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The map label for this gene is ygdQ [C]

Identifier: 21674699

GI number: 21674699

Start: 1786476

End: 1787231

Strand: Direct

Name: ygdQ [C]

Synonym: CT1887

Alternate gene names: 21674699

Gene position: 1786476-1787231 (Clockwise)

Preceding gene: 21674696

Following gene: 21674702

Centisome position: 82.9

GC content: 60.05

Gene sequence:

>756_bases
ATGGAATGGATTTTCAGCCCGGAGGCGTGGATCGCGCTCTTGACGCTGACGACGCTTGAAATCGTCCTCGGCATCGACAA
TATCATTTTTCTGACGATCATTGTGAGCCGGATGCCCGCCAAGCAGCAGAAACCGGGACGCATACTCGGCCTCGGGCTGG
CCATGCTTAGCCGCATCGCGCTCCTGCTCTCGATCACTTGGGTCATGCGCCTCACCAACGAGCTGTTCACCGCTTTCGGC
CACGCCGTCACGGGCCGCGACCTCATCCTGCTCGGCGGCGGCCTGTTCCTGCTCGCAAAAAGCACCCACGAAATTCACCA
AAGCCTCGAAGGCACCGAAGAGGTCGTCAAGGAGCGCTCCGCTTCGAACTTCGTCATGACGCTCATCCAGATCGCCCTCA
TCGACATCGTCTTCTCGCTCGACTCGGTCATTACCGCTGTCGGCCTTGCCAAAGATATTCCGGTCATGATTCTGGCCATC
ATGATAGCCGTGGGCATCATGATGGTGGCCGCGCAAACCATCGGCGAGTTCGTCGAGCGACACCCGACCATCAAGATGCT
CGCCCTGAGCTTTTTGATTCTGGTCGGCGCGACGCTGGTGGCCGAGGGGGCCGGATTCGAGTTTCCGCGCGGCTACATCT
ACTTCGCTATGGCCTTCTCGGTCTCGGTGGAGATGCTCAACCTCCGCCTGCGCAAGAAAGAGGCCGAGCCGCCGGTGCAT
CTGCGCAAGGCGCTGGAGGAGGAAGAGACGCTCTGA

Upstream 100 bases:

>100_bases
CTCAATAATGTGTTCAATCTCCATCATTATGAACCGTAATTTTGCCGATCCGGTTCTGCGGAGGTAACTTCCGGAAAATC
AAACGATAACTCTCGACAAT

Downstream 100 bases:

>100_bases
GCGCGGCTTGAGGGCACCATTTCCGAGCAGTTGAAAGTTCTCTAAAAAAGAGACAACCAGACGCTAACCGTGCGTCCAGA
CAGGCGGCTTTCCGATTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MEWIFSPEAWIALLTLTTLEIVLGIDNIIFLTIIVSRMPAKQQKPGRILGLGLAMLSRIALLLSITWVMRLTNELFTAFG
HAVTGRDLILLGGGLFLLAKSTHEIHQSLEGTEEVVKERSASNFVMTLIQIALIDIVFSLDSVITAVGLAKDIPVMILAI
MIAVGIMMVAAQTIGEFVERHPTIKMLALSFLILVGATLVAEGAGFEFPRGYIYFAMAFSVSVEMLNLRLRKKEAEPPVH
LRKALEEEETL

Sequences:

>Translated_251_residues
MEWIFSPEAWIALLTLTTLEIVLGIDNIIFLTIIVSRMPAKQQKPGRILGLGLAMLSRIALLLSITWVMRLTNELFTAFG
HAVTGRDLILLGGGLFLLAKSTHEIHQSLEGTEEVVKERSASNFVMTLIQIALIDIVFSLDSVITAVGLAKDIPVMILAI
MIAVGIMMVAAQTIGEFVERHPTIKMLALSFLILVGATLVAEGAGFEFPRGYIYFAMAFSVSVEMLNLRLRKKEAEPPVH
LRKALEEEETL
>Mature_251_residues
MEWIFSPEAWIALLTLTTLEIVLGIDNIIFLTIIVSRMPAKQQKPGRILGLGLAMLSRIALLLSITWVMRLTNELFTAFG
HAVTGRDLILLGGGLFLLAKSTHEIHQSLEGTEEVVKERSASNFVMTLIQIALIDIVFSLDSVITAVGLAKDIPVMILAI
MIAVGIMMVAAQTIGEFVERHPTIKMLALSFLILVGATLVAEGAGFEFPRGYIYFAMAFSVSVEMLNLRLRKKEAEPPVH
LRKALEEEETL

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0053 family [H]

Homologues:

Organism=Escherichia coli, GI1789197, Length=232, Percent_Identity=59.9137931034483, Blast_Score=252, Evalue=2e-68,
Organism=Escherichia coli, GI1788119, Length=234, Percent_Identity=45.2991452991453, Blast_Score=219, Evalue=2e-58,
Organism=Escherichia coli, GI87082033, Length=228, Percent_Identity=46.9298245614035, Blast_Score=198, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005496 [H]

Pfam domain/function: PF03741 TerC [H]

EC number: NA

Molecular weight: Translated: 27645; Mature: 27645

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWIFSPEAWIALLTLTTLEIVLGIDNIIFLTIIVSRMPAKQQKPGRILGLGLAMLSRIA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
LLLSITWVMRLTNELFTAFGHAVTGRDLILLGGGLFLLAKSTHEIHQSLEGTEEVVKERS
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHEEECCHHHHHHHHCCHHHHHHHHC
ASNFVMTLIQIALIDIVFSLDSVITAVGLAKDIPVMILAIMIAVGIMMVAAQTIGEFVER
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HPTIKMLALSFLILVGATLVAEGAGFEFPRGYIYFAMAFSVSVEMLNLRLRKKEAEPPVH
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LRKALEEEETL
HHHHHHHHCCC
>Mature Secondary Structure
MEWIFSPEAWIALLTLTTLEIVLGIDNIIFLTIIVSRMPAKQQKPGRILGLGLAMLSRIA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
LLLSITWVMRLTNELFTAFGHAVTGRDLILLGGGLFLLAKSTHEIHQSLEGTEEVVKERS
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHEEECCHHHHHHHHCCHHHHHHHHC
ASNFVMTLIQIALIDIVFSLDSVITAVGLAKDIPVMILAIMIAVGIMMVAAQTIGEFVER
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HPTIKMLALSFLILVGATLVAEGAGFEFPRGYIYFAMAFSVSVEMLNLRLRKKEAEPPVH
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LRKALEEEETL
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]