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The map label for this gene is 21674205

Identifier: 21674205

GI number: 21674205

Start: 1298050

End: 1298463

Strand: Reverse

Name: 21674205

Synonym: CT1383

Alternate gene names: NA

Gene position: 1298463-1298050 (Counterclockwise)

Preceding gene: 21674206

Following gene: 21674204

Centisome position: 60.26

GC content: 57.0

Gene sequence:

>414_bases
ATGCCGCTGCAAATCTTCAACACCACGAAACGCACGATTGACGAAACACTCCTCGCCGAAGTCATCCGGCTGGTAATTGG
CGAAGAGGGCGGTGCGGTCGGCTCCATCGAGGCGATCTACTGCGGCAACAAGATGATCCGCCGCATCAATCGCGACTTCC
TCGGTCACGACTACGTCACCGACACCATCACCTTCGGCTACAACGAAGGTGGGGAAGTCGATGGTGAATTCTACATCTCG
CTCGATGTGATCGAGTCCAACGCCCGCCGGTTTGGCGTAAGCTTCGAGGACGAACTGCTGCGCGTGACGATCCACTCCGC
ACTGCACCTCATGGGCTACGACGACGAAACTAGTGAACTGCGAGCAGCGATGAGCCTTCGGGAGGATCACTATCTTTATC
GCCTCAGGCACTGA

Upstream 100 bases:

>100_bases
AAGAAGCACGTTGATGAAGATGTGCTGCTCACCATTCGCGTGCACCGCAACAACCTCAAGCAGATCGACGCCATGCTCAA
GGCGTCGGCATCGAAAAACC

Downstream 100 bases:

>100_bases
TATTTCCCTGTCGTTCGACACCTGATCGTTGTATCGGGGATAGAATTTTTTACTAAATTATCCTCATAAAATCCCCGCAT
TTAGTTCCCTGCGCCGTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MPLQIFNTTKRTIDETLLAEVIRLVIGEEGGAVGSIEAIYCGNKMIRRINRDFLGHDYVTDTITFGYNEGGEVDGEFYIS
LDVIESNARRFGVSFEDELLRVTIHSALHLMGYDDETSELRAAMSLREDHYLYRLRH

Sequences:

>Translated_137_residues
MPLQIFNTTKRTIDETLLAEVIRLVIGEEGGAVGSIEAIYCGNKMIRRINRDFLGHDYVTDTITFGYNEGGEVDGEFYIS
LDVIESNARRFGVSFEDELLRVTIHSALHLMGYDDETSELRAAMSLREDHYLYRLRH
>Mature_136_residues
PLQIFNTTKRTIDETLLAEVIRLVIGEEGGAVGSIEAIYCGNKMIRRINRDFLGHDYVTDTITFGYNEGGEVDGEFYISL
DVIESNARRFGVSFEDELLRVTIHSALHLMGYDDETSELRAAMSLREDHYLYRLRH

Specific function: Involved in rRNA and/or ribosome maturation and assembly. Required for normal 5' and 3' processing of 16S, 23S and 5S rRNAs. May have metal-dependent hydrolase activity

COG id: COG0319

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rRNA maturation factor YbeY family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RRMF_CHLTE (Q8KCN1)

Other databases:

- EMBL:   AE006470
- RefSeq:   NP_662270.1
- ProteinModelPortal:   Q8KCN1
- GeneID:   1006773
- GenomeReviews:   AE006470_GR
- KEGG:   cte:CT1383
- NMPDR:   fig|194439.1.peg.1364
- TIGR:   CT1383
- HOGENOM:   HBG734136
- OMA:   LMEEDVY
- ProtClustDB:   CLSK637735
- BioCyc:   CTEP194439:CT_1383-MONOMER
- HAMAP:   MF_00009
- InterPro:   IPR023091
- InterPro:   IPR020549
- InterPro:   IPR002036
- Gene3D:   G3DSA:3.40.390.30
- TIGRFAMs:   TIGR00043

Pfam domain/function: PF02130 UPF0054

EC number: NA

Molecular weight: Translated: 15679; Mature: 15548

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS01306 UPF0054

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLQIFNTTKRTIDETLLAEVIRLVIGEEGGAVGSIEAIYCGNKMIRRINRDFLGHDYVT
CCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCEE
DTITFGYNEGGEVDGEFYISLDVIESNARRFGVSFEDELLRVTIHSALHLMGYDDETSEL
EEEEECCCCCCCCCCEEEEEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHH
RAAMSLREDHYLYRLRH
HHHHHHHCCCEEEEECC
>Mature Secondary Structure 
PLQIFNTTKRTIDETLLAEVIRLVIGEEGGAVGSIEAIYCGNKMIRRINRDFLGHDYVT
CEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCEE
DTITFGYNEGGEVDGEFYISLDVIESNARRFGVSFEDELLRVTIHSALHLMGYDDETSEL
EEEEECCCCCCCCCCEEEEEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHH
RAAMSLREDHYLYRLRH
HHHHHHHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901