| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674339
Identifier: 21674339
GI number: 21674339
Start: 1422241
End: 1422828
Strand: Direct
Name: 21674339
Synonym: CT1519
Alternate gene names: NA
Gene position: 1422241-1422828 (Clockwise)
Preceding gene: 21674334
Following gene: 21674340
Centisome position: 66.0
GC content: 55.78
Gene sequence:
>588_bases ATGAGAACACGTTTCTGGATTTTTTCGATGATCGCCCTGCTGACGCTTGCGGGGTGTTCTAACTACCGGGTCGTCAGCGA CTACGACCGCACCATTCCCTTCGAGCGCTACAAAACCTACCGATGGAGCGATAAAGGCAGCGCTGGAATCAGCGACGACA TTCTTGCCAACAATCCGCTGATCTACAAAAACATTAAATCAGTGGTTGATCGTGAACTGGCCACCAAAGGCTTCGTGCTG AAAGCATCCGGCCCAGTCGATTTCACGGTCTTTCCTCACGCACGAGTCCGCGAGCGGGTGGTTATCGAGCCGAGCGGCTT CTTCGGTTACGGCTGCGGCTACTGCCCCGGCTGGGGATGGCGCAGCTACCCGCCCTACTGGTACGATCCCTACCCGTACC CGGTGTTCAGCCACTATGAAGAGGGCACGCTCATCATCGACATTATCGATTCCAGAAGCGGCGAAGTGGCTTGGGCCGGC ATCGCGCGAGGCATCCTGAAAGACTACGATTCATCCGTGCAGATGAACCGCGACCTCGACGAAGTGCTCACAAAAATCAT GGCCCAGTTTCCGCCGATGGTGAAATAA
Upstream 100 bases:
>100_bases GAGCCAAAAGTGCGTTGAAGGTTTTTTTCGGATGTTGACGTCAAAAAAACTGCGACGAGACAACACTATTCAGCTAAACG ATGAACAGGCGAGGTAAACC
Downstream 100 bases:
>100_bases GGAGCAACGGCCTCGATTTTGCAGGGGCAGGTTTCGCGCCTGCCCTGTCCTCCGTTCTGCGACTTGCACCATGATGGTTC ATTGGATATTTTTTCATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MRTRFWIFSMIALLTLAGCSNYRVVSDYDRTIPFERYKTYRWSDKGSAGISDDILANNPLIYKNIKSVVDRELATKGFVL KASGPVDFTVFPHARVRERVVIEPSGFFGYGCGYCPGWGWRSYPPYWYDPYPYPVFSHYEEGTLIIDIIDSRSGEVAWAG IARGILKDYDSSVQMNRDLDEVLTKIMAQFPPMVK
Sequences:
>Translated_195_residues MRTRFWIFSMIALLTLAGCSNYRVVSDYDRTIPFERYKTYRWSDKGSAGISDDILANNPLIYKNIKSVVDRELATKGFVL KASGPVDFTVFPHARVRERVVIEPSGFFGYGCGYCPGWGWRSYPPYWYDPYPYPVFSHYEEGTLIIDIIDSRSGEVAWAG IARGILKDYDSSVQMNRDLDEVLTKIMAQFPPMVK >Mature_195_residues MRTRFWIFSMIALLTLAGCSNYRVVSDYDRTIPFERYKTYRWSDKGSAGISDDILANNPLIYKNIKSVVDRELATKGFVL KASGPVDFTVFPHARVRERVVIEPSGFFGYGCGYCPGWGWRSYPPYWYDPYPYPVFSHYEEGTLIIDIIDSRSGEVAWAG IARGILKDYDSSVQMNRDLDEVLTKIMAQFPPMVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22387; Mature: 22387
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTRFWIFSMIALLTLAGCSNYRVVSDYDRTIPFERYKTYRWSDKGSAGISDDILANNPL CCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHEEECCCCCCCCCCCCHHCCCCC IYKNIKSVVDRELATKGFVLKASGPVDFTVFPHARVRERVVIEPSGFFGYGCGYCPGWGW HHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCHHCCCEEEECCCCCCCCCCCCCCCCCC RSYPPYWYDPYPYPVFSHYEEGTLIIDIIDSRSGEVAWAGIARGILKDYDSSVQMNRDLD CCCCCCCCCCCCCCHHCCCCCCEEEEEEECCCCCCEEHHHHHHHHHHHCCCCEECCCCHH EVLTKIMAQFPPMVK HHHHHHHHHCCCCCC >Mature Secondary Structure MRTRFWIFSMIALLTLAGCSNYRVVSDYDRTIPFERYKTYRWSDKGSAGISDDILANNPL CCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHEEECCCCCCCCCCCCHHCCCCC IYKNIKSVVDRELATKGFVLKASGPVDFTVFPHARVRERVVIEPSGFFGYGCGYCPGWGW HHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCHHCCCEEEECCCCCCCCCCCCCCCCCC RSYPPYWYDPYPYPVFSHYEEGTLIIDIIDSRSGEVAWAGIARGILKDYDSSVQMNRDLD CCCCCCCCCCCCCCHHCCCCCCEEEEEEECCCCCCEEHHHHHHHHHHHCCCCEECCCCHH EVLTKIMAQFPPMVK HHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA