Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is pucC [H]

Identifier: 21674262

GI number: 21674262

Start: 1350935

End: 1352638

Strand: Reverse

Name: pucC [H]

Synonym: CT1441

Alternate gene names: 21674262

Gene position: 1352638-1350935 (Counterclockwise)

Preceding gene: 21674264

Following gene: 21674261

Centisome position: 62.77

GC content: 56.46

Gene sequence:

>1704_bases
ATGGAGCGAGTCAGAAAGAAAAGCAGGAATCCGGAGTCGGAAGGGACGGTGAAGCAGGATTTGGAGATGCGTGCTTCATC
TTTCCTTGCGTCAGCATTACCTGCATCAAGTTATAGGGGTGTGATCTCAGCTTCGGTTCATGGAACATGGCGAAGCACCC
CCAAGATGATTTTCGACGCTCACGAGGAAGCGCCTTTTGAAAATCATGATAACCAAATTCACCCTGATTTCCAAGGATGG
CCGCAGGACGCAATCCTTGAGAAAGCAAGGGTTTTGTGTAAATTATGGCCTTGTTTGATGAAGAGGCTTTCAGACAGTTC
CAATCCATTTCCGCGCTTCATGAATAAATTCTTTCGGATTTTCAATCTTGTCCGGCTCTCGCTGTTTCAGATAGGGTTCG
GCATCATGCTCGGCTTTGTGCAAGACATCTTGAACCGGGTCATGATCAAGGAGCTGTTCCTGCCCGCGACCATCGCGCTT
GGCCTGATCAGTCTCAAGGAGCTTTTGGCCATTCTCGGCGTCAAGGTGTGGGCGGGCAACCTCTCCGACCGTTACGCCAT
CTTCGGCTATCGGCGTACGCCATATGTGCTTATCGGCCTGGTGAGCTGCATTGTCTCCTTCATCCTCGCGCCGACGACGG
CCTACGAGGTGCGGCTCGATGGAACGGGAAGCCTCGTCAGCATCATCTTTTCCGCGCTTGGCGATGTAGGCCTCTGGAAG
CTCAGCGCCATCTTCCTCGTTTTCGGCTTCGGCCTCCAGGTCGCCACGACAGCCTACTACGCCCTGATTGCCGACATGGT
TGACGAAAAAGATATCGGCAAGATTGCCGGGGCGAGCTGGACGCTCATGGTGCTGACGGCCATCATTTCGAATTACTCCA
TCGGCAGTTATCTCAAAGTGTTCACGCCGGAGCGGCTGACGCAGGTGGCCGAAATTGGCGGCCTTGTCGCACTTACCTTC
GGCCTCATTGCCGTGCTTGGCGTTGAGCGCCGGAACGCCGGGGTCGGCGTTCACAAGGAGAAGCACAGTATTCCCTTTTC
ACAGGCGATCCGCCTGCTCGCGTCGTCGCCCAACACGATGCTTTTCGCGCTCTACATCTTCATCTCCATTTTCGCCCTTT
TCGCCAACGAGGTGGTGATGGATCCCTTTGGCGCGGAGGTGTTCGGGATGCAGGTTTCTGAAACGACCAAGCTTTTCAAG
CCGGTGATGGGCGGCACGCAGCTCATCTTCATGCTGCTGACCGGTTTTTTGCTCTCCCGCATCGGCACGCGGCGCGGCGC
CTATTTCGGTAACGTGTTCGGTGCGGTAGGCTTCGGGCTGATTATCGCTGCCGGGTTCATGCACGACGTGCAGTTTCTGC
GTATCGCGCTGGTCGTGACCGGCATCGGCCTCGGCGCGGCGAGCGTCTCGAACATCACCATGATGATGAACATGACCGCC
GGGCGCAGCGGTATTTACATGGGGTTGTGGGGGACCGCGCAGAGCCTCGCTATCTTCATCGGCCATTCGAGCGCGGGCGT
GATTCGCGACCTCGTCTTCCACTTTTCGGGCAACCACATGTTGGCCTACGCGGCGATTTTCGTGCTCGAAATCATCGCCT
TCACCATTTCCAGCCTGGTGCTGCCGCACGTGTCGCGCGAGGCATTCGAAGCGGAGAGTGCCGAGAAAATGTTGGAACTT
GAAGCCGCCGCAGAAGCGGGCTGA

Upstream 100 bases:

>100_bases
CATGCCGACCTCGATCGGGTAGATGGTGCCTTTGACGGTGATTCGGGATGATGCAGGGCCGAAAAAGTGTTTTTTGGGGC
AGGATGCGTTCTCTTGGTTC

Downstream 100 bases:

>100_bases
TCATAAAAAGGAGCTTTGCCATGACCTATGTTTTCGGACCCGTCTCCTCCAAGCGTCTCGGCCAGTCGCTTGGTGTCGAT
CTGTTGCCATCCAAAAGCTG

Product: PucC protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 567; Mature: 567

Protein sequence:

>567_residues
MERVRKKSRNPESEGTVKQDLEMRASSFLASALPASSYRGVISASVHGTWRSTPKMIFDAHEEAPFENHDNQIHPDFQGW
PQDAILEKARVLCKLWPCLMKRLSDSSNPFPRFMNKFFRIFNLVRLSLFQIGFGIMLGFVQDILNRVMIKELFLPATIAL
GLISLKELLAILGVKVWAGNLSDRYAIFGYRRTPYVLIGLVSCIVSFILAPTTAYEVRLDGTGSLVSIIFSALGDVGLWK
LSAIFLVFGFGLQVATTAYYALIADMVDEKDIGKIAGASWTLMVLTAIISNYSIGSYLKVFTPERLTQVAEIGGLVALTF
GLIAVLGVERRNAGVGVHKEKHSIPFSQAIRLLASSPNTMLFALYIFISIFALFANEVVMDPFGAEVFGMQVSETTKLFK
PVMGGTQLIFMLLTGFLLSRIGTRRGAYFGNVFGAVGFGLIIAAGFMHDVQFLRIALVVTGIGLGAASVSNITMMMNMTA
GRSGIYMGLWGTAQSLAIFIGHSSAGVIRDLVFHFSGNHMLAYAAIFVLEIIAFTISSLVLPHVSREAFEAESAEKMLEL
EAAAEAG

Sequences:

>Translated_567_residues
MERVRKKSRNPESEGTVKQDLEMRASSFLASALPASSYRGVISASVHGTWRSTPKMIFDAHEEAPFENHDNQIHPDFQGW
PQDAILEKARVLCKLWPCLMKRLSDSSNPFPRFMNKFFRIFNLVRLSLFQIGFGIMLGFVQDILNRVMIKELFLPATIAL
GLISLKELLAILGVKVWAGNLSDRYAIFGYRRTPYVLIGLVSCIVSFILAPTTAYEVRLDGTGSLVSIIFSALGDVGLWK
LSAIFLVFGFGLQVATTAYYALIADMVDEKDIGKIAGASWTLMVLTAIISNYSIGSYLKVFTPERLTQVAEIGGLVALTF
GLIAVLGVERRNAGVGVHKEKHSIPFSQAIRLLASSPNTMLFALYIFISIFALFANEVVMDPFGAEVFGMQVSETTKLFK
PVMGGTQLIFMLLTGFLLSRIGTRRGAYFGNVFGAVGFGLIIAAGFMHDVQFLRIALVVTGIGLGAASVSNITMMMNMTA
GRSGIYMGLWGTAQSLAIFIGHSSAGVIRDLVFHFSGNHMLAYAAIFVLEIIAFTISSLVLPHVSREAFEAESAEKMLEL
EAAAEAG
>Mature_567_residues
MERVRKKSRNPESEGTVKQDLEMRASSFLASALPASSYRGVISASVHGTWRSTPKMIFDAHEEAPFENHDNQIHPDFQGW
PQDAILEKARVLCKLWPCLMKRLSDSSNPFPRFMNKFFRIFNLVRLSLFQIGFGIMLGFVQDILNRVMIKELFLPATIAL
GLISLKELLAILGVKVWAGNLSDRYAIFGYRRTPYVLIGLVSCIVSFILAPTTAYEVRLDGTGSLVSIIFSALGDVGLWK
LSAIFLVFGFGLQVATTAYYALIADMVDEKDIGKIAGASWTLMVLTAIISNYSIGSYLKVFTPERLTQVAEIGGLVALTF
GLIAVLGVERRNAGVGVHKEKHSIPFSQAIRLLASSPNTMLFALYIFISIFALFANEVVMDPFGAEVFGMQVSETTKLFK
PVMGGTQLIFMLLTGFLLSRIGTRRGAYFGNVFGAVGFGLIIAAGFMHDVQFLRIALVVTGIGLGAASVSNITMMMNMTA
GRSGIYMGLWGTAQSLAIFIGHSSAGVIRDLVFHFSGNHMLAYAAIFVLEIIAFTISSLVLPHVSREAFEAESAEKMLEL
EAAAEAG

