| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674572
Identifier: 21674572
GI number: 21674572
Start: 1666864
End: 1667985
Strand: Reverse
Name: 21674572
Synonym: CT1758
Alternate gene names: NA
Gene position: 1667985-1666864 (Counterclockwise)
Preceding gene: 21674573
Following gene: 21674571
Centisome position: 77.4
GC content: 61.94
Gene sequence:
>1122_bases ATGAGAGCCGCATCGACTCGCACCCTCCTCTGGCTTCTGCCGTTCTTCCTGCTGTTGCTGGCAGCCTGCCAGCCGTCCGG CGGCAAGAAGCCCGATGCGGCGACGCGCGAGGTGGTCGATATGGCCGGGCGGCGCATGACGGTTCCCGTCACCATCGATC GGGCCTACGCAACGCGACCCGGCAGCGTGACGCTCTACGCCGTCGCGCCCGACCTGATGGTGAACCGCTCGCTCTGGATG ACCGACGGCGCGGAACGCTTCATGAGTCCCGCGTATCTCAAACTGCCGTTCTCGGATGGTTCAGCCGAGGAGATCGTCAA GCTTCATCCCGACGTCATCATCTCCTACTTTGCGATCAATCCGCAAAGCATCGACCAGGCCGACCGGCTCAGTCAGCGAA CCGGCATTCCGGTCTTCATGGTCGATATGGAGATGAAGCGCTACCCCGAAGCGTTCGCGGCGATGGGCGAGCTGCTCGGC AGGCAGGAGCAGGCGGCGAAGATGACGGCATACATCGAAAAGTGGCTGCTGCCGGTGTTCGCCAAAGCTGCCCAGATTCC CGTCAGCCAGCGGAAGCGAGTCTATTACGCCGAAGGCAATCGTGGCCTGAACACCGATCCATCGGGATCGTTCCACAGTC AGATCATCGATCTGGTCGGCGCGACCAACGTCGCCCAGGTCAACCGGCTCTCCGGCAAGGGGATGAGCGCCGTGTCGATG GAGCAGGTCTTGCAATGGAATCCCGACGAGGTGATCGTCTGGACGGGCATGGGGCCGTCGATGACCACCTATCGCGCCAT CGCCGCCGATCCGCTCTGGCAGCGGGTTCCCGCCGTCCGCAAGGGGCGCATCCACCAGATTCCGTTTCTCCCCTTCGGCT GGTTTGACCGCCCGCCGGGCACGAACCGGATTCTCGGAGCGCTCTGGCTCGCCCAATTGGTTTATCCCGAGGTCTATCAC ATCGATCTCGAAACTGCTACCAGAGAGTACTTCACCATTTTCTTTCACCGCGACCTGACCGACGCCGAGCTGCGCGAGGT GTTGCACCCTTTCGCCTTCACGGATGTCGCGCCGGTACAGAGCGCAAAATCAAAACCGGGACATGATGAAACCAGTCGAT AA
Upstream 100 bases:
>100_bases ACTTCAGAGCGATACTCGAACGGCTCGGCATCGATGGCGTCGTGGAGCATCAGGAGGCCGGAACCTGGATCATTTTCCGC AAACCTGCGGAGGTGGAAGC
Downstream 100 bases:
>100_bases GATGGACAAGGACGGCAACGTCCTCGCGGTGTGCAGCCAGCCGCCGCTGCACCGCCGAACCACGGGCAACGGCGTGCCGC TCATCAAAAAGGGGGCGATC
Product: iron(III) ABC transporter, periplasmic iron-binding protein, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MRAASTRTLLWLLPFFLLLLAACQPSGGKKPDAATREVVDMAGRRMTVPVTIDRAYATRPGSVTLYAVAPDLMVNRSLWM TDGAERFMSPAYLKLPFSDGSAEEIVKLHPDVIISYFAINPQSIDQADRLSQRTGIPVFMVDMEMKRYPEAFAAMGELLG RQEQAAKMTAYIEKWLLPVFAKAAQIPVSQRKRVYYAEGNRGLNTDPSGSFHSQIIDLVGATNVAQVNRLSGKGMSAVSM EQVLQWNPDEVIVWTGMGPSMTTYRAIAADPLWQRVPAVRKGRIHQIPFLPFGWFDRPPGTNRILGALWLAQLVYPEVYH IDLETATREYFTIFFHRDLTDAELREVLHPFAFTDVAPVQSAKSKPGHDETSR
Sequences:
