| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674403
Identifier: 21674403
GI number: 21674403
Start: 1492533
End: 1493066
Strand: Reverse
Name: 21674403
Synonym: CT1585
Alternate gene names: NA
Gene position: 1493066-1492533 (Counterclockwise)
Preceding gene: 21674404
Following gene: 21674402
Centisome position: 69.29
GC content: 55.99
Gene sequence:
>534_bases ATGTCCAAAATCAAGGCAAAAAGGGTAGGGTTCCGGCTTGACATGACGCCGATGGTCGATGTGGCATTTCTGCTGCTGAC CTTTTTTATGCTGACCACCAAGTTCCGTCCGCCGGAAGCGGTGACCATCGACCTGCCGTCGTCTCATTCGAACATGAAGC TGCCGGAGTCCGACGTGCTGACCGTGACCATCGCGAAGGACAACTCAATCTACATGGGCGTTTCGTCGCAGCGCACCAGG GAGCGGCTGTTCGATATGGTCGTGAGGCCGAAGCTCGAAAATGCGGGCGTCTCCAAGGCTGCGGTGGCCGATTCGCTCAG CAGATTCAGGCTCGACGACAGCTTTAAAATCGAAAAAGAGGAGCTGGCCCGCTACATCATGATGTCGCGCTTTGCCGATC AGCGGCTCAGGCCGGTGATCCGGGCGGACAACAAGGCCGATTACGAGGCGGTCAACTATGTCATCAAGGTGTTCAGGAAG ATGAACCTGCTCAACTTCAACCTGGTGACCGTTCTCGAAAAGGAGGTGCGTTGA
Upstream 100 bases:
>100_bases CGTCTTTACCAGCCGGGTTGACCGCTTCAGCTACCAGATCGACGAGGCGGCGTTCTACATTATCCAGACCCTTGGCAGCA GTAAATCCTGATCTCGAACC
Downstream 100 bases:
>100_bases TATGGGCATGGTTGATTCACCCGGAGACCGGCGCAGCTCGAAACGGGGCGGGCACCAGCGCAAACGGCTCGGCTTCAAGC TCGACATGACGCCGATGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MSKIKAKRVGFRLDMTPMVDVAFLLLTFFMLTTKFRPPEAVTIDLPSSHSNMKLPESDVLTVTIAKDNSIYMGVSSQRTR ERLFDMVVRPKLENAGVSKAAVADSLSRFRLDDSFKIEKEELARYIMMSRFADQRLRPVIRADNKADYEAVNYVIKVFRK MNLLNFNLVTVLEKEVR
Sequences:
>Translated_177_residues MSKIKAKRVGFRLDMTPMVDVAFLLLTFFMLTTKFRPPEAVTIDLPSSHSNMKLPESDVLTVTIAKDNSIYMGVSSQRTR ERLFDMVVRPKLENAGVSKAAVADSLSRFRLDDSFKIEKEELARYIMMSRFADQRLRPVIRADNKADYEAVNYVIKVFRK MNLLNFNLVTVLEKEVR >Mature_176_residues SKIKAKRVGFRLDMTPMVDVAFLLLTFFMLTTKFRPPEAVTIDLPSSHSNMKLPESDVLTVTIAKDNSIYMGVSSQRTRE RLFDMVVRPKLENAGVSKAAVADSLSRFRLDDSFKIEKEELARYIMMSRFADQRLRPVIRADNKADYEAVNYVIKVFRKM NLLNFNLVTVLEKEVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20417; Mature: 20286
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIKAKRVGFRLDMTPMVDVAFLLLTFFMLTTKFRPPEAVTIDLPSSHSNMKLPESDVL CCCCCHHHCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCEE TVTIAKDNSIYMGVSSQRTRERLFDMVVRPKLENAGVSKAAVADSLSRFRLDDSFKIEKE EEEEECCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHH ELARYIMMSRFADQRLRPVIRADNKADYEAVNYVIKVFRKMNLLNFNLVTVLEKEVR HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC >Mature Secondary Structure SKIKAKRVGFRLDMTPMVDVAFLLLTFFMLTTKFRPPEAVTIDLPSSHSNMKLPESDVL CCCCHHHCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCEE TVTIAKDNSIYMGVSSQRTRERLFDMVVRPKLENAGVSKAAVADSLSRFRLDDSFKIEKE EEEEECCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHH ELARYIMMSRFADQRLRPVIRADNKADYEAVNYVIKVFRKMNLLNFNLVTVLEKEVR HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA