| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674179
Identifier: 21674179
GI number: 21674179
Start: 1274830
End: 1276143
Strand: Direct
Name: 21674179
Synonym: CT1357
Alternate gene names: NA
Gene position: 1274830-1276143 (Clockwise)
Preceding gene: 21674178
Following gene: 21674180
Centisome position: 59.16
GC content: 47.56
Gene sequence:
>1314_bases ATGCATGTAGCAATCATTGGGGGCGGAATATCAGGTATTGCTGCTGCATTCTACCTTGCGCAGCAAAAAGTCAGCATTGA TATTTTTGAATCAGAAAACCAAATTGGCGGCAGAGCTGGCAGCGATTTTTTGCAGGAACGCAGGGTAGATTTTGGTGGCA AGAATATTGGTCGCAATTATTTGCTTTTTCGCGAATTCGCCAGAGCATACGGAGATCCTGCATTTGAGTATTTTGGTATA AACACGTCACAGCTTATCAACGGACGCATCGTCTCCATCAGTCGGGAAGGCTCCGCATGGCTCAATCTCCTTAAAATCAT CCGCCTTTGCGGCCTCAGAAAAGGAATAACCCGTCTCTACCCTCACATCCAGGCGATTTTGAATGATCGTAGTCAGGGGG TTCTGTGCAGTGACTATTTCCGAGCACTGAGCGAGAACTTTGATCATCTCACACTTGACCGGTATCTGAACCAGCGTTGT ATCGACAGGGTGATAAGACCAATAACAATCCGGATGAATGGAGCCGAGCCTGAGGAGTGTTATCCTGGAAATTTCGGTTC GAACCTAGCCCTTGCCCTCGACAGTTTCGAACAACTCACCTTAGGAATGTATAATCTGCTCGATACATTCATTGCCAGTC ACAGACAGGAGTCATCTTTCAGGATATTGACCGGCCACAGAGTCACGTCGATAGCGAAAGATCAGGACAAATTTCGCATA AACTATCTGAATGGCGCGGTATCAGGCACCGGAAGTTATGACAGGATCATTTCAGCCCTGCCCGCTTATAGTCTGGCCGA ATTGCTCCAGGATGAGCTGCCTGAAGCCTCCAGACTGCTCAATAAGATCAGCTATTTCCCGGTCAGCATAGCGATCGTAA AATATCGTGACGAGGTCTTTCCCCAAAACCGTCGCGCAATGGTTTTCGACCGCAATTCCCCACTGAGCAACGCAGGGGCC TATGGTCTTAATGATCTGGATATTGTCAGATATACCTTCAGCGGTAAAGCCTCAAGAGCCGCGATCTCTGAACATTCCAC CCCTGAAGAAGTAATAAGTCTTGGTGAAAAGACTGCATCTCCTTACTTTAGCATAAAAGACAATCCAAAAGAGGCCTTTG TATTCAGATATTTTCCAAAGGGTTTATGCGCATATTCTCCCAAGCACCACCTGCTTCTCGAAGAAATAGACCGGCTGGTA AACCGTCTATCCGGTTTCGGAACCACTGGTGACTATCGCCGGGGGGCCTCGATCGAGGCCTGCTTCAGAGCAGCCAAAGA GTGTATTGAAAAAGTAGTTGGAGATGGTTCTTGA
Upstream 100 bases:
>100_bases ATGAGCAAAAAGAGCAACGTTTGAAAAAAATTATAGAAAGACATAAGACCAATTTTGATTCGAAGCTCAAAAGAATGTAT GAATCAATGGTATCAACGCA
Downstream 100 bases:
>100_bases AAAAACTCATTGAGCAGTTAACTGAATACCTAAGGGAAGGAACGTTAGTTTCCCGTTCAGACGCTATGGTGTCAGGCATA CTGGGAGCACTCGCTAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MHVAIIGGGISGIAAAFYLAQQKVSIDIFESENQIGGRAGSDFLQERRVDFGGKNIGRNYLLFREFARAYGDPAFEYFGI NTSQLINGRIVSISREGSAWLNLLKIIRLCGLRKGITRLYPHIQAILNDRSQGVLCSDYFRALSENFDHLTLDRYLNQRC IDRVIRPITIRMNGAEPEECYPGNFGSNLALALDSFEQLTLGMYNLLDTFIASHRQESSFRILTGHRVTSIAKDQDKFRI NYLNGAVSGTGSYDRIISALPAYSLAELLQDELPEASRLLNKISYFPVSIAIVKYRDEVFPQNRRAMVFDRNSPLSNAGA YGLNDLDIVRYTFSGKASRAAISEHSTPEEVISLGEKTASPYFSIKDNPKEAFVFRYFPKGLCAYSPKHHLLLEEIDRLV NRLSGFGTTGDYRRGASIEACFRAAKECIEKVVGDGS
Sequences:
>Translated_437_residues MHVAIIGGGISGIAAAFYLAQQKVSIDIFESENQIGGRAGSDFLQERRVDFGGKNIGRNYLLFREFARAYGDPAFEYFGI NTSQLINGRIVSISREGSAWLNLLKIIRLCGLRKGITRLYPHIQAILNDRSQGVLCSDYFRALSENFDHLTLDRYLNQRC IDRVIRPITIRMNGAEPEECYPGNFGSNLALALDSFEQLTLGMYNLLDTFIASHRQESSFRILTGHRVTSIAKDQDKFRI NYLNGAVSGTGSYDRIISALPAYSLAELLQDELPEASRLLNKISYFPVSIAIVKYRDEVFPQNRRAMVFDRNSPLSNAGA YGLNDLDIVRYTFSGKASRAAISEHSTPEEVISLGEKTASPYFSIKDNPKEAFVFRYFPKGLCAYSPKHHLLLEEIDRLV NRLSGFGTTGDYRRGASIEACFRAAKECIEKVVGDGS >Mature_437_residues MHVAIIGGGISGIAAAFYLAQQKVSIDIFESENQIGGRAGSDFLQERRVDFGGKNIGRNYLLFREFARAYGDPAFEYFGI NTSQLINGRIVSISREGSAWLNLLKIIRLCGLRKGITRLYPHIQAILNDRSQGVLCSDYFRALSENFDHLTLDRYLNQRC IDRVIRPITIRMNGAEPEECYPGNFGSNLALALDSFEQLTLGMYNLLDTFIASHRQESSFRILTGHRVTSIAKDQDKFRI NYLNGAVSGTGSYDRIISALPAYSLAELLQDELPEASRLLNKISYFPVSIAIVKYRDEVFPQNRRAMVFDRNSPLSNAGA YGLNDLDIVRYTFSGKASRAAISEHSTPEEVISLGEKTASPYFSIKDNPKEAFVFRYFPKGLCAYSPKHHLLLEEIDRLV NRLSGFGTTGDYRRGASIEACFRAAKECIEKVVGDGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48889; Mature: 48889
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVAIIGGGISGIAAAFYLAQQKVSIDIFESENQIGGRAGSDFLQERRVDFGGKNIGRNY CEEEEEECCHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCHH LLFREFARAYGDPAFEYFGINTSQLINGRIVSISREGSAWLNLLKIIRLCGLRKGITRLY HHHHHHHHHHCCCCCEEECCCHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHH PHIQAILNDRSQGVLCSDYFRALSENFDHLTLDRYLNQRCIDRVIRPITIRMNGAEPEEC HHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCC YPGNFGSNLALALDSFEQLTLGMYNLLDTFIASHRQESSFRILTGHRVTSIAKDQDKFRI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHCCCCCEEE NYLNGAVSGTGSYDRIISALPAYSLAELLQDELPEASRLLNKISYFPVSIAIVKYRDEVF EEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEEHHHHC PQNRRAMVFDRNSPLSNAGAYGLNDLDIVRYTFSGKASRAAISEHSTPEEVISLGEKTAS CCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCCHHHHHHHHHHCCC PYFSIKDNPKEAFVFRYFPKGLCAYSPKHHLLLEEIDRLVNRLSGFGTTGDYRRGASIEA CCEEECCCCCCEEEEEECCCCHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH CFRAAKECIEKVVGDGS HHHHHHHHHHHHHCCCC >Mature Secondary Structure MHVAIIGGGISGIAAAFYLAQQKVSIDIFESENQIGGRAGSDFLQERRVDFGGKNIGRNY CEEEEEECCHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCHH LLFREFARAYGDPAFEYFGINTSQLINGRIVSISREGSAWLNLLKIIRLCGLRKGITRLY HHHHHHHHHHCCCCCEEECCCHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHH PHIQAILNDRSQGVLCSDYFRALSENFDHLTLDRYLNQRCIDRVIRPITIRMNGAEPEEC HHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCC YPGNFGSNLALALDSFEQLTLGMYNLLDTFIASHRQESSFRILTGHRVTSIAKDQDKFRI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHCCCCCEEE NYLNGAVSGTGSYDRIISALPAYSLAELLQDELPEASRLLNKISYFPVSIAIVKYRDEVF EEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEEHHHHC PQNRRAMVFDRNSPLSNAGAYGLNDLDIVRYTFSGKASRAAISEHSTPEEVISLGEKTAS CCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCCHHHHHHHHHHCCC PYFSIKDNPKEAFVFRYFPKGLCAYSPKHHLLLEEIDRLVNRLSGFGTTGDYRRGASIEA CCEEECCCCCCEEEEEECCCCHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH CFRAAKECIEKVVGDGS HHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA