| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674178
Identifier: 21674178
GI number: 21674178
Start: 1273916
End: 1274839
Strand: Direct
Name: 21674178
Synonym: CT1356
Alternate gene names: NA
Gene position: 1273916-1274839 (Clockwise)
Preceding gene: 21674176
Following gene: 21674179
Centisome position: 59.12
GC content: 45.02
Gene sequence:
>924_bases ATGACACAGCAAACAAACCATCACTCGGGAACAGCGAATGGCTCCCGCTGTGTTGTTCTCGACACAGCATCTTATTGTCT GCTCCTCAAAGGTGACAGCCCTCCTTTTTCTGCCGAAGAGCGGTCGTTGCTCATAGCCGAATCGCCCGAAGAAGCATGCG ATTTCCAGTGTCTTCTTGGTGACGCTTGCCAACCATTCCTTTCCCAGGAATATCGCCGTATTCATCCGGGTCTCTACGAA AAACTCGAGGCCATTGCTATATCAGGTTGGAACAATGATGCGCCATTCGGTATTGACACGGCTGCGCACCTCATGAAAAA ACTGCCGCTTGACCTGAACTGTCTTATCAACAGTCCAATTGCCCTCAGCCCGAATGACCCGCTACCAGCTCTTATTCAGA AAAATCTGGTTCACAAACATGTCGAAGCGAATGTTCTTGTTTCAGAACCTTTTACAGCTGGCAGGCTGCGTTACTTCAAT ATATTTTCAGAAACAGCGGAGCTGAAATTCGATCATCAGTCACCTCATGTTCAAGGACTACTTATTCTCGAGGCATTGAG ACAGGCTGGAATTGCAAGCGCTCACTATCAAGGATTGCCACTTGACGGAAAACTTGCCCTGCTAAATTACAACACGAGTT TCTACCATTTTCTTGAACAGGAATCTCCTATAATATGCAGGTGTTACACTGATTTTACATCAAGCAAAACAAGTGACGAT GCGGAAGCCTGTATCTATATGCAGGTCTTTCAATGGGGCAGGCTATGTGCGGATGCCATTCTGAAAGGATTCGCTTGCAC CAATGCTGAACGTTATGAGCAAAAAGAGCAACGTTTGAAAAAAATTATAGAAAGACATAAGACCAATTTTGATTCGAAGC TCAAAAGAATGTATGAATCAATGGTATCAACGCAATGCATGTAG
Upstream 100 bases:
>100_bases AATTCTGGACAACCATGATGGACAAAAGCAGAAATTGAACTTGTTCATATAACGCTCGGCCATCATAACCATTGAAAAAG CTTTTTTCATGAGCGCCAGT
Downstream 100 bases:
>100_bases CAATCATTGGGGGCGGAATATCAGGTATTGCTGCTGCATTCTACCTTGCGCAGCAAAAAGTCAGCATTGATATTTTTGAA TCAGAAAACCAAATTGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MTQQTNHHSGTANGSRCVVLDTASYCLLLKGDSPPFSAEERSLLIAESPEEACDFQCLLGDACQPFLSQEYRRIHPGLYE KLEAIAISGWNNDAPFGIDTAAHLMKKLPLDLNCLINSPIALSPNDPLPALIQKNLVHKHVEANVLVSEPFTAGRLRYFN IFSETAELKFDHQSPHVQGLLILEALRQAGIASAHYQGLPLDGKLALLNYNTSFYHFLEQESPIICRCYTDFTSSKTSDD AEACIYMQVFQWGRLCADAILKGFACTNAERYEQKEQRLKKIIERHKTNFDSKLKRMYESMVSTQCM
Sequences:
>Translated_307_residues MTQQTNHHSGTANGSRCVVLDTASYCLLLKGDSPPFSAEERSLLIAESPEEACDFQCLLGDACQPFLSQEYRRIHPGLYE KLEAIAISGWNNDAPFGIDTAAHLMKKLPLDLNCLINSPIALSPNDPLPALIQKNLVHKHVEANVLVSEPFTAGRLRYFN IFSETAELKFDHQSPHVQGLLILEALRQAGIASAHYQGLPLDGKLALLNYNTSFYHFLEQESPIICRCYTDFTSSKTSDD AEACIYMQVFQWGRLCADAILKGFACTNAERYEQKEQRLKKIIERHKTNFDSKLKRMYESMVSTQCM >Mature_306_residues TQQTNHHSGTANGSRCVVLDTASYCLLLKGDSPPFSAEERSLLIAESPEEACDFQCLLGDACQPFLSQEYRRIHPGLYEK LEAIAISGWNNDAPFGIDTAAHLMKKLPLDLNCLINSPIALSPNDPLPALIQKNLVHKHVEANVLVSEPFTAGRLRYFNI FSETAELKFDHQSPHVQGLLILEALRQAGIASAHYQGLPLDGKLALLNYNTSFYHFLEQESPIICRCYTDFTSSKTSDDA EACIYMQVFQWGRLCADAILKGFACTNAERYEQKEQRLKKIIERHKTNFDSKLKRMYESMVSTQCM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34542; Mature: 34411
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQQTNHHSGTANGSRCVVLDTASYCLLLKGDSPPFSAEERSLLIAESPEEACDFQCLLG CCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEECCCHHHHCHHHHHH DACQPFLSQEYRRIHPGLYEKLEAIAISGWNNDAPFGIDTAAHLMKKLPLDLNCLINSPI HHCCHHHHHHHHHHCCHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEECCCE ALSPNDPLPALIQKNLVHKHVEANVLVSEPFTAGRLRYFNIFSETAELKFDHQSPHVQGL EECCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEHHHHHHEEECCCCCCHHHH LILEALRQAGIASAHYQGLPLDGKLALLNYNTSFYHFLEQESPIICRCYTDFTSSKTSDD HHHHHHHHCCCCHHCCCCCCCCCEEEEEECCCHHHHHHCCCCCEEEEEECCCCCCCCCCC AEACIYMQVFQWGRLCADAILKGFACTNAERYEQKEQRLKKIIERHKTNFDSKLKRMYES HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH MVSTQCM HHHHCCC >Mature Secondary Structure TQQTNHHSGTANGSRCVVLDTASYCLLLKGDSPPFSAEERSLLIAESPEEACDFQCLLG CCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEECCCHHHHCHHHHHH DACQPFLSQEYRRIHPGLYEKLEAIAISGWNNDAPFGIDTAAHLMKKLPLDLNCLINSPI HHCCHHHHHHHHHHCCHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEECCCE ALSPNDPLPALIQKNLVHKHVEANVLVSEPFTAGRLRYFNIFSETAELKFDHQSPHVQGL EECCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEHHHHHHEEECCCCCCHHHH LILEALRQAGIASAHYQGLPLDGKLALLNYNTSFYHFLEQESPIICRCYTDFTSSKTSDD HHHHHHHHCCCCHHCCCCCCCCCEEEEEECCCHHHHHHCCCCCEEEEEECCCCCCCCCCC AEACIYMQVFQWGRLCADAILKGFACTNAERYEQKEQRLKKIIERHKTNFDSKLKRMYES HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH MVSTQCM HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA