| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674149
Identifier: 21674149
GI number: 21674149
Start: 1250195
End: 1250695
Strand: Reverse
Name: 21674149
Synonym: CT1327
Alternate gene names: NA
Gene position: 1250695-1250195 (Counterclockwise)
Preceding gene: 21674150
Following gene: 21674148
Centisome position: 58.04
GC content: 59.88
Gene sequence:
>501_bases ATGCCGACGACACACGAAAATCTGAAGAACGCCTTTGCCGGTGAAAGCCAGGCCTTCATGAAATACACCACCTTTGCCGA GAAGGCTGAAAAAGAGGGCTTCAAGAACGTGGCCAAGCTGTTCAGAACCACCGCGCAGGCCGAGCGCATCCACGCGCAGG GCCACCTTGCCGCGGACGACGCTATCGGCTCGACCGCTGAAAACCTCGAAACGGCCATCGGTGGCGAGACCTACGAGCAC AACGAAATGTATCCGCCGATGTTCGAGCAGGCCGTGGCCGAAGGTCACAAGGCCAAGCGCATGTTCGGTTTCGCCGTGGA AGCCGAGAAGGTTCACGCCGCGCTCTATCGCAAGGCGCTCGAAGCGGTCAAGGCTGGACAGGACCTGGCTGAAACTGAAA TCTGGCTCTGCCCGGTTTGCGGTCACATCGAGCTTGGCGCTCCGCCGGAGCACTGCCCGATCTGTAACGTCAAGGCGTCA GCCTACATCCAGATCGCCTGA
Upstream 100 bases:
>100_bases TGACCCACGAAGAGGATCTTCAGGCGCTCCTCGAAGACCTCGGAGTCTTCCTGCGGAAATGATTTTCAATTCACCATTCA TAACTCATAATTATTCACTT
Downstream 100 bases:
>100_bases TCGTTCGACTCACATCGAAAAATGTCAATGCTCTCCGTCGTGAAGCCGGGGGGCATTTTTTGTCCGGATCGGAATCATAA ACGGATGTTGTAGAAAAAAT
Product: rubrerythrin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MPTTHENLKNAFAGESQAFMKYTTFAEKAEKEGFKNVAKLFRTTAQAERIHAQGHLAADDAIGSTAENLETAIGGETYEH NEMYPPMFEQAVAEGHKAKRMFGFAVEAEKVHAALYRKALEAVKAGQDLAETEIWLCPVCGHIELGAPPEHCPICNVKAS AYIQIA
Sequences:
>Translated_166_residues MPTTHENLKNAFAGESQAFMKYTTFAEKAEKEGFKNVAKLFRTTAQAERIHAQGHLAADDAIGSTAENLETAIGGETYEH NEMYPPMFEQAVAEGHKAKRMFGFAVEAEKVHAALYRKALEAVKAGQDLAETEIWLCPVCGHIELGAPPEHCPICNVKAS AYIQIA >Mature_165_residues PTTHENLKNAFAGESQAFMKYTTFAEKAEKEGFKNVAKLFRTTAQAERIHAQGHLAADDAIGSTAENLETAIGGETYEHN EMYPPMFEQAVAEGHKAKRMFGFAVEAEKVHAALYRKALEAVKAGQDLAETEIWLCPVCGHIELGAPPEHCPICNVKASA YIQIA
Specific function: May provide oxidative stress protection via catalytic reduction of intracellular hydrogen peroxide [H]
COG id: COG1592
COG function: function code C; Rubrerythrin
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rubredoxin-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR004039 - InterPro: IPR003251 [H]
Pfam domain/function: PF02915 Rubrerythrin [H]
EC number: NA
Molecular weight: Translated: 18166; Mature: 18034
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTHENLKNAFAGESQAFMKYTTFAEKAEKEGFKNVAKLFRTTAQAERIHAQGHLAADD CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH AIGSTAENLETAIGGETYEHNEMYPPMFEQAVAEGHKAKRMFGFAVEAEKVHAALYRKAL HCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH EAVKAGQDLAETEIWLCPVCGHIELGAPPEHCPICNVKASAYIQIA HHHHCCCHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEC >Mature Secondary Structure PTTHENLKNAFAGESQAFMKYTTFAEKAEKEGFKNVAKLFRTTAQAERIHAQGHLAADD CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH AIGSTAENLETAIGGETYEHNEMYPPMFEQAVAEGHKAKRMFGFAVEAEKVHAALYRKAL HCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH EAVKAGQDLAETEIWLCPVCGHIELGAPPEHCPICNVKASAYIQIA HHHHCCCHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]