| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is macA [H]
Identifier: 21674170
GI number: 21674170
Start: 1266553
End: 1267821
Strand: Direct
Name: macA [H]
Synonym: CT1348
Alternate gene names: 21674170
Gene position: 1266553-1267821 (Clockwise)
Preceding gene: 21674169
Following gene: 21674171
Centisome position: 58.77
GC content: 57.37
Gene sequence:
>1269_bases ATGGCTAACACCAAACGCTCCGGAAAACTCCGCAACATCTTCATCATCGGCGGCGCGCTCTTCGCCATCGGAGTCGCAGC GCTCATCTGGCTGAACACGCGCGAAAAAGCGGTCGAGGTGACCACCGAAAAGGTGTTCCGCAAGGAGGTGGTGCACACCG TTACTGCAACCGGCAAGATTCAGCCTGAAACCGAAGTAGCCATGTCTCCCGACGTCTCCGGCGAGATCATCGAGCTGCCG GTCGTGGAGGGGCAGGAGGTGAAAGCCGGGCAACTGCTCTTCCGGATCCAGCCCGACATCTACGTCAACCAGGTCAAGCA GAGCCGGGCGCAGCTCAATCTGTCGAAGGCGCAAAGCATGGAGGCCAAAGCACGGATGCTTAAGGCGGAGGACGATTTTC GCAAAGCAGACATTTTGTATAAAGACAAGCTCATTTCCCAAACCGACTGGCTCTCGGCGAAAACCAACGCCGAAACGAGC CGTGCAGCCTGGAAAGCAGCCCGATATTCCATCGACCAGAACCAGAGCCTGCTCGACCAGAACGAAGAGCGCCTTACCAA AACCGTGGTGCGTTCGCCCATCAACGGCACGATCATTTCGCTAAGTAGCAAACCAGGCGAGCGCGTTGTCGGCACCGGCC AGTTCCCCGGCACCGAGGTGCTCAAGATCGCCAATCTGGACAACATGCTGCTCAAGGTCGAGGTGAACGAGAACGACATC GTGAACGTGCAGGTCGGCAACCCAGTCACCGTAACGGTCGATGCGTTCGGCGACCGCACCTTCAAAGGTGAGGTGAGCGA AATCGCCAATTCTGCCAAAACTCAGGCCGCGAACACGCAGGAGGAGGCAACCAACTTCGAGGTCAAGATCAAAATCCTCA ACCACCAGCGCCTGCTCAAACCCGGCATGAGCGGCACGGCAAATATCGAAACCCAGCGAGTGCCGAACGCGCTGGTAGTG CCGATCCAGAGCGTCACCATGCGAACGGCGGGCGGCAAAAAAGCGGCAACGCCAACCGATTCCACAAGCAACAACAAGGT CGTGCAGCTCAACCAGAATCATCGCCTTACCGATGAAACCGAAGGCGTGTTCGTCGTCGAAGGCGACCATGTGCGCTTCA GAAAGGTCAAAACCGGCACGACCGACAACACCCATATTATTATCCTCGAAGGAGTGAAAGAGGGCGAAGAGGTCGTGTCG GGCAGTTACGGCGCCATCAGCCGCGAATTGCAGGACGGTAGCACCGTGAAGCTTCAGAAGAAACGATGA
Upstream 100 bases:
>100_bases GACGCAGGCGATTTACAACCTCGCGCTGCAAAAGGCGCTGCTCGATTACACCAGTGGCGTCGGCATCGAAGAGGTCAGCA ACGCATCATCTCACTGATTT
Downstream 100 bases:
>100_bases GCAAGCAGCCGTACATCATCCGGATCAGCAACCTCTGCCGGTATTACACCATGGGCGACCAGACGGTCAAGGCGCTCGAC GACATTAACCTCGATTTTCG
Product: membrane fusion efflux protein, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MANTKRSGKLRNIFIIGGALFAIGVAALIWLNTREKAVEVTTEKVFRKEVVHTVTATGKIQPETEVAMSPDVSGEIIELP VVEGQEVKAGQLLFRIQPDIYVNQVKQSRAQLNLSKAQSMEAKARMLKAEDDFRKADILYKDKLISQTDWLSAKTNAETS RAAWKAARYSIDQNQSLLDQNEERLTKTVVRSPINGTIISLSSKPGERVVGTGQFPGTEVLKIANLDNMLLKVEVNENDI VNVQVGNPVTVTVDAFGDRTFKGEVSEIANSAKTQAANTQEEATNFEVKIKILNHQRLLKPGMSGTANIETQRVPNALVV PIQSVTMRTAGGKKAATPTDSTSNNKVVQLNQNHRLTDETEGVFVVEGDHVRFRKVKTGTTDNTHIIILEGVKEGEEVVS GSYGAISRELQDGSTVKLQKKR
Sequences:
>Translated_422_residues MANTKRSGKLRNIFIIGGALFAIGVAALIWLNTREKAVEVTTEKVFRKEVVHTVTATGKIQPETEVAMSPDVSGEIIELP VVEGQEVKAGQLLFRIQPDIYVNQVKQSRAQLNLSKAQSMEAKARMLKAEDDFRKADILYKDKLISQTDWLSAKTNAETS RAAWKAARYSIDQNQSLLDQNEERLTKTVVRSPINGTIISLSSKPGERVVGTGQFPGTEVLKIANLDNMLLKVEVNENDI VNVQVGNPVTVTVDAFGDRTFKGEVSEIANSAKTQAANTQEEATNFEVKIKILNHQRLLKPGMSGTANIETQRVPNALVV PIQSVTMRTAGGKKAATPTDSTSNNKVVQLNQNHRLTDETEGVFVVEGDHVRFRKVKTGTTDNTHIIILEGVKEGEEVVS GSYGAISRELQDGSTVKLQKKR >Mature_421_residues ANTKRSGKLRNIFIIGGALFAIGVAALIWLNTREKAVEVTTEKVFRKEVVHTVTATGKIQPETEVAMSPDVSGEIIELPV VEGQEVKAGQLLFRIQPDIYVNQVKQSRAQLNLSKAQSMEAKARMLKAEDDFRKADILYKDKLISQTDWLSAKTNAETSR AAWKAARYSIDQNQSLLDQNEERLTKTVVRSPINGTIISLSSKPGERVVGTGQFPGTEVLKIANLDNMLLKVEVNENDIV NVQVGNPVTVTVDAFGDRTFKGEVSEIANSAKTQAANTQEEATNFEVKIKILNHQRLLKPGMSGTANIETQRVPNALVVP IQSVTMRTAGGKKAATPTDSTSNNKVVQLNQNHRLTDETEGVFVVEGDHVRFRKVKTGTTDNTHIIILEGVKEGEEVVSG SYGAISRELQDGSTVKLQKKR
Specific function: Efflux transporter for macrolide antibiotics [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI87081796, Length=352, Percent_Identity=25.2840909090909, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1790519, Length=301, Percent_Identity=24.5847176079734, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI87081951, Length=222, Percent_Identity=27.9279279279279, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 46301; Mature: 46170
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANTKRSGKLRNIFIIGGALFAIGVAALIWLNTREKAVEVTTEKVFRKEVVHTVTATGKI CCCCCCCCCEEEEEEECHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHEECCCC QPETEVAMSPDVSGEIIELPVVEGQEVKAGQLLFRIQPDIYVNQVKQSRAQLNLSKAQSM CCCCCEEECCCCCCCEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHH EAKARMLKAEDDFRKADILYKDKLISQTDWLSAKTNAETSRAAWKAARYSIDQNQSLLDQ HHHHHHHHCCCCCHHHCEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHCC NEERLTKTVVRSPINGTIISLSSKPGERVVGTGQFPGTEVLKIANLDNMLLKVEVNENDI CHHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCCCCCCEEEEECCCCEEEEEEECCCCE VNVQVGNPVTVTVDAFGDRTFKGEVSEIANSAKTQAANTQEEATNFEVKIKILNHQRLLK EEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCEEEEEEEECCHHHHC PGMSGTANIETQRVPNALVVPIQSVTMRTAGGKKAATPTDSTSNNKVVQLNQNHRLTDET CCCCCCCCEECCCCCCEEEEEEEHEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCC EGVFVVEGDHVRFRKVKTGTTDNTHIIILEGVKEGEEVVSGSYGAISRELQDGSTVKLQK CCEEEEECCCEEEEEEECCCCCCEEEEEEECCCCCHHHHCCCCHHHHHHCCCCCEEEEEE KR CC >Mature Secondary Structure ANTKRSGKLRNIFIIGGALFAIGVAALIWLNTREKAVEVTTEKVFRKEVVHTVTATGKI CCCCCCCCEEEEEEECHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHEECCCC QPETEVAMSPDVSGEIIELPVVEGQEVKAGQLLFRIQPDIYVNQVKQSRAQLNLSKAQSM CCCCCEEECCCCCCCEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHH EAKARMLKAEDDFRKADILYKDKLISQTDWLSAKTNAETSRAAWKAARYSIDQNQSLLDQ HHHHHHHHCCCCCHHHCEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHCC NEERLTKTVVRSPINGTIISLSSKPGERVVGTGQFPGTEVLKIANLDNMLLKVEVNENDI CHHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCCCCCCEEEEECCCCEEEEEEECCCCE VNVQVGNPVTVTVDAFGDRTFKGEVSEIANSAKTQAANTQEEATNFEVKIKILNHQRLLK EEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCEEEEEEEECCHHHHC PGMSGTANIETQRVPNALVVPIQSVTMRTAGGKKAATPTDSTSNNKVVQLNQNHRLTDET CCCCCCCCEECCCCCCEEEEEEEHEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCC EGVFVVEGDHVRFRKVKTGTTDNTHIIILEGVKEGEEVVSGSYGAISRELQDGSTVKLQK CCEEEEECCCEEEEEEECCCCCCEEEEEEECCCCCHHHHCCCCHHHHHHCCCCCEEEEEE KR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]