCGAGATGGATGCCGATTTTTCGCATGATCCGGCCTCGATTGCATC
TCTGATCAAAGCCATGGATGGCGCGGATATGGTTATTGGATCAAGGTACATGAACAACACGGTCAACGTGGTCAACTGGC
CGTTGTCGCGCCTTATCCTTTCCAAGTCAGCCAGTATTTACAGCAGATGGATCACCGGTATGCCGGTATCCGATCCAACC
AGCGGGTTCAAATGCATCAGTGCCAAGGCGCTGCGATTCATAGCGCTTGACAGGGTGCGTTCACAAGGCTACTCCTTTCA
GATCGAGATCGATTTTCGGGTATGGAAAAAAAACCTCGTTATCCATGAGGTGCCGATCATTTTTGTTGACAGAAGCGTAG
GCAAATCGAAAATGACCAGGAAAAATATTGTTGAGGCGGTCTGGATGGTCTGGTGGCTGAAATTCCTTTCGATCATCGGG
CGGCTTTGA

Upstream 100 bases:

>100_bases
GCTTTGCAAAAAGGCAATGCTTTTTTTATTTGATTCAAGTCCAGTTCTGTTAATTCGCAGCAACGTGCAGGATCAGGCAG
TACAGGCCAGAAAGAATAAA

Downstream 100 bases:

>100_bases
AGTGGCGAGTGACGTTCGGGGTTGACTTTGGTTGTAGAAAACGCAGATCGATACACAAAATGGTTTCAGTGTTTTCATTG
GAACTGACATACATGCTTTC

Product: dolichol-phosphate mannosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MLIVKTLVIIPTYNEAENIRPLVEDILDRYPEGLELLVIDDSSPDGTAGIVKAIMKNEPRVMLLSRPSKLGLGTAYLTGF
RYALERGYERVIEMDADFSHDPASIASLIKAMDGADMVIGSRYMNNTVNVVNWPLSRLILSKSASIYSRWITGMPVSDPT
SGFKCISAKALRFIALDRVRSQGYSFQIEIDFRVWKKNLVIHEVPIIFVDRSVGKSKMTRKNIVEAVWMVWWLKFLSIIG
RL

Sequences:

>Translated_242_residues
MLIVKTLVIIPTYNEAENIRPLVEDILDRYPEGLELLVIDDSSPDGTAGIVKAIMKNEPRVMLLSRPSKLGLGTAYLTGF
RYALERGYERVIEMDADFSHDPASIASLIKAMDGADMVIGSRYMNNTVNVVNWPLSRLILSKSASIYSRWITGMPVSDPT
SGFKCISAKALRFIALDRVRSQGYSFQIEIDFRVWKKNLVIHEVPIIFVDRSVGKSKMTRKNIVEAVWMVWWLKFLSIIG
RL
>Mature_242_residues
MLIVKTLVIIPTYNEAENIRPLVEDILDRYPEGLELLVIDDSSPDGTAGIVKAIMKNEPRVMLLSRPSKLGLGTAYLTGF
RYALERGYERVIEMDADFSHDPASIASLIKAMDGADMVIGSRYMNNTVNVVNWPLSRLILSKSASIYSRWITGMPVSDPT
SGFKCISAKALRFIALDRVRSQGYSFQIEIDFRVWKKNLVIHEVPIIFVDRSVGKSKMTRKNIVEAVWMVWWLKFLSIIG
RL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4503363, Length=227, Percent_Identity=37.0044052863436, Blast_Score=130, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI71999402, Length=235, Percent_Identity=38.2978723404255, Blast_Score=136, Evalue=9e-33,
Organism=Saccharomyces cerevisiae, GI6325441, Length=225, Percent_Identity=31.1111111111111, Blast_Score=102, Evalue=5e-23,
Organism=Drosophila melanogaster, GI24585265, Length=237, Percent_Identity=35.8649789029536, Blast_Score=124, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 27387; Mature: 27387

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIVKTLVIIPTYNEAENIRPLVEDILDRYPEGLELLVIDDSSPDGTAGIVKAIMKNEPR
CEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHCCCCC
VMLLSRPSKLGLGTAYLTGFRYALERGYERVIEMDADFSHDPASIASLIKAMDGADMVIG
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEC
SRYMNNTVNVVNWPLSRLILSKSASIYSRWITGMPVSDPTSGFKCISAKALRFIALDRVR
HHHHCCCCEEEHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
SQGYSFQIEIDFRVWKKNLVIHEVPIIFVDRSVGKSKMTRKNIVEAVWMVWWLKFLSIIG
HCCCEEEEEEEEEEECCCEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
RL
CC
>Mature Secondary Structure
MLIVKTLVIIPTYNEAENIRPLVEDILDRYPEGLELLVIDDSSPDGTAGIVKAIMKNEPR
CEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHCCCCC
VMLLSRPSKLGLGTAYLTGFRYALERGYERVIEMDADFSHDPASIASLIKAMDGADMVIG
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEC
SRYMNNTVNVVNWPLSRLILSKSASIYSRWITGMPVSDPTSGFKCISAKALRFIALDRVR
HHHHCCCCEEEHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
SQGYSFQIEIDFRVWKKNLVIHEVPIIFVDRSVGKSKMTRKNIVEAVWMVWWLKFLSIIG
HCCCEEEEEEEEEEECCCEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
RL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]