Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21674572

Identifier: 21674572

GI number: 21674572

Start: 1666864

End: 1667985

Strand: Reverse

Name: 21674572

Synonym: CT1758

Alternate gene names: NA

Gene position: 1667985-1666864 (Counterclockwise)

Preceding gene: 21674573

Following gene: 21674571

Centisome position: 77.4

GC content: 61.94

Gene sequence:

>1122_bases
ATGAGAGCCGCATCGACTCGCACCCTCCTCTGGCTTCTGCCGTTCTTCCTGCTGTTGCTGGCAGCCTGCCAGCCGTCCGG
CGGCAAGAAGCCCGATGCGGCGACGCGCGAGGTGGTCGATATGGCCGGGCGGCGCATGACGGTTCCCGTCACCATCGATC
GGGCCTACGCAACGCGACCCGGCAGCGTGACGCTCTACGCCGTCGCGCCCGACCTGATGGTGAACCGCTCGCTCTGGATG
ACCGACGGCGCGGAACGCTTCATGAGTCCCGCGTATCTCAAACTGCCGTTCTCGGATGGTTCAGCCGAGGAGATCGTCAA
GCTTCATCCCGACGTCATCATCTCCTACTTTGCGATCAATCCGCAAAGCATCGACCAGGCCGACCGGCTCAGTCAGCGAA
CCGGCATTCCGGTCTTCATGGTCGATATGGAGATGAAGCGCTACCCCGAAGCGTTCGCGGCGATGGGCGAGCTGCTCGGC
AGGCAGGAGCAGGCGGCGAAGATGACGGCATACATCGAAAAGTGGCTGCTGCCGGTGTTCGCCAAAGCTGCCCAGATTCC
CGTCAGCCAGCGGAAGCGAGTCTATTACGCCGAAGGCAATCGTGGCCTGAACACCGATCCATCGGGATCGTTCCACAGTC
AGATCATCGATCTGGTCGGCGCGACCAACGTCGCCCAGGTCAACCGGCTCTCCGGCAAGGGGATGAGCGCCGTGTCGATG
GAGCAGGTCTTGCAATGGAATCCCGACGAGGTGATCGTCTGGACGGGCATGGGGCCGTCGATGACCACCTATCGCGCCAT
CGCCGCCGATCCGCTCTGGCAGCGGGTTCCCGCCGTCCGCAAGGGGCGCATCCACCAGATTCCGTTTCTCCCCTTCGGCT
GGTTTGACCGCCCGCCGGGCACGAACCGGATTCTCGGAGCGCTCTGGCTCGCCCAATTGGTTTATCCCGAGGTCTATCAC
ATCGATCTCGAAACTGCTACCAGAGAGTACTTCACCATTTTCTTTCACCGCGACCTGACCGACGCCGAGCTGCGCGAGGT
GTTGCACCCTTTCGCCTTCACGGATGTCGCGCCGGTACAGAGCGCAAAATCAAAACCGGGACATGATGAAACCAGTCGAT
AA

Upstream 100 bases:

>100_bases
ACTTCAGAGCGATACTCGAACGGCTCGGCATCGATGGCGTCGTGGAGCATCAGGAGGCCGGAACCTGGATCATTTTCCGC
AAACCTGCGGAGGTGGAAGC

Downstream 100 bases:

>100_bases
GATGGACAAGGACGGCAACGTCCTCGCGGTGTGCAGCCAGCCGCCGCTGCACCGCCGAACCACGGGCAACGGCGTGCCGC
TCATCAAAAAGGGGGCGATC

Product: iron(III) ABC transporter, periplasmic iron-binding protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MRAASTRTLLWLLPFFLLLLAACQPSGGKKPDAATREVVDMAGRRMTVPVTIDRAYATRPGSVTLYAVAPDLMVNRSLWM
TDGAERFMSPAYLKLPFSDGSAEEIVKLHPDVIISYFAINPQSIDQADRLSQRTGIPVFMVDMEMKRYPEAFAAMGELLG
RQEQAAKMTAYIEKWLLPVFAKAAQIPVSQRKRVYYAEGNRGLNTDPSGSFHSQIIDLVGATNVAQVNRLSGKGMSAVSM
EQVLQWNPDEVIVWTGMGPSMTTYRAIAADPLWQRVPAVRKGRIHQIPFLPFGWFDRPPGTNRILGALWLAQLVYPEVYH
IDLETATREYFTIFFHRDLTDAELREVLHPFAFTDVAPVQSAKSKPGHDETSR

Sequences:

>Translated_373_residues
MRAASTRTLLWLLPFFLLLLAACQPSGGKKPDAATREVVDMAGRRMTVPVTIDRAYATRPGSVTLYAVAPDLMVNRSLWM
TDGAERFMSPAYLKLPFSDGSAEEIVKLHPDVIISYFAINPQSIDQADRLSQRTGIPVFMVDMEMKRYPEAFAAMGELLG
RQEQAAKMTAYIEKWLLPVFAKAAQIPVSQRKRVYYAEGNRGLNTDPSGSFHSQIIDLVGATNVAQVNRLSGKGMSAVSM
EQVLQWNPDEVIVWTGMGPSMTTYRAIAADPLWQRVPAVRKGRIHQIPFLPFGWFDRPPGTNRILGALWLAQLVYPEVYH
IDLETATREYFTIFFHRDLTDAELREVLHPFAFTDVAPVQSAKSKPGHDETSR
>Mature_373_residues
MRAASTRTLLWLLPFFLLLLAACQPSGGKKPDAATREVVDMAGRRMTVPVTIDRAYATRPGSVTLYAVAPDLMVNRSLWM
TDGAERFMSPAYLKLPFSDGSAEEIVKLHPDVIISYFAINPQSIDQADRLSQRTGIPVFMVDMEMKRYPEAFAAMGELLG
RQEQAAKMTAYIEKWLLPVFAKAAQIPVSQRKRVYYAEGNRGLNTDPSGSFHSQIIDLVGATNVAQVNRLSGKGMSAVSM
EQVLQWNPDEVIVWTGMGPSMTTYRAIAADPLWQRVPAVRKGRIHQIPFLPFGWFDRPPGTNRILGALWLAQLVYPEVYH
IDLETATREYFTIFFHRDLTDAELREVLHPFAFTDVAPVQSAKSKPGHDETSR

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 41792; Mature: 41792

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAASTRTLLWLLPFFLLLLAACQPSGGKKPDAATREVVDMAGRRMTVPVTIDRAYATRP
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEEHHHCCCC
GSVTLYAVAPDLMVNRSLWMTDGAERFMSPAYLKLPFSDGSAEEIVKLHPDVIISYFAIN
CCEEEEEECCHHHHCCCEEECCCHHHHCCCCEEEEECCCCCHHHHHHHCCCCEEEEEECC
PQSIDQADRLSQRTGIPVFMVDMEMKRYPEAFAAMGELLGRQEQAAKMTAYIEKWLLPVF
CHHCCHHHHHHHHCCCCEEEEECHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
AKAAQIPVSQRKRVYYAEGNRGLNTDPSGSFHSQIIDLVGATNVAQVNRLSGKGMSAVSM
HHHHCCCHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHH
EQVLQWNPDEVIVWTGMGPSMTTYRAIAADPLWQRVPAVRKGRIHQIPFLPFGWFDRPPG
HHHHCCCCCCEEEEECCCCCHHHHHHHHCCHHHHHCCHHHCCCEEECCCCCCCCCCCCCC
TNRILGALWLAQLVYPEVYHIDLETATREYFTIFFHRDLTDAELREVLHPFAFTDVAPVQ
CHHHHHHHHHHHHHCCEEEEEEHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHCCCHHHH
SAKSKPGHDETSR
HHCCCCCCCCCCC
>Mature Secondary Structure
MRAASTRTLLWLLPFFLLLLAACQPSGGKKPDAATREVVDMAGRRMTVPVTIDRAYATRP
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEEHHHCCCC
GSVTLYAVAPDLMVNRSLWMTDGAERFMSPAYLKLPFSDGSAEEIVKLHPDVIISYFAIN
CCEEEEEECCHHHHCCCEEECCCHHHHCCCCEEEEECCCCCHHHHHHHCCCCEEEEEECC
PQSIDQADRLSQRTGIPVFMVDMEMKRYPEAFAAMGELLGRQEQAAKMTAYIEKWLLPVF
CHHCCHHHHHHHHCCCCEEEEECHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
AKAAQIPVSQRKRVYYAEGNRGLNTDPSGSFHSQIIDLVGATNVAQVNRLSGKGMSAVSM
HHHHCCCHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHH
EQVLQWNPDEVIVWTGMGPSMTTYRAIAADPLWQRVPAVRKGRIHQIPFLPFGWFDRPPG
HHHHCCCCCCEEEEECCCCCHHHHHHHHCCHHHHHCCHHHCCCEEECCCCCCCCCCCCCC
TNRILGALWLAQLVYPEVYHIDLETATREYFTIFFHRDLTDAELREVLHPFAFTDVAPVQ
CHHHHHHHHHHHHHCCEEEEEEHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHCCCHHHH
SAKSKPGHDETSR
HHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]