| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is bchK [H]
Identifier: 21674803
GI number: 21674803
Start: 1888862
End: 1889938
Strand: Reverse
Name: bchK [H]
Synonym: CT1992
Alternate gene names: 21674803
Gene position: 1889938-1888862 (Counterclockwise)
Preceding gene: 21674804
Following gene: 21674802
Centisome position: 87.7
GC content: 54.97
Gene sequence:
>1077_bases ATGGTGCGGAATATCTCCTCGCCGGAGGCTCACACAGTCATTTTCAACCGGCCCGGAGCCGTTTTCACTATCTCATCAGT CATGTCAGTTGCAAGCCAAGGATTGGTCGATAAAGTAAAAGCCCATCTCGAACTGCTCGATCCCGTCACCTGGATCAGCG TTTTTCCTTGCCTCGCCGGGGGAGTCATGGCATCCGGAGCGATGCAGCCCACCGTGCACGACTACCTGCTGCTCGCGGCG CTTTTTTTGCTCTACGGCCCACTTGGAACCGGCTTTAGCCAGTCGGTGAACGACTACTACGATCTCGAACTCGACCGGGT CAACGAGCCGACCCGCCCTATTCCGTCGGGAAGGCTGTCGGAAAAAGAGGCAATCTGGAACTGGAGCATCGTGCTGGTGA TTGCTGTGGCACTGAGCAGCTGGATCGGCACGAGCATCGGCGGCCAGCGCGGCATGATTTTCGTTGGTTCGCTCCTGGCC GGCCTTGTCATTGGTTATCTCTACTCCGCGCCTCCTTTCAAGCTCAAGAAAAACATCTTCTTTTCCGCTCCAGCGGTCGG CTTTTCCTACGGCTTTATCACCTATCTTTCGGCCAATGCGCTTTTCAGCGATATTCGCCCCGAGGTGCTCTGGCTTGCCG GACTTAATTTCTTCATGGCCGTGGCGCTCATCGTCATGAACGACTTCAAGTCGCAGGAGGGTGATGCCAAAGAAGGCATG AAGTCCCTGACCGTCATGATTGGCGCGAAGAACACCTTTCTTGTCGCCTTCATCATCATCGACCTGGTGTTCGCCGTCTT CGCGTGGCGCTCATACATGTGGGGGTTCACGACCCTGATGTACTTTATCATTGCAGGACTTGTACTGAACATCATCATTC AGATTCCGATCTATCGCGACCCCAAATCGGGCATTACACTGGTGCAGCACGCCGTTGACGACGGCTTCGGCAACGCTATC GGCAAGAGCGAGGTACAGGAGCACAACGCATTCCTGCGGTTCCAGGTGGTTAACAACATTCTGTTTCTGACCAACCAGAT GTTTGCCGCCGCGCTGATTGGCGCAAAGTACATGTGA
Upstream 100 bases:
>100_bases CGGTCACCCAACGGGCGGGCACTTCCTTCATAATTGTTCCCGATATGATGTTATTATTTCTGCGGGATTTGTAAATTTAC GCAACATATAGAGGAGCATC
Downstream 100 bases:
>100_bases GCTTTCCGAAGGTGGCAGGTGGATTGCGATTACTCGTTCCGCCTGCCGGTTCTAATGAATACCGGGCGAAAAAACGATGA CGATACCCCGCACGAACATC
Product: bacteriochlorophyll c synthase
Products: NA
Alternate protein names: Geranylgeranyl bacteriochlorophyll synthase [H]
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MVRNISSPEAHTVIFNRPGAVFTISSVMSVASQGLVDKVKAHLELLDPVTWISVFPCLAGGVMASGAMQPTVHDYLLLAA LFLLYGPLGTGFSQSVNDYYDLELDRVNEPTRPIPSGRLSEKEAIWNWSIVLVIAVALSSWIGTSIGGQRGMIFVGSLLA GLVIGYLYSAPPFKLKKNIFFSAPAVGFSYGFITYLSANALFSDIRPEVLWLAGLNFFMAVALIVMNDFKSQEGDAKEGM KSLTVMIGAKNTFLVAFIIIDLVFAVFAWRSYMWGFTTLMYFIIAGLVLNIIIQIPIYRDPKSGITLVQHAVDDGFGNAI GKSEVQEHNAFLRFQVVNNILFLTNQMFAAALIGAKYM
Sequences:
>Translated_358_residues MVRNISSPEAHTVIFNRPGAVFTISSVMSVASQGLVDKVKAHLELLDPVTWISVFPCLAGGVMASGAMQPTVHDYLLLAA LFLLYGPLGTGFSQSVNDYYDLELDRVNEPTRPIPSGRLSEKEAIWNWSIVLVIAVALSSWIGTSIGGQRGMIFVGSLLA GLVIGYLYSAPPFKLKKNIFFSAPAVGFSYGFITYLSANALFSDIRPEVLWLAGLNFFMAVALIVMNDFKSQEGDAKEGM KSLTVMIGAKNTFLVAFIIIDLVFAVFAWRSYMWGFTTLMYFIIAGLVLNIIIQIPIYRDPKSGITLVQHAVDDGFGNAI GKSEVQEHNAFLRFQVVNNILFLTNQMFAAALIGAKYM >Mature_358_residues MVRNISSPEAHTVIFNRPGAVFTISSVMSVASQGLVDKVKAHLELLDPVTWISVFPCLAGGVMASGAMQPTVHDYLLLAA LFLLYGPLGTGFSQSVNDYYDLELDRVNEPTRPIPSGRLSEKEAIWNWSIVLVIAVALSSWIGTSIGGQRGMIFVGSLLA GLVIGYLYSAPPFKLKKNIFFSAPAVGFSYGFITYLSANALFSDIRPEVLWLAGLNFFMAVALIVMNDFKSQEGDAKEGM KSLTVMIGAKNTFLVAFIIIDLVFAVFAWRSYMWGFTTLMYFIIAGLVLNIIIQIPIYRDPKSGITLVQHAVDDGFGNAI GKSEVQEHNAFLRFQVVNNILFLTNQMFAAALIGAKYM
Specific function: Catalyzes the esterification of bacteriochlorophyllide a by geranylgeraniol-PPi [H]
COG id: COG0382
COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006372 - InterPro: IPR000537 [H]
Pfam domain/function: PF01040 UbiA [H]
EC number: NA
Molecular weight: Translated: 39240; Mature: 39240
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRNISSPEAHTVIFNRPGAVFTISSVMSVASQGLVDKVKAHLELLDPVTWISVFPCLAG CCCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVMASGAMQPTVHDYLLLAALFLLYGPLGTGFSQSVNDYYDLELDRVNEPTRPIPSGRLS HHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCEECCCCCCCCCCCCCCCC EKEAIWNWSIVLVIAVALSSWIGTSIGGQRGMIFVGSLLAGLVIGYLYSAPPFKLKKNIF CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCEE FSAPAVGFSYGFITYLSANALFSDIRPEVLWLAGLNFFMAVALIVMNDFKSQEGDAKEGM EECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH KSLTVMIGAKNTFLVAFIIIDLVFAVFAWRSYMWGFTTLMYFIIAGLVLNIIIQIPIYRD HHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEC PKSGITLVQHAVDDGFGNAIGKSEVQEHNAFLRFQVVNNILFLTNQMFAAALIGAKYM CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVRNISSPEAHTVIFNRPGAVFTISSVMSVASQGLVDKVKAHLELLDPVTWISVFPCLAG CCCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVMASGAMQPTVHDYLLLAALFLLYGPLGTGFSQSVNDYYDLELDRVNEPTRPIPSGRLS HHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCEECCCCCCCCCCCCCCCC EKEAIWNWSIVLVIAVALSSWIGTSIGGQRGMIFVGSLLAGLVIGYLYSAPPFKLKKNIF CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCEE FSAPAVGFSYGFITYLSANALFSDIRPEVLWLAGLNFFMAVALIVMNDFKSQEGDAKEGM EECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH KSLTVMIGAKNTFLVAFIIIDLVFAVFAWRSYMWGFTTLMYFIIAGLVLNIIIQIPIYRD HHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEC PKSGITLVQHAVDDGFGNAIGKSEVQEHNAFLRFQVVNNILFLTNQMFAAALIGAKYM CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10648776 [H]