| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674330
Identifier: 21674330
GI number: 21674330
Start: 1416960
End: 1417835
Strand: Reverse
Name: 21674330
Synonym: CT1510
Alternate gene names: NA
Gene position: 1417835-1416960 (Counterclockwise)
Preceding gene: 21674331
Following gene: 21674329
Centisome position: 65.79
GC content: 61.3
Gene sequence:
>876_bases ATGAATACCGATCAGGTTCGCATAGCGCTCGTCCAGATGAGCTGCGTTGAGAATCCGCAGGAAAACCTCAGGAAAGCGCA GGAGCGCATCCGCCAGGCTGCCGCGGGCGGGGCCAATATCGTCTGCCTTCAGGAGCTGTTCACCACGCTCTACTTCTGCC AGACCGAGGAGTACGAGCCGTTTGGATACGCCGAGCCGATTCCCGGCCCGTCGACCGCTGCATTGCAGGAGCTGGCCGCC GAACTTGGGGTGGTGATCGTGGCTTCGCTCTTTGAGATTCGCGCCAAGGGGGTGCACCACAACACGGCGGCGGTGATCGA TGCTGACGGCAGCTACCTCGGCAAGTACCGCAAGATGCACATTCCCGACGATCCGGGCTTCTACGAGAAGTTCTACTTTG TGCCCGGCGACCTCGGTTACAAGGTGTTTGATACGAAATTTGGTACGATCGGCGTCCTGATTTGCTGGGATCAGTGGTAC CCCGAAGCCGCGCGACTTACGGCGCTGCGCGGAGCTGATATTCTCTTCTATCCCACGGCCATCGGCTGGGCCACCTCCGA GACCTCGCAGGAGGTTCGCGCGAGCCAGCGGCAGGCGTGGAAAACCTCGCATCTCGGTCACGCCGTGGCAAACGGTGTGT TTGTCGCCGCCGCCAATCGTGCGGGCACGGAGGGCGAACTCGAGTTCTGGGGCAACAGCTTCGTCTCCGATCCCTTCGGT CAGGTGATTGCCGAGGCGGCCCACAACAGCGAGGAGATTCTCTACGCCGACTGCGACCTCTCGAAGATCGGCTTTTACCG CTCGCACTGGCCCTTCATGCGCGACCGCAGGATCGACTCCTATGGCGACATCACGCGGCGCTGGATCGACGAATAA
Upstream 100 bases:
>100_bases TGAATGCGGTGCTGGCTGGCACCGGCAAGGTGCTTACCGTGCACGGCTTACTCTTTTCGCTCGGGCTTGTCATTCCCAAT ATCATTTCGATTTTTCGTCC
Downstream 100 bases:
>100_bases ACCGTTATGATGATGAACCTGTTCGGCCAAATCATTCTTTTTACGCTTATCGGCACCTGGCTCATCAAACTTGCCGCCGA TCTTTTGAACCTTCGTGCTG
Product: carbon-nitrogen hydrolase family protein
Products: NA
Alternate protein names: D-N-alpha-carbamilase [H]
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MNTDQVRIALVQMSCVENPQENLRKAQERIRQAAAGGANIVCLQELFTTLYFCQTEEYEPFGYAEPIPGPSTAALQELAA ELGVVIVASLFEIRAKGVHHNTAAVIDADGSYLGKYRKMHIPDDPGFYEKFYFVPGDLGYKVFDTKFGTIGVLICWDQWY PEAARLTALRGADILFYPTAIGWATSETSQEVRASQRQAWKTSHLGHAVANGVFVAAANRAGTEGELEFWGNSFVSDPFG QVIAEAAHNSEEILYADCDLSKIGFYRSHWPFMRDRRIDSYGDITRRWIDE
Sequences:
>Translated_291_residues MNTDQVRIALVQMSCVENPQENLRKAQERIRQAAAGGANIVCLQELFTTLYFCQTEEYEPFGYAEPIPGPSTAALQELAA ELGVVIVASLFEIRAKGVHHNTAAVIDADGSYLGKYRKMHIPDDPGFYEKFYFVPGDLGYKVFDTKFGTIGVLICWDQWY PEAARLTALRGADILFYPTAIGWATSETSQEVRASQRQAWKTSHLGHAVANGVFVAAANRAGTEGELEFWGNSFVSDPFG QVIAEAAHNSEEILYADCDLSKIGFYRSHWPFMRDRRIDSYGDITRRWIDE >Mature_291_residues MNTDQVRIALVQMSCVENPQENLRKAQERIRQAAAGGANIVCLQELFTTLYFCQTEEYEPFGYAEPIPGPSTAALQELAA ELGVVIVASLFEIRAKGVHHNTAAVIDADGSYLGKYRKMHIPDDPGFYEKFYFVPGDLGYKVFDTKFGTIGVLICWDQWY PEAARLTALRGADILFYPTAIGWATSETSQEVRASQRQAWKTSHLGHAVANGVFVAAANRAGTEGELEFWGNSFVSDPFG QVIAEAAHNSEEILYADCDLSKIGFYRSHWPFMRDRRIDSYGDITRRWIDE
Specific function: The enzyme catalyzes the hydrolysis of N-carbamoyl-D- amino acids to the corresponding which are useful intermediates in the preparation of beta-lactam antibiotics. Industrial production of beta-lactam antibiotics is now being developed using this enzyme
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Homo sapiens, GI9910460, Length=282, Percent_Identity=35.8156028368794, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI7706509, Length=279, Percent_Identity=31.8996415770609, Blast_Score=121, Evalue=9e-28, Organism=Homo sapiens, GI297632350, Length=288, Percent_Identity=28.4722222222222, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI297632348, Length=288, Percent_Identity=28.4722222222222, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI5031947, Length=288, Percent_Identity=28.4722222222222, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI297632346, Length=188, Percent_Identity=28.1914893617021, Blast_Score=72, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17533173, Length=304, Percent_Identity=31.9078947368421, Blast_Score=131, Evalue=4e-31, Organism=Caenorhabditis elegans, GI17556280, Length=297, Percent_Identity=26.2626262626263, Blast_Score=89, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6323383, Length=298, Percent_Identity=30.8724832214765, Blast_Score=122, Evalue=6e-29, Organism=Saccharomyces cerevisiae, GI6322335, Length=313, Percent_Identity=23.961661341853, Blast_Score=80, Evalue=6e-16, Organism=Drosophila melanogaster, GI21358471, Length=309, Percent_Identity=32.0388349514563, Blast_Score=135, Evalue=3e-32, Organism=Drosophila melanogaster, GI21355835, Length=289, Percent_Identity=27.3356401384083, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI17933642, Length=280, Percent_Identity=26.0714285714286, Blast_Score=82, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: =3.5.1.77 [H]
Molecular weight: Translated: 32583; Mature: 32583
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTDQVRIALVQMSCVENPQENLRKAQERIRQAAAGGANIVCLQELFTTLYFCQTEEYEP CCCCCEEEEEEEHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCC FGYAEPIPGPSTAALQELAAELGVVIVASLFEIRAKGVHHNTAAVIDADGSYLGKYRKMH CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHCCCC IPDDPGFYEKFYFVPGDLGYKVFDTKFGTIGVLICWDQWYPEAARLTALRGADILFYPTA CCCCCCCCCEEEECCCCCCCEEEECCCCEEEEEEEECCCCCCHHHHHHCCCCCEEEECCC IGWATSETSQEVRASQRQAWKTSHLGHAVANGVFVAAANRAGTEGELEFWGNSFVSDPFG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEECCCCCCCCHHH QVIAEAAHNSEEILYADCDLSKIGFYRSHWPFMRDRRIDSYGDITRRWIDE HHHHHHHCCCCCEEEEECCCHHHCCHHHCCCCHHHCCCCCHHHHHHHHCCC >Mature Secondary Structure MNTDQVRIALVQMSCVENPQENLRKAQERIRQAAAGGANIVCLQELFTTLYFCQTEEYEP CCCCCEEEEEEEHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCC FGYAEPIPGPSTAALQELAAELGVVIVASLFEIRAKGVHHNTAAVIDADGSYLGKYRKMH CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHCCCC IPDDPGFYEKFYFVPGDLGYKVFDTKFGTIGVLICWDQWYPEAARLTALRGADILFYPTA CCCCCCCCCEEEECCCCCCCEEEECCCCEEEEEEEECCCCCCHHHHHHCCCCCEEEECCC IGWATSETSQEVRASQRQAWKTSHLGHAVANGVFVAAANRAGTEGELEFWGNSFVSDPFG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEECCCCCCCCHHH QVIAEAAHNSEEILYADCDLSKIGFYRSHWPFMRDRRIDSYGDITRRWIDE HHHHHHHCCCCCEEEEECCCHHHCCHHHCCCCHHHCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9648217; 10903946 [H]