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The map label for this gene is yhfN [H]

Identifier: 21674329

GI number: 21674329

Start: 1415706

End: 1416953

Strand: Reverse

Name: yhfN [H]

Synonym: CT1509

Alternate gene names: 21674329

Gene position: 1416953-1415706 (Counterclockwise)

Preceding gene: 21674330

Following gene: 21674328

Centisome position: 65.75

GC content: 57.05

Gene sequence:

>1248_bases
ATGATGATGAACCTGTTCGGCCAAATCATTCTTTTTACGCTTATCGGCACCTGGCTCATCAAACTTGCCGCCGATCTTTT
GAACCTTCGTGCTGCGTCGCCGACGCTTCCTGAGGCGTTTCGCGACGTGTATGATCCGGCGGACTATCGCCGTTCGCAGG
AGTACCTCCGGGCCAACACCAAATTCTCACTTATCAGCTCGACTTTCGATCTCGCCCTGCTGCTCGTTTTCTGGTTCGCG
GGCGGCTTCAACGCGCTCGACCAGCTTATTCGCGCCTGGGGTTTCGATCCGGTCATCAACGGCGTGCTCTACATCGGCGC
GCTGCTGTTGCTTCAAAGCGTTGCCGACCTGCCGTTCAGCATCTACCACACCTTCGTGCTCGAAGAGCGCTTCGGCTTCA
ACCAGACCACGCCGAAGGTGTTCGTAATTGATCTCATCAAGACGCTTCTGCTTGCCGTGCTGATCGGCACACCGGTGCTG
GCGGCGATCCTCTGGTTTTTCCAGAGTGCCGGGCCGCTCGGCTGGCTCTGGGCGTGGGGGGGCGTGACAGCGTTCAGTCT
GCTTCTGCAATATGTTGCGCCGACCTGGATCATGCCGATGTTCAACAAGTTCGAGCCGCTCGAAGATGGCGAGCTTCGCA
AGTCGATCATGGATTACGCTGCCGAGGTGCGCTTTCCGCTCACCGGAATCTACGTCATGGACGGCTCCAAACGCTCGGCG
AAGGGCAACGCCTTTTTCACCGGATTCGGCAAGAACAAGCGCATCGTGCTGTTCGACACGCTCATCAAAAACCACTCGAC
CGGCGAGCTGGTCGCCGTGCTGGCCCATGAAATCGGCCACTTCAAGAAGAAGCACATTTTCATGTCGATGGGGCTCAGTA
TGCTCAACCTCGGCGTGGTTTTTTACCTGCTCTCACTCTTCATGAACAACCGGATGCTCTTTGATGCCTTCGCCATGCAG
GAGACTTCGGTCTATGCGAGCCTGCTTTTCTTCATGCTGCTCTACAATCCGGTGGAGTTCATCATTTCGATCCTGATGCA
GATGCTCTCGCGGCGCAACGAATTCGAGGCCGACAACTACGCCGTGAAGACGTACCGGAACGGCGCATTGCTGGCTGACG
CGCTCAAGAAGCTTTCGCGGCAGAACCTCTCGAACCTGACGCCGCACCCGTTTAACGTCTTCCTGAACTACTCTCATCCG
CCGGTGTTGCAGCGTGTTGAAAGGATCGAAGCGGCGGCCCGGCACTGA

Upstream 100 bases:

>100_bases
GAAGATCGGCTTTTACCGCTCGCACTGGCCCTTCATGCGCGACCGCAGGATCGACTCCTATGGCGACATCACGCGGCGCT
GGATCGACGAATAAACCGTT

Downstream 100 bases:

>100_bases
ACTATCTAATCCATTCCTGTCACCACATACCGATGAGCGAACCGACCTATTTCATGCCGCCTGAGTGGGCGCCGCACGCC
TCGACCTGGCTTTCGTGGCC

Product: CAAX prenyl protease 1, putative

Products: NA

Alternate protein names: PSP23 [H]

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MMMNLFGQIILFTLIGTWLIKLAADLLNLRAASPTLPEAFRDVYDPADYRRSQEYLRANTKFSLISSTFDLALLLVFWFA
GGFNALDQLIRAWGFDPVINGVLYIGALLLLQSVADLPFSIYHTFVLEERFGFNQTTPKVFVIDLIKTLLLAVLIGTPVL
AAILWFFQSAGPLGWLWAWGGVTAFSLLLQYVAPTWIMPMFNKFEPLEDGELRKSIMDYAAEVRFPLTGIYVMDGSKRSA
KGNAFFTGFGKNKRIVLFDTLIKNHSTGELVAVLAHEIGHFKKKHIFMSMGLSMLNLGVVFYLLSLFMNNRMLFDAFAMQ
ETSVYASLLFFMLLYNPVEFIISILMQMLSRRNEFEADNYAVKTYRNGALLADALKKLSRQNLSNLTPHPFNVFLNYSHP
PVLQRVERIEAAARH

Sequences:

>Translated_415_residues
MMMNLFGQIILFTLIGTWLIKLAADLLNLRAASPTLPEAFRDVYDPADYRRSQEYLRANTKFSLISSTFDLALLLVFWFA
GGFNALDQLIRAWGFDPVINGVLYIGALLLLQSVADLPFSIYHTFVLEERFGFNQTTPKVFVIDLIKTLLLAVLIGTPVL
AAILWFFQSAGPLGWLWAWGGVTAFSLLLQYVAPTWIMPMFNKFEPLEDGELRKSIMDYAAEVRFPLTGIYVMDGSKRSA
KGNAFFTGFGKNKRIVLFDTLIKNHSTGELVAVLAHEIGHFKKKHIFMSMGLSMLNLGVVFYLLSLFMNNRMLFDAFAMQ
ETSVYASLLFFMLLYNPVEFIISILMQMLSRRNEFEADNYAVKTYRNGALLADALKKLSRQNLSNLTPHPFNVFLNYSHP
PVLQRVERIEAAARH
>Mature_415_residues
MMMNLFGQIILFTLIGTWLIKLAADLLNLRAASPTLPEAFRDVYDPADYRRSQEYLRANTKFSLISSTFDLALLLVFWFA
GGFNALDQLIRAWGFDPVINGVLYIGALLLLQSVADLPFSIYHTFVLEERFGFNQTTPKVFVIDLIKTLLLAVLIGTPVL
AAILWFFQSAGPLGWLWAWGGVTAFSLLLQYVAPTWIMPMFNKFEPLEDGELRKSIMDYAAEVRFPLTGIYVMDGSKRSA
KGNAFFTGFGKNKRIVLFDTLIKNHSTGELVAVLAHEIGHFKKKHIFMSMGLSMLNLGVVFYLLSLFMNNRMLFDAFAMQ
ETSVYASLLFFMLLYNPVEFIISILMQMLSRRNEFEADNYAVKTYRNGALLADALKKLSRQNLSNLTPHPFNVFLNYSHP
PVLQRVERIEAAARH

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M48B family [H]

Homologues:

Organism=Homo sapiens, GI18379366, Length=462, Percent_Identity=30.7359307359307, Blast_Score=206, Evalue=5e-53,
Organism=Caenorhabditis elegans, GI17505484, Length=406, Percent_Identity=31.2807881773399, Blast_Score=187, Evalue=9e-48,
Organism=Saccharomyces cerevisiae, GI6322577, Length=423, Percent_Identity=35.2245862884161, Blast_Score=223, Evalue=5e-59,
Organism=Drosophila melanogaster, GI19922414, Length=403, Percent_Identity=31.7617866004963, Blast_Score=181, Evalue=8e-46,
Organism=Drosophila melanogaster, GI24654305, Length=294, Percent_Identity=26.8707482993197, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI78707252, Length=398, Percent_Identity=24.1206030150754, Blast_Score=93, Evalue=3e-19,
Organism=Drosophila melanogaster, GI78707254, Length=398, Percent_Identity=24.1206030150754, Blast_Score=93, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 47157; Mature: 47157

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMNLFGQIILFTLIGTWLIKLAADLLNLRAASPTLPEAFRDVYDPADYRRSQEYLRANT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCC
KFSLISSTFDLALLLVFWFAGGFNALDQLIRAWGFDPVINGVLYIGALLLLQSVADLPFS
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHH
IYHTFVLEERFGFNQTTPKVFVIDLIKTLLLAVLIGTPVLAAILWFFQSAGPLGWLWAWG
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
GVTAFSLLLQYVAPTWIMPMFNKFEPLEDGELRKSIMDYAAEVRFPLTGIYVMDGSKRSA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
KGNAFFTGFGKNKRIVLFDTLIKNHSTGELVAVLAHEIGHFKKKHIFMSMGLSMLNLGVV
CCCEEEEECCCCCEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYLLSLFMNNRMLFDAFAMQETSVYASLLFFMLLYNPVEFIISILMQMLSRRNEFEADNY
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
AVKTYRNGALLADALKKLSRQNLSNLTPHPFNVFLNYSHPPVLQRVERIEAAARH
EEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMMNLFGQIILFTLIGTWLIKLAADLLNLRAASPTLPEAFRDVYDPADYRRSQEYLRANT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCC
KFSLISSTFDLALLLVFWFAGGFNALDQLIRAWGFDPVINGVLYIGALLLLQSVADLPFS
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHH
IYHTFVLEERFGFNQTTPKVFVIDLIKTLLLAVLIGTPVLAAILWFFQSAGPLGWLWAWG
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
GVTAFSLLLQYVAPTWIMPMFNKFEPLEDGELRKSIMDYAAEVRFPLTGIYVMDGSKRSA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
KGNAFFTGFGKNKRIVLFDTLIKNHSTGELVAVLAHEIGHFKKKHIFMSMGLSMLNLGVV
CCCEEEEECCCCCEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYLLSLFMNNRMLFDAFAMQETSVYASLLFFMLLYNPVEFIISILMQMLSRRNEFEADNY
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
AVKTYRNGALLADALKKLSRQNLSNLTPHPFNVFLNYSHPPVLQRVERIEAAARH
EEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377; 3145906 [H]