Specific function: PucC is required for high-level transcription of the puc operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pucC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016196
- InterPro:   IPR004896 [H]

Pfam domain/function: PF03209 PUCC [H]

EC number: NA

Molecular weight: Translated: 61978; Mature: 61978

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERVRKKSRNPESEGTVKQDLEMRASSFLASALPASSYRGVISASVHGTWRSTPKMIFDA
CCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHCC
HEEAPFENHDNQIHPDFQGWPQDAILEKARVLCKLWPCLMKRLSDSSNPFPRFMNKFFRI
HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
FNLVRLSLFQIGFGIMLGFVQDILNRVMIKELFLPATIALGLISLKELLAILGVKVWAGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LSDRYAIFGYRRTPYVLIGLVSCIVSFILAPTTAYEVRLDGTGSLVSIIFSALGDVGLWK
CCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCHHHH
LSAIFLVFGFGLQVATTAYYALIADMVDEKDIGKIAGASWTLMVLTAIISNYSIGSYLKV
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHH
FTPERLTQVAEIGGLVALTFGLIAVLGVERRNAGVGVHKEKHSIPFSQAIRLLASSPNTM
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCHHHHHHHHHCCCCHH
LFALYIFISIFALFANEVVMDPFGAEVFGMQVSETTKLFKPVMGGTQLIFMLLTGFLLSR
HHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
IGTRRGAYFGNVFGAVGFGLIIAAGFMHDVQFLRIALVVTGIGLGAASVSNITMMMNMTA
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEEECC
GRSGIYMGLWGTAQSLAIFIGHSSAGVIRDLVFHFSGNHMLAYAAIFVLEIIAFTISSLV
CCCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LPHVSREAFEAESAEKMLELEAAAEAG
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MERVRKKSRNPESEGTVKQDLEMRASSFLASALPASSYRGVISASVHGTWRSTPKMIFDA
CCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHCC
HEEAPFENHDNQIHPDFQGWPQDAILEKARVLCKLWPCLMKRLSDSSNPFPRFMNKFFRI
HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
FNLVRLSLFQIGFGIMLGFVQDILNRVMIKELFLPATIALGLISLKELLAILGVKVWAGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LSDRYAIFGYRRTPYVLIGLVSCIVSFILAPTTAYEVRLDGTGSLVSIIFSALGDVGLWK
CCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCHHHH
LSAIFLVFGFGLQVATTAYYALIADMVDEKDIGKIAGASWTLMVLTAIISNYSIGSYLKV
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHH
FTPERLTQVAEIGGLVALTFGLIAVLGVERRNAGVGVHKEKHSIPFSQAIRLLASSPNTM
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCHHHHHHHHHCCCCHH
LFALYIFISIFALFANEVVMDPFGAEVFGMQVSETTKLFKPVMGGTQLIFMLLTGFLLSR
HHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
IGTRRGAYFGNVFGAVGFGLIIAAGFMHDVQFLRIALVVTGIGLGAASVSNITMMMNMTA
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEEECC
GRSGIYMGLWGTAQSLAIFIGHSSAGVIRDLVFHFSGNHMLAYAAIFVLEIIAFTISSLV
CCCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LPHVSREAFEAESAEKMLELEAAAEAG
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1453956; 10648776 [H]