>Translated_373_residues MRAASTRTLLWLLPFFLLLLAACQPSGGKKPDAATREVVDMAGRRMTVPVTIDRAYATRPGSVTLYAVAPDLMVNRSLWM TDGAERFMSPAYLKLPFSDGSAEEIVKLHPDVIISYFAINPQSIDQADRLSQRTGIPVFMVDMEMKRYPEAFAAMGELLG RQEQAAKMTAYIEKWLLPVFAKAAQIPVSQRKRVYYAEGNRGLNTDPSGSFHSQIIDLVGATNVAQVNRLSGKGMSAVSM EQVLQWNPDEVIVWTGMGPSMTTYRAIAADPLWQRVPAVRKGRIHQIPFLPFGWFDRPPGTNRILGALWLAQLVYPEVYH IDLETATREYFTIFFHRDLTDAELREVLHPFAFTDVAPVQSAKSKPGHDETSR >Mature_373_residues MRAASTRTLLWLLPFFLLLLAACQPSGGKKPDAATREVVDMAGRRMTVPVTIDRAYATRPGSVTLYAVAPDLMVNRSLWM TDGAERFMSPAYLKLPFSDGSAEEIVKLHPDVIISYFAINPQSIDQADRLSQRTGIPVFMVDMEMKRYPEAFAAMGELLG RQEQAAKMTAYIEKWLLPVFAKAAQIPVSQRKRVYYAEGNRGLNTDPSGSFHSQIIDLVGATNVAQVNRLSGKGMSAVSM EQVLQWNPDEVIVWTGMGPSMTTYRAIAADPLWQRVPAVRKGRIHQIPFLPFGWFDRPPGTNRILGALWLAQLVYPEVYH IDLETATREYFTIFFHRDLTDAELREVLHPFAFTDVAPVQSAKSKPGHDETSR
Specific function: Unknown
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002491 [H]
Pfam domain/function: PF01497 Peripla_BP_2 [H]
EC number: NA
Molecular weight: Translated: 41792; Mature: 41792
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAASTRTLLWLLPFFLLLLAACQPSGGKKPDAATREVVDMAGRRMTVPVTIDRAYATRP CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEEHHHCCCC GSVTLYAVAPDLMVNRSLWMTDGAERFMSPAYLKLPFSDGSAEEIVKLHPDVIISYFAIN CCEEEEEECCHHHHCCCEEECCCHHHHCCCCEEEEECCCCCHHHHHHHCCCCEEEEEECC PQSIDQADRLSQRTGIPVFMVDMEMKRYPEAFAAMGELLGRQEQAAKMTAYIEKWLLPVF CHHCCHHHHHHHHCCCCEEEEECHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AKAAQIPVSQRKRVYYAEGNRGLNTDPSGSFHSQIIDLVGATNVAQVNRLSGKGMSAVSM HHHHCCCHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHH EQVLQWNPDEVIVWTGMGPSMTTYRAIAADPLWQRVPAVRKGRIHQIPFLPFGWFDRPPG HHHHCCCCCCEEEEECCCCCHHHHHHHHCCHHHHHCCHHHCCCEEECCCCCCCCCCCCCC TNRILGALWLAQLVYPEVYHIDLETATREYFTIFFHRDLTDAELREVLHPFAFTDVAPVQ CHHHHHHHHHHHHHCCEEEEEEHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHCCCHHHH SAKSKPGHDETSR HHCCCCCCCCCCC >Mature Secondary Structure MRAASTRTLLWLLPFFLLLLAACQPSGGKKPDAATREVVDMAGRRMTVPVTIDRAYATRP CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEEHHHCCCC GSVTLYAVAPDLMVNRSLWMTDGAERFMSPAYLKLPFSDGSAEEIVKLHPDVIISYFAIN CCEEEEEECCHHHHCCCEEECCCHHHHCCCCEEEEECCCCCHHHHHHHCCCCEEEEEECC PQSIDQADRLSQRTGIPVFMVDMEMKRYPEAFAAMGELLGRQEQAAKMTAYIEKWLLPVF CHHCCHHHHHHHHCCCCEEEEECHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AKAAQIPVSQRKRVYYAEGNRGLNTDPSGSFHSQIIDLVGATNVAQVNRLSGKGMSAVSM HHHHCCCHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHH EQVLQWNPDEVIVWTGMGPSMTTYRAIAADPLWQRVPAVRKGRIHQIPFLPFGWFDRPPG HHHHCCCCCCEEEEECCCCCHHHHHHHHCCHHHHHCCHHHCCCEEECCCCCCCCCCCCCC TNRILGALWLAQLVYPEVYHIDLETATREYFTIFFHRDLTDAELREVLHPFAFTDVAPVQ CHHHHHHHHHHHHHCCEEEEEEHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHCCCHHHH SAKSKPGHDETSR HHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]