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The map label for this gene is 21674651

Identifier: 21674651

GI number: 21674651

Start: 1739319

End: 1739816

Strand: Direct

Name: 21674651

Synonym: CT1837

Alternate gene names: NA

Gene position: 1739319-1739816 (Clockwise)

Preceding gene: 21674650

Following gene: 21674652

Centisome position: 80.71

GC content: 54.62

Gene sequence:

>498_bases
TTGCAACAGACGGTCTGGCAGAACCCCGAAGATGCAAGAGGCTACCTGAACCTCGGCAAGGAGTACGCTCGCCAGCAGCG
TTTTGACGACGCCATCCAGGCTTACCGCAGAGCCATCAAGCTCGAACCCGGTCTCGACGAGGCCTACTCGGCGCTCGGCG
CGGCCTATTTCGACAAGAAAGAGTTTAACGCGGCGCTGCCGTGGATGCAGAAACGGGTTGACATCGCGCCGGACGACTCG
CTCCGCCAGTTCGATCTCGGCAACGTCTATTTCCAGCTCAATCGTTATAACGATGCGGTAGCCTCATACCAGAAGGCGAT
CGATAACAGCTACTCCTTCCAGGAGGCCTGGTACTCGATGGCGGTCTGCTACATTAAAATGGGAAAAATCGATGAAGCCC
GAAAAATCCATAAATGGCTTCAGACCAAAAACAATTATCTTGCCGTCTCCCTTGAGCGGCACCTGCAAAACGATGTGCCT
GACAAGGCCGGAAAATGA

Upstream 100 bases:

>100_bases
CCCATACCGCCTCGTCGCGGCTCTCTTCCGCCCGCTCCTCATTCTGCTTTGCCTTGCCGGACTTTCCGCCTGTAACACCA
GGGAGGCCCGCATCAAGGAG

Downstream 100 bases:

>100_bases
ACCTCGTAATCCCATGCAGGCGGACGACAGTATCCCTATGATGCAAAAGGCGCTTCAACTCCTCGAAGCATCGGTAAAAG
CCGCGATGCGGCAACGAGAC

Product: TPR domain-containing protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; Sulfotransferase; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Domain-Containing Protein; Peptidase S1 And S6 Chymotrypsin/Hap; PDZ/DHR/GLGF Domain Protein; Tetratricopeptide Repeat Protein; TPR Repeats Containing Protein; Glycosyl Transferase Family Protein

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MQQTVWQNPEDARGYLNLGKEYARQQRFDDAIQAYRRAIKLEPGLDEAYSALGAAYFDKKEFNAALPWMQKRVDIAPDDS
LRQFDLGNVYFQLNRYNDAVASYQKAIDNSYSFQEAWYSMAVCYIKMGKIDEARKIHKWLQTKNNYLAVSLERHLQNDVP
DKAGK

Sequences:

>Translated_165_residues
MQQTVWQNPEDARGYLNLGKEYARQQRFDDAIQAYRRAIKLEPGLDEAYSALGAAYFDKKEFNAALPWMQKRVDIAPDDS
LRQFDLGNVYFQLNRYNDAVASYQKAIDNSYSFQEAWYSMAVCYIKMGKIDEARKIHKWLQTKNNYLAVSLERHLQNDVP
DKAGK
>Mature_165_residues
MQQTVWQNPEDARGYLNLGKEYARQQRFDDAIQAYRRAIKLEPGLDEAYSALGAAYFDKKEFNAALPWMQKRVDIAPDDS
LRQFDLGNVYFQLNRYNDAVASYQKAIDNSYSFQEAWYSMAVCYIKMGKIDEARKIHKWLQTKNNYLAVSLERHLQNDVP
DKAGK

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307150, Length=148, Percent_Identity=30.4054054054054, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI32307148, Length=148, Percent_Identity=30.4054054054054, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI115532692, Length=145, Percent_Identity=29.6551724137931, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115532690, Length=145, Percent_Identity=29.6551724137931, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI17647755, Length=148, Percent_Identity=29.7297297297297, Blast_Score=70, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24585827, Length=148, Percent_Identity=29.7297297297297, Blast_Score=70, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24585829, Length=148, Percent_Identity=29.7297297297297, Blast_Score=70, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19261; Mature: 19261

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQTVWQNPEDARGYLNLGKEYARQQRFDDAIQAYRRAIKLEPGLDEAYSALGAAYFDKK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
EFNAALPWMQKRVDIAPDDSLRQFDLGNVYFQLNRYNDAVASYQKAIDNSYSFQEAWYSM
HHHHHHHHHHHHCCCCCCCCCHHCCCCCEEEEEECHHHHHHHHHHHHCCCCHHHHHHHHH
AVCYIKMGKIDEARKIHKWLQTKNNYLAVSLERHLQNDVPDKAGK
HHHHHHCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCCCCCC
>Mature Secondary Structure
MQQTVWQNPEDARGYLNLGKEYARQQRFDDAIQAYRRAIKLEPGLDEAYSALGAAYFDKK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
EFNAALPWMQKRVDIAPDDSLRQFDLGNVYFQLNRYNDAVASYQKAIDNSYSFQEAWYSM
HHHHHHHHHHHHCCCCCCCCCHHCCCCCEEEEEECHHHHHHHHHHHHCCCCHHHHHHHHH
AVCYIKMGKIDEARKIHKWLQTKNNYLAVSLERHLQNDVPDKAGK
HHHHHHCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA