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The map label for this gene is prtC [C]

Identifier: 21674702

GI number: 21674702

Start: 1789147

End: 1790382

Strand: Direct

Name: prtC [C]

Synonym: CT1890

Alternate gene names: 21674702

Gene position: 1789147-1790382 (Clockwise)

Preceding gene: 21674699

Following gene: 21674703

Centisome position: 83.03

GC content: 62.86

Gene sequence:

>1236_bases
ATGCCCGCCAAGCCTCAACTGATCTCGCCCGCCGGCGACTGGACTTCGATGCGCGCCGCACTCGATGCCGGAGCGGACGC
AGTCTATTTCGGGGCCGAGGGATTCAACATGCGCGCCGCGAGCAAAGGCTTTTCACCAGGCGACTTCGGCGGCATCGCGC
GGCTCTGCCGCAGCCATGGCGCAAAGGCGTACCTCGCGCTGAACTCGGTGATCTACGACGCCGAGCTCGACGAGGTTGAC
CGCACCGCCGCCGCCGCAAAAGCCGCCGGGCTCGACGCCGTGATCTGCTGGGACTTGGCGGTCATCGAGGCGTGCCGCCG
CCACGAGATGCCGATCCACCTCTCGACACAGGCCTCGGTGAGCAACATCAATGCGCTCCGCTTTTACGCCTCACTCGGCG
CGAGGATGATCGTGCTGGCCCGCGAACTGACGCTGGAGCAGACGGCGGCCATCACAAAATGCATCGCCGCCGAAAAGCTG
CCGGTGACAGTCGAGAGCTTCGTGCACGGCGCGATGTGCGTGGCGATCTCCGGGCGCTGCTTCCTCTCACAGGAACTGTT
CGGGCGCTCGGCCAATCGCGGCGAGTGCGTGCAGCCCTGCCGCCGTTCATACCGGATCGCCGACGTCGAGGAGGGCTTCG
AACTGGAACTCGGTTCCAACTATGTGATGAGTCCGAAAGACCTCTGCGCACTGCCGTTCCTCGACAAGCTCTTCGACGCA
GGCATCGGCGCGTTCAAAATCGAAGGCCGCAACCGCAGCCCCGAATACGTCGCCACCACCACCGCCGCTTACCGCAAGGC
CATCGACTTCATCGCGGCGCACCGGAATGACAAGGATTTCGACGAGGCGTACCGCTCGCTGACCGACAGACTTCAGAACG
ATCTCGTGCGGGTTTACAACCGCGGCTTCTCCGAAGGCTTCTTCTTCGGCAAACCGGCGGATGCGTGGACAAAACACTCC
GGATCGGCGGCGACCGAAACCAAGAGTTATGTCGGTGTCGTGCGCAAATACTTCCCTAAAGCAGGCGTGGCGGAAATCCT
CGTCCACGCGCCCAGCGTTGATTCCGGCGTGAGGCTCTCGATTCAGGGCCCGGCGACCGGCCTCGTCACCGTGCCGGACG
CGGAGTTGCACCTCGACGGCCAGCTCGCGAACCGAATCGAACAGGGCCAGATTTTCACCGTCCGGTGCGACCGTGTGCGC
AAAAACGACAAAGTGTATGTTTTGTTAAAAAATTAA

Upstream 100 bases:

>100_bases
GCCGACAAGCAGAGCGGCTGTGAGGCGTTGGTTCATATCGTCAAATGAGTTGTTATATTTTGACCACTAAAGTAACGAAT
AATTCGCTTTTCGCCCCGAC

Downstream 100 bases:

>100_bases
CAACTCGTCTGTTTCCGGTCTCCCCCTTTTGTGTACTTTTACAGAAACGGCCCCAGCTTCACCGCAGATGCGTCGATAGC
GGGCCACGCCAAAACGGGAG

Product: collagenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MPAKPQLISPAGDWTSMRAALDAGADAVYFGAEGFNMRAASKGFSPGDFGGIARLCRSHGAKAYLALNSVIYDAELDEVD
RTAAAAKAAGLDAVICWDLAVIEACRRHEMPIHLSTQASVSNINALRFYASLGARMIVLARELTLEQTAAITKCIAAEKL
PVTVESFVHGAMCVAISGRCFLSQELFGRSANRGECVQPCRRSYRIADVEEGFELELGSNYVMSPKDLCALPFLDKLFDA
GIGAFKIEGRNRSPEYVATTTAAYRKAIDFIAAHRNDKDFDEAYRSLTDRLQNDLVRVYNRGFSEGFFFGKPADAWTKHS
GSAATETKSYVGVVRKYFPKAGVAEILVHAPSVDSGVRLSIQGPATGLVTVPDAELHLDGQLANRIEQGQIFTVRCDRVR
KNDKVYVLLKN

Sequences:

>Translated_411_residues
MPAKPQLISPAGDWTSMRAALDAGADAVYFGAEGFNMRAASKGFSPGDFGGIARLCRSHGAKAYLALNSVIYDAELDEVD
RTAAAAKAAGLDAVICWDLAVIEACRRHEMPIHLSTQASVSNINALRFYASLGARMIVLARELTLEQTAAITKCIAAEKL
PVTVESFVHGAMCVAISGRCFLSQELFGRSANRGECVQPCRRSYRIADVEEGFELELGSNYVMSPKDLCALPFLDKLFDA
GIGAFKIEGRNRSPEYVATTTAAYRKAIDFIAAHRNDKDFDEAYRSLTDRLQNDLVRVYNRGFSEGFFFGKPADAWTKHS
GSAATETKSYVGVVRKYFPKAGVAEILVHAPSVDSGVRLSIQGPATGLVTVPDAELHLDGQLANRIEQGQIFTVRCDRVR
KNDKVYVLLKN
>Mature_410_residues
PAKPQLISPAGDWTSMRAALDAGADAVYFGAEGFNMRAASKGFSPGDFGGIARLCRSHGAKAYLALNSVIYDAELDEVDR
TAAAAKAAGLDAVICWDLAVIEACRRHEMPIHLSTQASVSNINALRFYASLGARMIVLARELTLEQTAAITKCIAAEKLP
VTVESFVHGAMCVAISGRCFLSQELFGRSANRGECVQPCRRSYRIADVEEGFELELGSNYVMSPKDLCALPFLDKLFDAG
IGAFKIEGRNRSPEYVATTTAAYRKAIDFIAAHRNDKDFDEAYRSLTDRLQNDLVRVYNRGFSEGFFFGKPADAWTKHSG
SAATETKSYVGVVRKYFPKAGVAEILVHAPSVDSGVRLSIQGPATGLVTVPDAELHLDGQLANRIEQGQIFTVRCDRVRK
NDKVYVLLKN

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI87081910, Length=316, Percent_Identity=35.126582278481, Blast_Score=177, Evalue=1e-45,
Organism=Escherichia coli, GI1788397, Length=377, Percent_Identity=31.5649867374005, Blast_Score=159, Evalue=4e-40,
Organism=Escherichia coli, GI1789548, Length=298, Percent_Identity=30.5369127516779, Blast_Score=117, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539
- InterPro:   IPR009000 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 44765; Mature: 44634

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAKPQLISPAGDWTSMRAALDAGADAVYFGAEGFNMRAASKGFSPGDFGGIARLCRSHG
CCCCCCEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHCCCCCCCCHHHHHHHHHHCC
AKAYLALNSVIYDAELDEVDRTAAAAKAAGLDAVICWDLAVIEACRRHEMPIHLSTQASV
CEEEEEEEHEEECCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCEEEECCCCH
SNINALRFYASLGARMIVLARELTLEQTAAITKCIAAEKLPVTVESFVHGAMCVAISGRC
HHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCEEEEEECCCE
FLSQELFGRSANRGECVQPCRRSYRIADVEEGFELELGSNYVMSPKDLCALPFLDKLFDA
EECHHHHCCCCCCCHHHHHHHHCCEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHC
GIGAFKIEGRNRSPEYVATTTAAYRKAIDFIAAHRNDKDFDEAYRSLTDRLQNDLVRVYN
CCCEEEECCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
RGFSEGFFFGKPADAWTKHSGSAATETKSYVGVVRKYFPKAGVAEILVHAPSVDSGVRLS
CCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHEEECCCCCCCEEEE
IQGPATGLVTVPDAELHLDGQLANRIEQGQIFTVRCDRVRKNDKVYVLLKN
EECCCCEEEECCCCCEEECHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEC
>Mature Secondary Structure 
PAKPQLISPAGDWTSMRAALDAGADAVYFGAEGFNMRAASKGFSPGDFGGIARLCRSHG
CCCCCEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHCCCCCCCCHHHHHHHHHHCC
AKAYLALNSVIYDAELDEVDRTAAAAKAAGLDAVICWDLAVIEACRRHEMPIHLSTQASV
CEEEEEEEHEEECCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCEEEECCCCH
SNINALRFYASLGARMIVLARELTLEQTAAITKCIAAEKLPVTVESFVHGAMCVAISGRC
HHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCEEEEEECCCE
FLSQELFGRSANRGECVQPCRRSYRIADVEEGFELELGSNYVMSPKDLCALPFLDKLFDA
EECHHHHCCCCCCCHHHHHHHHCCEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHC
GIGAFKIEGRNRSPEYVATTTAAYRKAIDFIAAHRNDKDFDEAYRSLTDRLQNDLVRVYN
CCCEEEECCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
RGFSEGFFFGKPADAWTKHSGSAATETKSYVGVVRKYFPKAGVAEILVHAPSVDSGVRLS
CCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHEEECCCCCCCEEEE
IQGPATGLVTVPDAELHLDGQLANRIEQGQIFTVRCDRVRKNDKVYVLLKN
EECCCCEEEECCCCCEEECHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]