| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674723
Identifier: 21674723
GI number: 21674723
Start: 1806850
End: 1807239
Strand: Direct
Name: 21674723
Synonym: CT1911
Alternate gene names: NA
Gene position: 1806850-1807239 (Clockwise)
Preceding gene: 21674720
Following gene: 21674724
Centisome position: 83.85
GC content: 33.08
Gene sequence:
>390_bases ATGTGTCTGCGGAGCAATGAACCGCCACTTTTGCCAAACCGCTGTTACCAGCAGTATTTCTATTTGTCAATGTCAAAATA TTTTTTAGTTGCAAAACCCGATTTTGGTTCTCCAGTTTCCTTGTCAATGTATGAAATTAGAAGGTGTTTGTGTCTTATTT CAATAACAGTAACTTGCTGTCCGAGTTTGACAAGACCAATTATTTTTGAATTTTTCTTGTCTGAGTACCTTAAATTAACA TTAGTCCTTGCGGTTCTTGTCTTGTTAAGTTTGTTCAGTTCCGATTCAATTTTTGATGAAAATTCTTTACTTATTTTTTC AATTTCTCTTTTGGTTTCTATGATAACTTCAGAATTGCTTTTATCTGTCGGTATAACAAAAGGATTATAG
Upstream 100 bases:
>100_bases TTTGTTTTTTATTATTGCCCATAACGTTTTGCGGCTTGGCGAAGGTGGCGATTTTCACCACAAATGTTGATGCGGAGAAC CAATGTTTGATTAACCACAA
Downstream 100 bases:
>100_bases AATATTAAAAGAAAGCTAATTGTTGAAATTAATTCAAAGATAAACTGTCGAGCCTTATCTGTTTTGGTTTTCCCAAGTAG TCCCAGAAGTTCTGTAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MCLRSNEPPLLPNRCYQQYFYLSMSKYFLVAKPDFGSPVSLSMYEIRRCLCLISITVTCCPSLTRPIIFEFFLSEYLKLT LVLAVLVLLSLFSSDSIFDENSLLIFSISLLVSMITSELLLSVGITKGL
Sequences:
>Translated_129_residues MCLRSNEPPLLPNRCYQQYFYLSMSKYFLVAKPDFGSPVSLSMYEIRRCLCLISITVTCCPSLTRPIIFEFFLSEYLKLT LVLAVLVLLSLFSSDSIFDENSLLIFSISLLVSMITSELLLSVGITKGL >Mature_129_residues MCLRSNEPPLLPNRCYQQYFYLSMSKYFLVAKPDFGSPVSLSMYEIRRCLCLISITVTCCPSLTRPIIFEFFLSEYLKLT LVLAVLVLLSLFSSDSIFDENSLLIFSISLLVSMITSELLLSVGITKGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14599; Mature: 14599
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCLRSNEPPLLPNRCYQQYFYLSMSKYFLVAKPDFGSPVSLSMYEIRRCLCLISITVTCC CCCCCCCCCCCHHHHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHC PSLTRPIIFEFFLSEYLKLTLVLAVLVLLSLFSSDSIFDENSLLIFSISLLVSMITSELL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH LSVGITKGL HHHHHHCCC >Mature Secondary Structure MCLRSNEPPLLPNRCYQQYFYLSMSKYFLVAKPDFGSPVSLSMYEIRRCLCLISITVTCC CCCCCCCCCCCHHHHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHC PSLTRPIIFEFFLSEYLKLTLVLAVLVLLSLFSSDSIFDENSLLIFSISLLVSMITSELL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH LSVGITKGL HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA