| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674221
Identifier: 21674221
GI number: 21674221
Start: 1313781
End: 1314467
Strand: Reverse
Name: 21674221
Synonym: CT1400
Alternate gene names: NA
Gene position: 1314467-1313781 (Counterclockwise)
Preceding gene: 21674224
Following gene: 21674220
Centisome position: 61.0
GC content: 54.73
Gene sequence:
>687_bases TTGATTGGTCATTCAGAGGTAATCCGTTGCTTCGGAATGTCCGGAAAAGTTTATTTTTTTAACGATTCGGGGAATATACA AAAGGGTGTGCATGATTTGCCGCCAAAAGGTTTAGCCTGTTTCGTGAAAATTAAAAATATGATGATGCAAGCCAAACCTG CAGAGGTGTCAATGGTCGATGCGCTGGTCGATCCCTGGCTGGGAGCGATCGGGCGTGATTTTGAAGGCTACCGCAACCAT TGCCGCCGGGTGTTCATCTTTGCCTGCACGCTTGCCGGAGCGGAAGGGGAGAGCCGCGAGAAAATCGCTATCGCCGCTGC GTTTCACGACCTCGGCATCTGGACGGACAATACCTTCGACTATCTTGAACCCTCCAAGCGGCTCGCCAGTGCTTATCTCG CTTCGACGAGCAAGGCCGAGTGGACGGATGAGATCAAAGCGATGATCGAACAGCACCACAAGGTCACCCCGTGGAGTTGC AAGCCCGGCTGGCTTGTCGAGCCGTTCCGCAAAGCCGACTGGATCGACGTCACCCTCGGCGCCCGCAACTTCGAGCTCAA CCGTAGCTACATCCGCGAAATCCAACGTCGCTATCCCAATGCCGGATTCCATGCTACGCTCGCCCGCCTGAGCTTTGAGC GGATGAAAACGCATCCGAAAGATCCGCTGCCGATGATGCGGTGGTAG
Upstream 100 bases:
>100_bases AGCGTGATCAGTGCTGTCACCACAAGGCTCGCCGCCCATGCCAATCCTATGCTTTTGCTCGCTTCTTTTTCGTCCCTGTT CATCATGAGCGCCTCAATGG
Downstream 100 bases:
>100_bases GGTAAGCGAAGCGGCAGTTCAGCGATGAATGTGTGGAAATGGAGTTTAAAATCGATATAAAATGGTGTTTTGGCTTACCT GTTTTTGATCGATATATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MIGHSEVIRCFGMSGKVYFFNDSGNIQKGVHDLPPKGLACFVKIKNMMMQAKPAEVSMVDALVDPWLGAIGRDFEGYRNH CRRVFIFACTLAGAEGESREKIAIAAAFHDLGIWTDNTFDYLEPSKRLASAYLASTSKAEWTDEIKAMIEQHHKVTPWSC KPGWLVEPFRKADWIDVTLGARNFELNRSYIREIQRRYPNAGFHATLARLSFERMKTHPKDPLPMMRW
Sequences:
>Translated_228_residues MIGHSEVIRCFGMSGKVYFFNDSGNIQKGVHDLPPKGLACFVKIKNMMMQAKPAEVSMVDALVDPWLGAIGRDFEGYRNH CRRVFIFACTLAGAEGESREKIAIAAAFHDLGIWTDNTFDYLEPSKRLASAYLASTSKAEWTDEIKAMIEQHHKVTPWSC KPGWLVEPFRKADWIDVTLGARNFELNRSYIREIQRRYPNAGFHATLARLSFERMKTHPKDPLPMMRW >Mature_228_residues MIGHSEVIRCFGMSGKVYFFNDSGNIQKGVHDLPPKGLACFVKIKNMMMQAKPAEVSMVDALVDPWLGAIGRDFEGYRNH CRRVFIFACTLAGAEGESREKIAIAAAFHDLGIWTDNTFDYLEPSKRLASAYLASTSKAEWTDEIKAMIEQHHKVTPWSC KPGWLVEPFRKADWIDVTLGARNFELNRSYIREIQRRYPNAGFHATLARLSFERMKTHPKDPLPMMRW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26086; Mature: 26086
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGHSEVIRCFGMSGKVYFFNDSGNIQKGVHDLPPKGLACFVKIKNMMMQAKPAEVSMVD CCCHHHHHHHCCCCCEEEEECCCCCHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHH ALVDPWLGAIGRDFEGYRNHCRRVFIFACTLAGAEGESREKIAIAAAFHDLGIWTDNTFD HHHHHHHHHHCCCCHHHHHHHHEEHHHEEEECCCCCCCCCEEEEEEEHHHCCCCCCCCHH YLEPSKRLASAYLASTSKAEWTDEIKAMIEQHHKVTPWSCKPGWLVEPFRKADWIDVTLG HCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEC ARNFELNRSYIREIQRRYPNAGFHATLARLSFERMKTHPKDPLPMMRW CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MIGHSEVIRCFGMSGKVYFFNDSGNIQKGVHDLPPKGLACFVKIKNMMMQAKPAEVSMVD CCCHHHHHHHCCCCCEEEEECCCCCHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHH ALVDPWLGAIGRDFEGYRNHCRRVFIFACTLAGAEGESREKIAIAAAFHDLGIWTDNTFD HHHHHHHHHHCCCCHHHHHHHHEEHHHEEEECCCCCCCCCEEEEEEEHHHCCCCCCCCHH YLEPSKRLASAYLASTSKAEWTDEIKAMIEQHHKVTPWSCKPGWLVEPFRKADWIDVTLG HCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEC ARNFELNRSYIREIQRRYPNAGFHATLARLSFERMKTHPKDPLPMMRW CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA