Click here to switch to the map view.

The map label for this gene is pyrDII [H]

Identifier: 21674758

GI number: 21674758

Start: 1838116

End: 1838910

Strand: Direct

Name: pyrDII [H]

Synonym: CT1946

Alternate gene names: 21674758

Gene position: 1838116-1838910 (Clockwise)

Preceding gene: 21674756

Following gene: 21674759

Centisome position: 85.3

GC content: 60.63

Gene sequence:

>795_bases
ATGCTTCAAACCAGCGCTATTTCCGACGTCAGAACCCGCATTTCAGCCATCCGGCCTGCTGGAGCTGGCGTTTCGATCCT
GTCGATGCCGTGCCCCAAAATCGCCGCTGCCGCAAAGCCGGGCAACTTCGTCAATATCAAGATCAACGCCGCCGATCAGC
CGCTGCTCAGGCGTCCCTTCTGTATCCATAACGTGCAGGGCGACATCATCGATGTCATGGTCAAGAACGTCGGAAGAGGC
ACCGCGCTGCTCTGCGAAGCATCCTGCGGAGAGAGCCTCTTGGTGCTCGGCCCACTCGGCAACTCTTTCGGCACCGGCAC
CGGAGATTTCGATACCGCCCTGCTGGTATCCGGCGGCATTGGCACCGCGCCGATGCTGTTCCTCGAAAAAACACTGGCCG
CAGCTGGCATTCCATTCCATCACCTGGTGGGTGGCCGGAGCCGTTCCGATCTCCTGACCACCAGCCTGTCCAACGTCAGC
ACCGCCACCGACGACGGCTCCGAAGGGTTTCACGGCAATGTCGTCCAGCTGCTCGAAAAATATCTGACTGAACAAACGGA
CGCCGGACGGGTCAAGGTGTTCGCCTGCGGCCCCAATCCGATGCTCAAGGCGCTCGCCAGCTTCTGCCGTGCTCGCGCCT
TTCCGTGCGAGCTGTCGCTCGAGTCGATCATGGGTTGCGGCGTCGGTATCTGCTACGGCTGCATGGTCGAACTCAGCAAC
GCCGATGGGGAAAAGGAGAGCATTCTGCTTTGCCGAGAAGGGCCCGTCATCGACGGCAACCGATTCACCACCTGA

Upstream 100 bases:

>100_bases
GGGACTCTTAATTATTGTCAAATACTTTTCAAAAGCGGGACGGCTGTAGACCAAAATTGCTCCGCTCGTCTGAAAACCGC
AATCCGAAACGCTCGCACCC

Downstream 100 bases:

>100_bases
CTTGAACAATAACAAATAATCATGTAGCTTGTTGTGGGCGAAACCAACAACAAGAAAATTGCATAAATCCCGCACCATAC
TATGGCAAGAGGCTTGAACA

Product: dihydroorotate dehydrogenase, electron transfer subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MLQTSAISDVRTRISAIRPAGAGVSILSMPCPKIAAAAKPGNFVNIKINAADQPLLRRPFCIHNVQGDIIDVMVKNVGRG
TALLCEASCGESLLVLGPLGNSFGTGTGDFDTALLVSGGIGTAPMLFLEKTLAAAGIPFHHLVGGRSRSDLLTTSLSNVS
TATDDGSEGFHGNVVQLLEKYLTEQTDAGRVKVFACGPNPMLKALASFCRARAFPCELSLESIMGCGVGICYGCMVELSN
ADGEKESILLCREGPVIDGNRFTT

Sequences:

>Translated_264_residues
MLQTSAISDVRTRISAIRPAGAGVSILSMPCPKIAAAAKPGNFVNIKINAADQPLLRRPFCIHNVQGDIIDVMVKNVGRG
TALLCEASCGESLLVLGPLGNSFGTGTGDFDTALLVSGGIGTAPMLFLEKTLAAAGIPFHHLVGGRSRSDLLTTSLSNVS
TATDDGSEGFHGNVVQLLEKYLTEQTDAGRVKVFACGPNPMLKALASFCRARAFPCELSLESIMGCGVGICYGCMVELSN
ADGEKESILLCREGPVIDGNRFTT
>Mature_264_residues
MLQTSAISDVRTRISAIRPAGAGVSILSMPCPKIAAAAKPGNFVNIKINAADQPLLRRPFCIHNVQGDIIDVMVKNVGRG
TALLCEASCGESLLVLGPLGNSFGTGTGDFDTALLVSGGIGTAPMLFLEKTLAAAGIPFHHLVGGRSRSDLLTTSLSNVS
TATDDGSEGFHGNVVQLLEKYLTEQTDAGRVKVFACGPNPMLKALASFCRARAFPCELSLESIMGCGVGICYGCMVELSN
ADGEKESILLCREGPVIDGNRFTT

Specific function: Is responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the pyrD subunit to the ultimate electron acceptor NAD(+) [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012165
- InterPro:   IPR019480
- InterPro:   IPR017927
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR017938 [H]

Pfam domain/function: PF10418 DHODB_Fe-S_bind; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: NA

Molecular weight: Translated: 27562; Mature: 27562

Theoretical pI: Translated: 6.49; Mature: 6.49

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQTSAISDVRTRISAIRPAGAGVSILSMPCPKIAAAAKPGNFVNIKINAADQPLLRRPF
CCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHCCCCCCEEEEEEECCCCCHHHCCC
CIHNVQGDIIDVMVKNVGRGTALLCEASCGESLLVLGPLGNSFGTGTGDFDTALLVSGGI
EEECCCCHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCC
GTAPMLFLEKTLAAAGIPFHHLVGGRSRSDLLTTSLSNVSTATDDGSEGFHGNVVQLLEK
CHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
YLTEQTDAGRVKVFACGPNPMLKALASFCRARAFPCELSLESIMGCGVGICYGCMVELSN
HHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHEEECC
ADGEKESILLCREGPVIDGNRFTT
CCCCCCEEEEECCCCEECCCCCCC
>Mature Secondary Structure
MLQTSAISDVRTRISAIRPAGAGVSILSMPCPKIAAAAKPGNFVNIKINAADQPLLRRPF
CCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHCCCCCCEEEEEEECCCCCHHHCCC
CIHNVQGDIIDVMVKNVGRGTALLCEASCGESLLVLGPLGNSFGTGTGDFDTALLVSGGI
EEECCCCHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCC
GTAPMLFLEKTLAAAGIPFHHLVGGRSRSDLLTTSLSNVSTATDDGSEGFHGNVVQLLEK
CHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
YLTEQTDAGRVKVFACGPNPMLKALASFCRARAFPCELSLESIMGCGVGICYGCMVELSN
HHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHEEECC
ADGEKESILLCREGPVIDGNRFTT
CCCCCCEEEEECCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA