| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is obg [H]
Identifier: 21674261
GI number: 21674261
Start: 1349976
End: 1350914
Strand: Reverse
Name: obg [H]
Synonym: CT1440
Alternate gene names: 21674261
Gene position: 1350914-1349976 (Counterclockwise)
Preceding gene: 21674262
Following gene: 21674259
Centisome position: 62.69
GC content: 58.79
Gene sequence:
>939_bases ATGACCTATGTTTTCGGACCCGTCTCCTCCAAGCGTCTCGGCCAGTCGCTTGGTGTCGATCTGTTGCCATCCAAAAGCTG CACCTGGAACTGCATCTACTGCCAGCTTGGCCGCACGACGGCGTTCGTAACGGAGCGGCGTGAATTTTTCCCGAAAGAGG AGATTCTCTCGGAGATTCTCGAAACGGTCGCGAGCGGCAAGCCGATCGACTGGATCACCTTTGTCGGCTCCGGCGAGACG ACGCTCTACAAAGGGCTCGACTGGCTGATTGCCGAAGTCAAAAAAATCTCGAAAATCCCGGTGGCGGTCATTACCAACGG CTCGCTCTTGAGTGATCCGGAAGTCCGTCGGGAGCTGCTCGAAGCCGATGCTGTGCTGCCGTCGCTCAACGCAGGTTCAC CAGAGCTGTTCGAGCGCATCGACCGCCCTGCGCCTGGCTTTACCTTCGAGAAACATGTCGAGGGTTTGAGGCTTTTTCGG CAGGAGTATCGCGGCAAGCTCTGGGTCGAGGTGATGCTCATCAGAGGAGTGAACGATTCGGAGGAGGCGCTGAAGGAAAT GGCGGCGGTGCTTGCGGAGATTCGTCCCGACATGATTCATCTCGTTATGCCGACCCGCCCCGCGCCCGAAAGCTTTGTCG GCATTCCGGACGAAGAACTCATCCAGCGCGCGGTTTTCGTTCTTTCCTCTTCCGCTCCGGTGCTGCATCCCGCCAAGGGG GAAATGAACCTTGGTTCGGTGGGCAACTTGCTCGACACCGTTGCGGGCATCGCCTCGCGCCACCCGGTACAGGAACGCGA ACTTGAAGCGGCTCTCGGCAAGCTTTTTGACGGCGACGCCGCGAAAATCCGCGAAACAATGGGCGAGCTGCTCGCCTCGG GTCGCTTCGAGAAAGTCCGGCAGGGCAGCGAGCTGTACTGGATCGTTAAATCGGCATAA
Upstream 100 bases:
>100_bases CGCACGTGTCGCGCGAGGCATTCGAAGCGGAGAGTGCCGAGAAAATGTTGGAACTTGAAGCCGCCGCAGAAGCGGGCTGA TCATAAAAAGGAGCTTTGCC
Downstream 100 bases:
>100_bases CCCGGGTGCTTAACCGCTGCATTCGACAGCAGAAAACGGCTCGGCACCCGGAGATGGTCATGCCTGGCCGGGGTCAGTAT TAGGGTTTCCACGAATCGCT
Product: MoaA/NifB/PqqE family protein
Products: NA
Alternate protein names: GTP-binding protein obg [H]
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MTYVFGPVSSKRLGQSLGVDLLPSKSCTWNCIYCQLGRTTAFVTERREFFPKEEILSEILETVASGKPIDWITFVGSGET TLYKGLDWLIAEVKKISKIPVAVITNGSLLSDPEVRRELLEADAVLPSLNAGSPELFERIDRPAPGFTFEKHVEGLRLFR QEYRGKLWVEVMLIRGVNDSEEALKEMAAVLAEIRPDMIHLVMPTRPAPESFVGIPDEELIQRAVFVLSSSAPVLHPAKG EMNLGSVGNLLDTVAGIASRHPVQERELEAALGKLFDGDAAKIRETMGELLASGRFEKVRQGSELYWIVKSA
Sequences:
>Translated_312_residues MTYVFGPVSSKRLGQSLGVDLLPSKSCTWNCIYCQLGRTTAFVTERREFFPKEEILSEILETVASGKPIDWITFVGSGET TLYKGLDWLIAEVKKISKIPVAVITNGSLLSDPEVRRELLEADAVLPSLNAGSPELFERIDRPAPGFTFEKHVEGLRLFR QEYRGKLWVEVMLIRGVNDSEEALKEMAAVLAEIRPDMIHLVMPTRPAPESFVGIPDEELIQRAVFVLSSSAPVLHPAKG EMNLGSVGNLLDTVAGIASRHPVQERELEAALGKLFDGDAAKIRETMGELLASGRFEKVRQGSELYWIVKSA >Mature_311_residues TYVFGPVSSKRLGQSLGVDLLPSKSCTWNCIYCQLGRTTAFVTERREFFPKEEILSEILETVASGKPIDWITFVGSGETT LYKGLDWLIAEVKKISKIPVAVITNGSLLSDPEVRRELLEADAVLPSLNAGSPELFERIDRPAPGFTFEKHVEGLRLFRQ EYRGKLWVEVMLIRGVNDSEEALKEMAAVLAEIRPDMIHLVMPTRPAPESFVGIPDEELIQRAVFVLSSSAPVLHPAKGE MNLGSVGNLLDTVAGIASRHPVQERELEAALGKLFDGDAAKIRETMGELLASGRFEKVRQGSELYWIVKSA
Specific function: An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. It may play a role in control of the cell cycle, stress response, ribosome biogenesis and in t
COG id: COG0731
COG function: function code C; Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR014100 - InterPro: IPR006074 - InterPro: IPR006073 - InterPro: IPR006169 - InterPro: IPR002917 - InterPro: IPR007197 [H]
Pfam domain/function: PF01018 GTP1_OBG; PF01926 MMR_HSR1; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 34525; Mature: 34394
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYVFGPVSSKRLGQSLGVDLLPSKSCTWNCIYCQLGRTTAFVTERREFFPKEEILSEIL CCEEECCCCHHHHHHHCCCEECCCCCCEEEEEEEEECCHHHHHHHHHHHCCHHHHHHHHH ETVASGKPIDWITFVGSGETTLYKGLDWLIAEVKKISKIPVAVITNGSLLSDPEVRRELL HHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHH EADAVLPSLNAGSPELFERIDRPAPGFTFEKHVEGLRLFRQEYRGKLWVEVMLIRGVNDS HHHHHCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCH EEALKEMAAVLAEIRPDMIHLVMPTRPAPESFVGIPDEELIQRAVFVLSSSAPVLHPAKG HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCC EMNLGSVGNLLDTVAGIASRHPVQERELEAALGKLFDGDAAKIRETMGELLASGRFEKVR CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHH QGSELYWIVKSA CCCCEEEEEECC >Mature Secondary Structure TYVFGPVSSKRLGQSLGVDLLPSKSCTWNCIYCQLGRTTAFVTERREFFPKEEILSEIL CEEECCCCHHHHHHHCCCEECCCCCCEEEEEEEEECCHHHHHHHHHHHCCHHHHHHHHH ETVASGKPIDWITFVGSGETTLYKGLDWLIAEVKKISKIPVAVITNGSLLSDPEVRRELL HHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHH EADAVLPSLNAGSPELFERIDRPAPGFTFEKHVEGLRLFRQEYRGKLWVEVMLIRGVNDS HHHHHCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCH EEALKEMAAVLAEIRPDMIHLVMPTRPAPESFVGIPDEELIQRAVFVLSSSAPVLHPAKG HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCC EMNLGSVGNLLDTVAGIASRHPVQERELEAALGKLFDGDAAKIRETMGELLASGRFEKVR CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHH QGSELYWIVKSA CCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA