| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is pucC [H]
Identifier: 21674262
GI number: 21674262
Start: 1350935
End: 1352638
Strand: Reverse
Name: pucC [H]
Synonym: CT1441
Alternate gene names: 21674262
Gene position: 1352638-1350935 (Counterclockwise)
Preceding gene: 21674264
Following gene: 21674261
Centisome position: 62.77
GC content: 56.46
Gene sequence:
>1704_bases ATGGAGCGAGTCAGAAAGAAAAGCAGGAATCCGGAGTCGGAAGGGACGGTGAAGCAGGATTTGGAGATGCGTGCTTCATC TTTCCTTGCGTCAGCATTACCTGCATCAAGTTATAGGGGTGTGATCTCAGCTTCGGTTCATGGAACATGGCGAAGCACCC CCAAGATGATTTTCGACGCTCACGAGGAAGCGCCTTTTGAAAATCATGATAACCAAATTCACCCTGATTTCCAAGGATGG CCGCAGGACGCAATCCTTGAGAAAGCAAGGGTTTTGTGTAAATTATGGCCTTGTTTGATGAAGAGGCTTTCAGACAGTTC CAATCCATTTCCGCGCTTCATGAATAAATTCTTTCGGATTTTCAATCTTGTCCGGCTCTCGCTGTTTCAGATAGGGTTCG GCATCATGCTCGGCTTTGTGCAAGACATCTTGAACCGGGTCATGATCAAGGAGCTGTTCCTGCCCGCGACCATCGCGCTT GGCCTGATCAGTCTCAAGGAGCTTTTGGCCATTCTCGGCGTCAAGGTGTGGGCGGGCAACCTCTCCGACCGTTACGCCAT CTTCGGCTATCGGCGTACGCCATATGTGCTTATCGGCCTGGTGAGCTGCATTGTCTCCTTCATCCTCGCGCCGACGACGG CCTACGAGGTGCGGCTCGATGGAACGGGAAGCCTCGTCAGCATCATCTTTTCCGCGCTTGGCGATGTAGGCCTCTGGAAG CTCAGCGCCATCTTCCTCGTTTTCGGCTTCGGCCTCCAGGTCGCCACGACAGCCTACTACGCCCTGATTGCCGACATGGT TGACGAAAAAGATATCGGCAAGATTGCCGGGGCGAGCTGGACGCTCATGGTGCTGACGGCCATCATTTCGAATTACTCCA TCGGCAGTTATCTCAAAGTGTTCACGCCGGAGCGGCTGACGCAGGTGGCCGAAATTGGCGGCCTTGTCGCACTTACCTTC GGCCTCATTGCCGTGCTTGGCGTTGAGCGCCGGAACGCCGGGGTCGGCGTTCACAAGGAGAAGCACAGTATTCCCTTTTC ACAGGCGATCCGCCTGCTCGCGTCGTCGCCCAACACGATGCTTTTCGCGCTCTACATCTTCATCTCCATTTTCGCCCTTT TCGCCAACGAGGTGGTGATGGATCCCTTTGGCGCGGAGGTGTTCGGGATGCAGGTTTCTGAAACGACCAAGCTTTTCAAG CCGGTGATGGGCGGCACGCAGCTCATCTTCATGCTGCTGACCGGTTTTTTGCTCTCCCGCATCGGCACGCGGCGCGGCGC CTATTTCGGTAACGTGTTCGGTGCGGTAGGCTTCGGGCTGATTATCGCTGCCGGGTTCATGCACGACGTGCAGTTTCTGC GTATCGCGCTGGTCGTGACCGGCATCGGCCTCGGCGCGGCGAGCGTCTCGAACATCACCATGATGATGAACATGACCGCC GGGCGCAGCGGTATTTACATGGGGTTGTGGGGGACCGCGCAGAGCCTCGCTATCTTCATCGGCCATTCGAGCGCGGGCGT GATTCGCGACCTCGTCTTCCACTTTTCGGGCAACCACATGTTGGCCTACGCGGCGATTTTCGTGCTCGAAATCATCGCCT TCACCATTTCCAGCCTGGTGCTGCCGCACGTGTCGCGCGAGGCATTCGAAGCGGAGAGTGCCGAGAAAATGTTGGAACTT GAAGCCGCCGCAGAAGCGGGCTGA
Upstream 100 bases:
>100_bases CATGCCGACCTCGATCGGGTAGATGGTGCCTTTGACGGTGATTCGGGATGATGCAGGGCCGAAAAAGTGTTTTTTGGGGC AGGATGCGTTCTCTTGGTTC
Downstream 100 bases:
>100_bases TCATAAAAAGGAGCTTTGCCATGACCTATGTTTTCGGACCCGTCTCCTCCAAGCGTCTCGGCCAGTCGCTTGGTGTCGAT CTGTTGCCATCCAAAAGCTG
Product: PucC protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 567; Mature: 567
Protein sequence:
>567_residues MERVRKKSRNPESEGTVKQDLEMRASSFLASALPASSYRGVISASVHGTWRSTPKMIFDAHEEAPFENHDNQIHPDFQGW PQDAILEKARVLCKLWPCLMKRLSDSSNPFPRFMNKFFRIFNLVRLSLFQIGFGIMLGFVQDILNRVMIKELFLPATIAL GLISLKELLAILGVKVWAGNLSDRYAIFGYRRTPYVLIGLVSCIVSFILAPTTAYEVRLDGTGSLVSIIFSALGDVGLWK LSAIFLVFGFGLQVATTAYYALIADMVDEKDIGKIAGASWTLMVLTAIISNYSIGSYLKVFTPERLTQVAEIGGLVALTF GLIAVLGVERRNAGVGVHKEKHSIPFSQAIRLLASSPNTMLFALYIFISIFALFANEVVMDPFGAEVFGMQVSETTKLFK PVMGGTQLIFMLLTGFLLSRIGTRRGAYFGNVFGAVGFGLIIAAGFMHDVQFLRIALVVTGIGLGAASVSNITMMMNMTA GRSGIYMGLWGTAQSLAIFIGHSSAGVIRDLVFHFSGNHMLAYAAIFVLEIIAFTISSLVLPHVSREAFEAESAEKMLEL EAAAEAG
Sequences:
>Translated_567_residues MERVRKKSRNPESEGTVKQDLEMRASSFLASALPASSYRGVISASVHGTWRSTPKMIFDAHEEAPFENHDNQIHPDFQGW PQDAILEKARVLCKLWPCLMKRLSDSSNPFPRFMNKFFRIFNLVRLSLFQIGFGIMLGFVQDILNRVMIKELFLPATIAL GLISLKELLAILGVKVWAGNLSDRYAIFGYRRTPYVLIGLVSCIVSFILAPTTAYEVRLDGTGSLVSIIFSALGDVGLWK LSAIFLVFGFGLQVATTAYYALIADMVDEKDIGKIAGASWTLMVLTAIISNYSIGSYLKVFTPERLTQVAEIGGLVALTF GLIAVLGVERRNAGVGVHKEKHSIPFSQAIRLLASSPNTMLFALYIFISIFALFANEVVMDPFGAEVFGMQVSETTKLFK PVMGGTQLIFMLLTGFLLSRIGTRRGAYFGNVFGAVGFGLIIAAGFMHDVQFLRIALVVTGIGLGAASVSNITMMMNMTA GRSGIYMGLWGTAQSLAIFIGHSSAGVIRDLVFHFSGNHMLAYAAIFVLEIIAFTISSLVLPHVSREAFEAESAEKMLEL EAAAEAG >Mature_567_residues MERVRKKSRNPESEGTVKQDLEMRASSFLASALPASSYRGVISASVHGTWRSTPKMIFDAHEEAPFENHDNQIHPDFQGW PQDAILEKARVLCKLWPCLMKRLSDSSNPFPRFMNKFFRIFNLVRLSLFQIGFGIMLGFVQDILNRVMIKELFLPATIAL GLISLKELLAILGVKVWAGNLSDRYAIFGYRRTPYVLIGLVSCIVSFILAPTTAYEVRLDGTGSLVSIIFSALGDVGLWK LSAIFLVFGFGLQVATTAYYALIADMVDEKDIGKIAGASWTLMVLTAIISNYSIGSYLKVFTPERLTQVAEIGGLVALTF GLIAVLGVERRNAGVGVHKEKHSIPFSQAIRLLASSPNTMLFALYIFISIFALFANEVVMDPFGAEVFGMQVSETTKLFK PVMGGTQLIFMLLTGFLLSRIGTRRGAYFGNVFGAVGFGLIIAAGFMHDVQFLRIALVVTGIGLGAASVSNITMMMNMTA GRSGIYMGLWGTAQSLAIFIGHSSAGVIRDLVFHFSGNHMLAYAAIFVLEIIAFTISSLVLPHVSREAFEAESAEKMLEL EAAAEAG
Specific function: PucC is required for high-level transcription of the puc operon [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pucC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016196 - InterPro: IPR004896 [H]
Pfam domain/function: PF03209 PUCC [H]
EC number: NA
Molecular weight: Translated: 61978; Mature: 61978
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERVRKKSRNPESEGTVKQDLEMRASSFLASALPASSYRGVISASVHGTWRSTPKMIFDA CCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHCC HEEAPFENHDNQIHPDFQGWPQDAILEKARVLCKLWPCLMKRLSDSSNPFPRFMNKFFRI HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH FNLVRLSLFQIGFGIMLGFVQDILNRVMIKELFLPATIALGLISLKELLAILGVKVWAGN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LSDRYAIFGYRRTPYVLIGLVSCIVSFILAPTTAYEVRLDGTGSLVSIIFSALGDVGLWK CCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCHHHH LSAIFLVFGFGLQVATTAYYALIADMVDEKDIGKIAGASWTLMVLTAIISNYSIGSYLKV HHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHH FTPERLTQVAEIGGLVALTFGLIAVLGVERRNAGVGVHKEKHSIPFSQAIRLLASSPNTM CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCHHHHHHHHHCCCCHH LFALYIFISIFALFANEVVMDPFGAEVFGMQVSETTKLFKPVMGGTQLIFMLLTGFLLSR HHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH IGTRRGAYFGNVFGAVGFGLIIAAGFMHDVQFLRIALVVTGIGLGAASVSNITMMMNMTA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEEECC GRSGIYMGLWGTAQSLAIFIGHSSAGVIRDLVFHFSGNHMLAYAAIFVLEIIAFTISSLV CCCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LPHVSREAFEAESAEKMLELEAAAEAG HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MERVRKKSRNPESEGTVKQDLEMRASSFLASALPASSYRGVISASVHGTWRSTPKMIFDA CCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHCC HEEAPFENHDNQIHPDFQGWPQDAILEKARVLCKLWPCLMKRLSDSSNPFPRFMNKFFRI HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH FNLVRLSLFQIGFGIMLGFVQDILNRVMIKELFLPATIALGLISLKELLAILGVKVWAGN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LSDRYAIFGYRRTPYVLIGLVSCIVSFILAPTTAYEVRLDGTGSLVSIIFSALGDVGLWK CCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCHHHH LSAIFLVFGFGLQVATTAYYALIADMVDEKDIGKIAGASWTLMVLTAIISNYSIGSYLKV HHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHH FTPERLTQVAEIGGLVALTFGLIAVLGVERRNAGVGVHKEKHSIPFSQAIRLLASSPNTM CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCHHHHHHHHHCCCCHH LFALYIFISIFALFANEVVMDPFGAEVFGMQVSETTKLFKPVMGGTQLIFMLLTGFLLSR HHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH IGTRRGAYFGNVFGAVGFGLIIAAGFMHDVQFLRIALVVTGIGLGAASVSNITMMMNMTA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEEECC GRSGIYMGLWGTAQSLAIFIGHSSAGVIRDLVFHFSGNHMLAYAAIFVLEIIAFTISSLV CCCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LPHVSREAFEAESAEKMLELEAAAEAG HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1453956; 10648776 [H]