| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is menH [H]
Identifier: 21674658
GI number: 21674658
Start: 1745083
End: 1745910
Strand: Direct
Name: menH [H]
Synonym: CT1845
Alternate gene names: 21674658
Gene position: 1745083-1745910 (Clockwise)
Preceding gene: 21674657
Following gene: 21674659
Centisome position: 80.98
GC content: 58.82
Gene sequence:
>828_bases ATGACCACCATTTCCCTCCACCTCACCACCGTCGGCGACCCGGCGCTACCGAAAATCGTGTTTCTGCACGGCTTCCTCGG CTCAGGAAGCGACTGGCTTTCATTTGCCCGAAAGCTTGAGAATCGCTTTTGCAGCATCCTCGTCGATCTGCCGGGTCATG GTGAGGCGGGAATTCCGGCGGATGGCGATCCGAAGCTGTTTTTCATGCAGACAGTCGAAGCGCTGAAGAGCAATATCCGG CGTTTGCGCGCGGAGCCGTGCGTGCTGGTGGGCTATTCGATGGGCGGCCGGATCGGACTGGCGCTGGCGTTGCTCTATCC GGAGCTGTTCTCGAAGGCGATAATCGTGTCGTCGTCGCCTGGACTACAGACGGACGAAAAGCGAGCATCGCGCCGAAAAA GCGACGAGGGAATCGCCCGCAAGATCGAGCGGAATTTCGAGGGGTTCATCGGGTTCTGGTACGACCAGCCGCTTTTTTCG ACGCTGAAAAGCCACTCGCTGTTCCGCGAGGTCGAGGCGCAACGCAAGCAGGGTACACCGCAAAATCTCGCCCGCGCGCT GCGCCTGCTCGGCACGGGCAATCAGCCATCGTTCTGGGACAAACTCCCCGGCAACCGCCTGCCGATGCTTTTCTGCGTCG GCGAAAAGGATGCAAAGTACGTGGATATCGCAAAGCAGGTGGTTGAACTTTGCCCATCCTCAAGCCTCGAACTCTTCGAA CACTGCGGCCACACGCTGCACATCGAAGAGCCGGAGCGTTTTCTTGCGAGCGTGGAGCGGTTTATCGAAACGCATCCCCA CAACAGCATTTCCCACGATGACCTGTAA
Upstream 100 bases:
>100_bases TGCCCATGAGACTGTGCAGTTTCCGGGTTCAAAAAAAACAGCTCTTTGTGGCGTTGTCATATATTAGCAAAAAAGCGAAC GGCCTGAAATCACCACAGCA
Downstream 100 bases:
>100_bases GTCCCATTCCGCCGTCACGCCTCTCTAATCAACGGGGATTGTTTATATTTCAGCTCTTTTGCCTGTAGAGCCGGGGCAAC GCCGATTTTCATCAACTACC
Product: thioesterase, menaquinone synthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MTTISLHLTTVGDPALPKIVFLHGFLGSGSDWLSFARKLENRFCSILVDLPGHGEAGIPADGDPKLFFMQTVEALKSNIR RLRAEPCVLVGYSMGGRIGLALALLYPELFSKAIIVSSSPGLQTDEKRASRRKSDEGIARKIERNFEGFIGFWYDQPLFS TLKSHSLFREVEAQRKQGTPQNLARALRLLGTGNQPSFWDKLPGNRLPMLFCVGEKDAKYVDIAKQVVELCPSSSLELFE HCGHTLHIEEPERFLASVERFIETHPHNSISHDDL
Sequences:
>Translated_275_residues MTTISLHLTTVGDPALPKIVFLHGFLGSGSDWLSFARKLENRFCSILVDLPGHGEAGIPADGDPKLFFMQTVEALKSNIR RLRAEPCVLVGYSMGGRIGLALALLYPELFSKAIIVSSSPGLQTDEKRASRRKSDEGIARKIERNFEGFIGFWYDQPLFS TLKSHSLFREVEAQRKQGTPQNLARALRLLGTGNQPSFWDKLPGNRLPMLFCVGEKDAKYVDIAKQVVELCPSSSLELFE HCGHTLHIEEPERFLASVERFIETHPHNSISHDDL >Mature_274_residues TTISLHLTTVGDPALPKIVFLHGFLGSGSDWLSFARKLENRFCSILVDLPGHGEAGIPADGDPKLFFMQTVEALKSNIRR LRAEPCVLVGYSMGGRIGLALALLYPELFSKAIIVSSSPGLQTDEKRASRRKSDEGIARKIERNFEGFIGFWYDQPLFST LKSHSLFREVEAQRKQGTPQNLARALRLLGTGNQPSFWDKLPGNRLPMLFCVGEKDAKYVDIAKQVVELCPSSSLELFEH CGHTLHIEEPERFLASVERFIETHPHNSISHDDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lipase/esterase LIP3/BchO family [H]
Homologues:
Organism=Homo sapiens, GI23200008, Length=272, Percent_Identity=26.1029411764706, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI23200012, Length=272, Percent_Identity=26.1029411764706, Blast_Score=73, Evalue=3e-13, Organism=Escherichia coli, GI1788598, Length=253, Percent_Identity=29.6442687747036, Blast_Score=113, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 - InterPro: IPR022485 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 30731; Mature: 30599
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTISLHLTTVGDPALPKIVFLHGFLGSGSDWLSFARKLENRFCSILVDLPGHGEAGIPA CCEEEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCC DGDPKLFFMQTVEALKSNIRRLRAEPCVLVGYSMGGRIGLALALLYPELFSKAIIVSSSP CCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCEEEEECCC GLQTDEKRASRRKSDEGIARKIERNFEGFIGFWYDQPLFSTLKSHSLFREVEAQRKQGTP CCCCHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCH QNLARALRLLGTGNQPSFWDKLPGNRLPMLFCVGEKDAKYVDIAKQVVELCPSSSLELFE HHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHH HCGHTLHIEEPERFLASVERFIETHPHNSISHDDL HCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TTISLHLTTVGDPALPKIVFLHGFLGSGSDWLSFARKLENRFCSILVDLPGHGEAGIPA CEEEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCC DGDPKLFFMQTVEALKSNIRRLRAEPCVLVGYSMGGRIGLALALLYPELFSKAIIVSSSP CCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCEEEEECCC GLQTDEKRASRRKSDEGIARKIERNFEGFIGFWYDQPLFSTLKSHSLFREVEAQRKQGTP CCCCHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCH QNLARALRLLGTGNQPSFWDKLPGNRLPMLFCVGEKDAKYVDIAKQVVELCPSSSLELFE HHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHH HCGHTLHIEEPERFLASVERFIETHPHNSISHDDL HCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8566759; 9387221; 9384377 [H]