Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21674220

Identifier: 21674220

GI number: 21674220

Start: 1312677

End: 1313645

Strand: Reverse

Name: 21674220

Synonym: CT1399

Alternate gene names: NA

Gene position: 1313645-1312677 (Counterclockwise)

Preceding gene: 21674221

Following gene: 21674217

Centisome position: 60.96

GC content: 45.3

Gene sequence:

>969_bases
ATGGCCGTTTACTCTTTTCTTGACCTTGCCTATGATGTTCTCAAAGTGGCAACCCAGCCTTTGACTTATCAGGAGGTTTG
GCAGGCCGGAAAGGAGAATGGCCTTACAGACAAAATCAAGACATCAGGTAAGACTCCGTGGCAGAGTCTTGGGGCGCAAC
TGTATGTTGAAGTTCGAGACAACGAAGACTCCCGATTCATGAAAGTCGGGAAAAGACCTGCCCGCTTTTTTCTCAAAGAT
CGGGCGGCTGAATTAGCATCGGATGCAGTTGCCAAGATTGAGAAAGAGGAATCTAAGAAGAAGGAAAAGAAGACAGCGTA
TCACGAACGTGATATTCATCCACTGCTTACTTACTTCGCTTATGCAAATCCGAGTTTTAACCGTGGGCGCTCGATCTTTA
CAAAGACCATCTTTCATGAAAGATCGCAGAGATCCGGTTACAATGAGTGGATTCATCCAGATATTGTTGGATTCTATCTG
CCTTTGGACGACTGGCGTCCTGATGTAATTGAATTCAACCGCCTTTCTGACAACAACTCTCTGAAGCTTTTCTCGTTTGA
GGTGAAAAAGAGCCTTACGAAGGCTAACTACAGAGAGGCATACTTCCAGGCTGTATCTAACTCGTCGTGGGCACATGAAG
GCTATCTTGTCGCTGCTGAGATACTCCAAGATGATGAGTTTCTCGCTGAACTTGAACGACTTGCTTCATCGTTCGGAATC
GGCATCATTCATCTTGATCCGATAGACATCGACAGCTCCAGTATCCTCTATCCAGCAAGGGTTCGGGATATTCTTGACTG
GGAAACGATAAACAAGCTCTGCGAACAAAACACGGATTTCGAGAAATTTCTTCAGGACGTGAAAATAGACTTCGAGTCCA
AACGGATTCACCGGGCAGAGTTTGATGAGATCGTCAAAGACATTCGAAAGTATATCAGAGAGAAACTGAAGATTGAACCA
GAGGCTTGA

Upstream 100 bases:

>100_bases
GAAATGGAGTTTAAAATCGATATAAAATGGTGTTTTGGCTTACCTGTTTTTGATCGATATATTTTTTGCACAACGATAAG
CTTAACGATGGAGGCGAGAT

Downstream 100 bases:

>100_bases
CCGTATGCTGTAACCCGCACTGAAAGATTCGGCATGAGCTTTCAGCGCGATTTACTTTCATTTCTACCCGCTAATTCTCC
CAAACAACTCATACGCCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Excinuclease ATPase Subunit

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MAVYSFLDLAYDVLKVATQPLTYQEVWQAGKENGLTDKIKTSGKTPWQSLGAQLYVEVRDNEDSRFMKVGKRPARFFLKD
RAAELASDAVAKIEKEESKKKEKKTAYHERDIHPLLTYFAYANPSFNRGRSIFTKTIFHERSQRSGYNEWIHPDIVGFYL
PLDDWRPDVIEFNRLSDNNSLKLFSFEVKKSLTKANYREAYFQAVSNSSWAHEGYLVAAEILQDDEFLAELERLASSFGI
GIIHLDPIDIDSSSILYPARVRDILDWETINKLCEQNTDFEKFLQDVKIDFESKRIHRAEFDEIVKDIRKYIREKLKIEP
EA

Sequences:

>Translated_322_residues
MAVYSFLDLAYDVLKVATQPLTYQEVWQAGKENGLTDKIKTSGKTPWQSLGAQLYVEVRDNEDSRFMKVGKRPARFFLKD
RAAELASDAVAKIEKEESKKKEKKTAYHERDIHPLLTYFAYANPSFNRGRSIFTKTIFHERSQRSGYNEWIHPDIVGFYL
PLDDWRPDVIEFNRLSDNNSLKLFSFEVKKSLTKANYREAYFQAVSNSSWAHEGYLVAAEILQDDEFLAELERLASSFGI
GIIHLDPIDIDSSSILYPARVRDILDWETINKLCEQNTDFEKFLQDVKIDFESKRIHRAEFDEIVKDIRKYIREKLKIEP
EA
>Mature_321_residues
AVYSFLDLAYDVLKVATQPLTYQEVWQAGKENGLTDKIKTSGKTPWQSLGAQLYVEVRDNEDSRFMKVGKRPARFFLKDR
AAELASDAVAKIEKEESKKKEKKTAYHERDIHPLLTYFAYANPSFNRGRSIFTKTIFHERSQRSGYNEWIHPDIVGFYLP
LDDWRPDVIEFNRLSDNNSLKLFSFEVKKSLTKANYREAYFQAVSNSSWAHEGYLVAAEILQDDEFLAELERLASSFGIG
IIHLDPIDIDSSSILYPARVRDILDWETINKLCEQNTDFEKFLQDVKIDFESKRIHRAEFDEIVKDIRKYIREKLKIEPE
A

Specific function: Unknown

COG id: COG2958

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37573; Mature: 37442

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVYSFLDLAYDVLKVATQPLTYQEVWQAGKENGLTDKIKTSGKTPWQSLGAQLYVEVRD
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHCCCCCCHHHCCCEEEEEEEC
NEDSRFMKVGKRPARFFLKDRAAELASDAVAKIEKEESKKKEKKTAYHERDIHPLLTYFA
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
YANPSFNRGRSIFTKTIFHERSQRSGYNEWIHPDIVGFYLPLDDWRPDVIEFNRLSDNNS
HCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCC
LKLFSFEVKKSLTKANYREAYFQAVSNSSWAHEGYLVAAEILQDDEFLAELERLASSFGI
EEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHCCHHHHHHHHHHHHHHCE
GIIHLDPIDIDSSSILYPARVRDILDWETINKLCEQNTDFEKFLQDVKIDFESKRIHRAE
EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHH
FDEIVKDIRKYIREKLKIEPEA
HHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AVYSFLDLAYDVLKVATQPLTYQEVWQAGKENGLTDKIKTSGKTPWQSLGAQLYVEVRD
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHCCCCCCHHHCCCEEEEEEEC
NEDSRFMKVGKRPARFFLKDRAAELASDAVAKIEKEESKKKEKKTAYHERDIHPLLTYFA
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
YANPSFNRGRSIFTKTIFHERSQRSGYNEWIHPDIVGFYLPLDDWRPDVIEFNRLSDNNS
HCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCC
LKLFSFEVKKSLTKANYREAYFQAVSNSSWAHEGYLVAAEILQDDEFLAELERLASSFGI
EEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHCCHHHHHHHHHHHHHHCE
GIIHLDPIDIDSSSILYPARVRDILDWETINKLCEQNTDFEKFLQDVKIDFESKRIHRAE
EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHH
FDEIVKDIRKYIREKLKIEPEA
HHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA