| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is pcaD [H]
Identifier: 21674720
GI number: 21674720
Start: 1804908
End: 1805678
Strand: Direct
Name: pcaD [H]
Synonym: CT1908
Alternate gene names: 21674720
Gene position: 1804908-1805678 (Clockwise)
Preceding gene: 21674719
Following gene: 21674723
Centisome position: 83.76
GC content: 62.52
Gene sequence:
>771_bases ATGCTGACGTTCAATGGAGCAGCGGGCGGTGACGCCGGTAATGTTTTGCTATTGCACGCCTTCCCGGTCTCGTCGCAGAT GTGGGAGCCGCAGCTCGCGCCGCTGGCCGAGTCGGGCTACCGGGTGATCGCCCCCGCCGTGTACGGATTCGAGTCAACGC CGTCACGCCCCGGCTGGAGCATGGATGATTACGCGCACGACCTCGCCCGCCTCATGGAAGCGCTCGGCTGGAAGAGCGCG ACCATCGTTGGCCTCTCGATGGGCGGCTATCAGGCGATGGCCTTCTACCGGCTCTACCCGGAGCTGACAAAATCGCTGGT GCTCTGCGACACGCGCGCCAACGCCGACACGCCGCAGGCTTTCTCCGTACGGCAGGAGTTTCGGAAAGCGGTGATGGAGA AAGGAGCCGAAGAGGCGGCGGCGAGGATGGTGCCGAACTTCTTCGCCAAGGAGACCTACGAATCGAACCCATCGCTCGTC GAGAAAACGCGGGAGAGCATCGTCCGCCAGGCGCCGGAGGAGATCAGCGAAGCGATGCGGGCGATCGCCGAACGCGAAGA CTCGACAGAAATGCTGACCGAAATCACCTGCCCGACGCTTATCGTCAACGGCATGGAAGACATCGTCACCACGCCGGAAA TCGCCGCCACCATGCACGCCCTGATTCCCGGCTCGAAGCTCGAACTGATTCCCGACGCGGGCCACCTCTCAAACCTCGAC CAACCCGCGATCTTCAACGGAATTCTGCTGGAGCATTTGCGGAGTTTGTAA
Upstream 100 bases:
>100_bases CGACAGCGCCCGTGACGAGGCCCGCAAGATTCTCGATGAGGCCAACAACATCATCCGCGACATTCGCGGCAGCCAGGCCA AAGCGCAGGAGAACTAAGTC
Downstream 100 bases:
>100_bases AAAAGGAAACCCTCAACCGGTGCGAACTTGTTGGGGGGGGGGTTGATTTTCATCTCCTGTACAGCGAACATTCTAACGCT AAAAATACTTATTTATTATA
Product: 3-oxoadipate enol-lactonase, putative
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase I; Beta-ketoadipate enol-lactone hydrolase I; Enol-lactone hydrolase I [H]
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MLTFNGAAGGDAGNVLLLHAFPVSSQMWEPQLAPLAESGYRVIAPAVYGFESTPSRPGWSMDDYAHDLARLMEALGWKSA TIVGLSMGGYQAMAFYRLYPELTKSLVLCDTRANADTPQAFSVRQEFRKAVMEKGAEEAAARMVPNFFAKETYESNPSLV EKTRESIVRQAPEEISEAMRAIAEREDSTEMLTEITCPTLIVNGMEDIVTTPEIAATMHALIPGSKLELIPDAGHLSNLD QPAIFNGILLEHLRSL
Sequences:
>Translated_256_residues MLTFNGAAGGDAGNVLLLHAFPVSSQMWEPQLAPLAESGYRVIAPAVYGFESTPSRPGWSMDDYAHDLARLMEALGWKSA TIVGLSMGGYQAMAFYRLYPELTKSLVLCDTRANADTPQAFSVRQEFRKAVMEKGAEEAAARMVPNFFAKETYESNPSLV EKTRESIVRQAPEEISEAMRAIAEREDSTEMLTEITCPTLIVNGMEDIVTTPEIAATMHALIPGSKLELIPDAGHLSNLD QPAIFNGILLEHLRSL >Mature_256_residues MLTFNGAAGGDAGNVLLLHAFPVSSQMWEPQLAPLAESGYRVIAPAVYGFESTPSRPGWSMDDYAHDLARLMEALGWKSA TIVGLSMGGYQAMAFYRLYPELTKSLVLCDTRANADTPQAFSVRQEFRKAVMEKGAEEAAARMVPNFFAKETYESNPSLV EKTRESIVRQAPEEISEAMRAIAEREDSTEMLTEITCPTLIVNGMEDIVTTPEIAATMHALIPGSKLELIPDAGHLSNLD QPAIFNGILLEHLRSL
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787244, Length=246, Percent_Identity=25.609756097561, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI87081721, Length=267, Percent_Identity=25.4681647940075, Blast_Score=66, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 28024; Mature: 28024
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTFNGAAGGDAGNVLLLHAFPVSSQMWEPQLAPLAESGYRVIAPAVYGFESTPSRPGWS CEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHCCCEEEEHHHHCCCCCCCCCCCC MDDYAHDLARLMEALGWKSATIVGLSMGGYQAMAFYRLYPELTKSLVLCDTRANADTPQA HHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCHH FSVRQEFRKAVMEKGAEEAAARMVPNFFAKETYESNPSLVEKTRESIVRQAPEEISEAMR HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHH AIAEREDSTEMLTEITCPTLIVNGMEDIVTTPEIAATMHALIPGSKLELIPDAGHLSNLD HHHHCCCHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHCCCCCEEECCCCCCCCCCC QPAIFNGILLEHLRSL CCHHHHHHHHHHHHCC >Mature Secondary Structure MLTFNGAAGGDAGNVLLLHAFPVSSQMWEPQLAPLAESGYRVIAPAVYGFESTPSRPGWS CEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHCCCEEEEHHHHCCCCCCCCCCCC MDDYAHDLARLMEALGWKSATIVGLSMGGYQAMAFYRLYPELTKSLVLCDTRANADTPQA HHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCHH FSVRQEFRKAVMEKGAEEAAARMVPNFFAKETYESNPSLVEKTRESIVRQAPEEISEAMR HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHH AIAEREDSTEMLTEITCPTLIVNGMEDIVTTPEIAATMHALIPGSKLELIPDAGHLSNLD HHHHCCCHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHCCCCCEEECCCCCCCCCCC QPAIFNGILLEHLRSL CCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8181753 [H]