| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is tolQ [H]
Identifier: 21674404
GI number: 21674404
Start: 1493076
End: 1493819
Strand: Reverse
Name: tolQ [H]
Synonym: CT1586
Alternate gene names: 21674404
Gene position: 1493819-1493076 (Counterclockwise)
Preceding gene: 21674407
Following gene: 21674403
Centisome position: 69.32
GC content: 59.81
Gene sequence:
>744_bases ATGAAGCAGGGATTTTTTACGGCGATACTGATTGTGGTGACCTACGCGGTATCCCTTGGTTTTTATGTCTGGATGGGCAC AACACCACCGGAGTCCATGTTCCATGCCGTCTGGAAAGGCGGGCCGATCGTGTCGGTGCTGATGGCGCTGATTCTGATGG TGATCGCCTACATCGTCGAGCGGATCGTCGCGCTAAACAAAGCTTCCGGCAAAGGCTCCATCACGGAGTTCGTACAAAGC CTCAAGCAGGATGTCGATTCGGGCTCCATCGACCAGGCCATCTCCCGCTGTGACGACCACCAGAGCTCCCTCTCCGCCGT GCTCCGCGCCGTGCTCGACCGCTACAAGATGCTCGCCGTACACAACGTGACCGACCGTGAGAAGCGCATCAGCGAGATGC AGAAAGCTGTCGAGGAGGCGACCCTCATGGAGATGCCGCTGCTCGAAAAGAACCTCGTCGCCATCTCGACCATCGCCTCG ATCTCCACGATGGTCGGCCTGCTCGGTACCACGCTCGGCATGATCCGCGCCTTCTCGGCGATGGCCACCAGCGGCGCGCC CGACGCGGTGCAGCTCTCGCTCGGCATCTCCGAGGCGCTCTTCAACACGGCGCTCGGCATTCTCGGCGGTATCATGGGCA TCGTCACCTACAACGTCTTTACCAGCCGGGTTGACCGCTTCAGCTACCAGATCGACGAGGCGGCGTTCTACATTATCCAG ACCCTTGGCAGCAGTAAATCCTGA
Upstream 100 bases:
>100_bases GTCTCAACTCCTGGACGTATGACTGCCGGATGAGCTTGATCTGGTTTCGGAGAGGCTTTTTTATGGATTCCGTTACTTCC AACATCTCAATACCAACCAT
Downstream 100 bases:
>100_bases TCTCGAACCATGTCCAAAATCAAGGCAAAAAGGGTAGGGTTCCGGCTTGACATGACGCCGATGGTCGATGTGGCATTTCT GCTGCTGACCTTTTTTATGC
Product: MotA/TolQ/ExbB proton channel family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MKQGFFTAILIVVTYAVSLGFYVWMGTTPPESMFHAVWKGGPIVSVLMALILMVIAYIVERIVALNKASGKGSITEFVQS LKQDVDSGSIDQAISRCDDHQSSLSAVLRAVLDRYKMLAVHNVTDREKRISEMQKAVEEATLMEMPLLEKNLVAISTIAS ISTMVGLLGTTLGMIRAFSAMATSGAPDAVQLSLGISEALFNTALGILGGIMGIVTYNVFTSRVDRFSYQIDEAAFYIIQ TLGSSKS
Sequences:
>Translated_247_residues MKQGFFTAILIVVTYAVSLGFYVWMGTTPPESMFHAVWKGGPIVSVLMALILMVIAYIVERIVALNKASGKGSITEFVQS LKQDVDSGSIDQAISRCDDHQSSLSAVLRAVLDRYKMLAVHNVTDREKRISEMQKAVEEATLMEMPLLEKNLVAISTIAS ISTMVGLLGTTLGMIRAFSAMATSGAPDAVQLSLGISEALFNTALGILGGIMGIVTYNVFTSRVDRFSYQIDEAAFYIIQ TLGSSKS >Mature_247_residues MKQGFFTAILIVVTYAVSLGFYVWMGTTPPESMFHAVWKGGPIVSVLMALILMVIAYIVERIVALNKASGKGSITEFVQS LKQDVDSGSIDQAISRCDDHQSSLSAVLRAVLDRYKMLAVHNVTDREKRISEMQKAVEEATLMEMPLLEKNLVAISTIAS ISTMVGLLGTTLGMIRAFSAMATSGAPDAVQLSLGISEALFNTALGILGGIMGIVTYNVFTSRVDRFSYQIDEAAFYIIQ TLGSSKS
Specific function: Involved in the tonB-independent uptake of proteins [H]
COG id: COG0811
COG function: function code U; Biopolymer transport proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exbB/tolQ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002898 - InterPro: IPR014163 [H]
Pfam domain/function: PF01618 MotA_ExbB [H]
EC number: NA
Molecular weight: Translated: 26706; Mature: 26706
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQGFFTAILIVVTYAVSLGFYVWMGTTPPESMFHAVWKGGPIVSVLMALILMVIAYIVE CCCHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RIVALNKASGKGSITEFVQSLKQDVDSGSIDQAISRCDDHQSSLSAVLRAVLDRYKMLAV HHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HNVTDREKRISEMQKAVEEATLMEMPLLEKNLVAISTIASISTMVGLLGTTLGMIRAFSA HCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MATSGAPDAVQLSLGISEALFNTALGILGGIMGIVTYNVFTSRVDRFSYQIDEAAFYIIQ HHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLGSSKS HHCCCCC >Mature Secondary Structure MKQGFFTAILIVVTYAVSLGFYVWMGTTPPESMFHAVWKGGPIVSVLMALILMVIAYIVE CCCHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RIVALNKASGKGSITEFVQSLKQDVDSGSIDQAISRCDDHQSSLSAVLRAVLDRYKMLAV HHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HNVTDREKRISEMQKAVEEATLMEMPLLEKNLVAISTIASISTMVGLLGTTLGMIRAFSA HCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MATSGAPDAVQLSLGISEALFNTALGILGGIMGIVTYNVFTSRVDRFSYQIDEAAFYIIQ HHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLGSSKS HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8955385; 10984043 [H]