Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21674137

Identifier: 21674137

GI number: 21674137

Start: 1234338

End: 1235666

Strand: Direct

Name: 21674137

Synonym: CT1314

Alternate gene names: NA

Gene position: 1234338-1235666 (Clockwise)

Preceding gene: 21674136

Following gene: 21674138

Centisome position: 57.28

GC content: 53.05

Gene sequence:

>1329_bases
TTGCTGTCGGTTTTTGTTGTAAATTTACGTTCAAACTCAGCACCTTTCTCCTTCAGTCGGCTTCTCATGCATACCACCAT
TGTCAATGAAAGAAGTCTTCGTACCTGTAACTTCCCCATCACGTTGCAGGATATCAGGACGCTCAAGGAACTGTACCGGC
TCAAGGCCGAAACGAGAGACCTGAGAAAGCCGATCGTCCGGAACATCATGAAGCAGCGGGTCGTCGGCAAAGGATGCCTC
GAATCCCTGAAAAACGCCCTCTACTCCCTCGAAACCATTTACATCGACGACTATACAGGCCAAAGACTGCTTCGCATCGA
TGGCATGAAGCAGATCGAGGTTGACCTGACCTACGAAATCCGCGAGCTGCAAAAGGATATTTACTACCTCGAATACGGCG
AAGACCGCTTCATCGAGTACCTGGCGAAGTTCATTCCCGGCTTCACCGACTACGTCACCGAAGGGGTGGAGATGCTGCGA
GGCAAATCGTTCAACGCATTTATCACCGACCGCGACGGCACCACCAACAACTACTGCGGACGCTATCGCTCCTCGATCCA
GCCCATCTACAATTCGGTCTTCCTGTCGCGCTTCGCCAAAAACTGCTGCCGCTATCCGATGATCGTCACTTCGGCGCCGC
TCAAGGATTTCGGCATCCTGAACGTCTCGATCAATCCCGAACACATCTTCGTCTATGCCGGCTCCAAAGGACGCGAGTTC
ATCGACATCGACGGCCAGTTCCACAGCTTCCCGATTGAACCCGGCAAGCAGGAGCTGATCCGGCTGCTCAACGAACGAAT
GCAACTGCTGCTGCTCGATCCATCGTTCGAGAAGTTCAACTTCATCGGTTCAGCATTGCAGATGAAGTTCGGCCAGACCA
CCATTGCCCGCCAGGACATTACCCGCTCGGTCAACGAAGCTGAATCGGCAGCATTTCTTGAAAAAATCAAGGGCATCGTG
CGCGACATCGATCCTGAAGGCAAGAACTTCAGGATCGAGGATACCGGCCTCGACATCGAGATCATCCTGACCATCGACGT
CGATCCCAAAACGGGTATGATCCGCGATTTCGACAAGGGCGATGGACTCGAATTCATCTGCCGCAAGATGAATATCGACC
ATACCGGAGAACCGGTACTGGTCTGCGGCGACACCTCTTCGGACATCCCGATGCTGAAAAAGGCGATGGAGATGTACGAC
GATGTCTGGGCTATCTTTGTCACCCGGGATGAAAAGCTGATGCAGCGCGTCAGGGAAATCTGCCCAAAAAGCTATATGGT
GCCCTACCCCGACATCCTTTTGACCATCCTCGGATTGCTCTCGCTCTGA

Upstream 100 bases:

>100_bases
ACGCGCTCTGCACAAAAACCGCATAAAAAGAGCGCTCCGGAACCGTAAACAGCTTTAGCTTGTTCTCTGACTGACTGATA
TAGATGTTTATTTTACTGGA

Downstream 100 bases:

>100_bases
ACGTCACTTTCACCGATAATCCTCTAACTGTTTTCATGGAATGAGTATGAATTTCAAAGGCGTCATTTTCGATCTCGACG
GAGTCATCACCGGCACGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MLSVFVVNLRSNSAPFSFSRLLMHTTIVNERSLRTCNFPITLQDIRTLKELYRLKAETRDLRKPIVRNIMKQRVVGKGCL
ESLKNALYSLETIYIDDYTGQRLLRIDGMKQIEVDLTYEIRELQKDIYYLEYGEDRFIEYLAKFIPGFTDYVTEGVEMLR
GKSFNAFITDRDGTTNNYCGRYRSSIQPIYNSVFLSRFAKNCCRYPMIVTSAPLKDFGILNVSINPEHIFVYAGSKGREF
IDIDGQFHSFPIEPGKQELIRLLNERMQLLLLDPSFEKFNFIGSALQMKFGQTTIARQDITRSVNEAESAAFLEKIKGIV
RDIDPEGKNFRIEDTGLDIEIILTIDVDPKTGMIRDFDKGDGLEFICRKMNIDHTGEPVLVCGDTSSDIPMLKKAMEMYD
DVWAIFVTRDEKLMQRVREICPKSYMVPYPDILLTILGLLSL

Sequences:

>Translated_442_residues
MLSVFVVNLRSNSAPFSFSRLLMHTTIVNERSLRTCNFPITLQDIRTLKELYRLKAETRDLRKPIVRNIMKQRVVGKGCL
ESLKNALYSLETIYIDDYTGQRLLRIDGMKQIEVDLTYEIRELQKDIYYLEYGEDRFIEYLAKFIPGFTDYVTEGVEMLR
GKSFNAFITDRDGTTNNYCGRYRSSIQPIYNSVFLSRFAKNCCRYPMIVTSAPLKDFGILNVSINPEHIFVYAGSKGREF
IDIDGQFHSFPIEPGKQELIRLLNERMQLLLLDPSFEKFNFIGSALQMKFGQTTIARQDITRSVNEAESAAFLEKIKGIV
RDIDPEGKNFRIEDTGLDIEIILTIDVDPKTGMIRDFDKGDGLEFICRKMNIDHTGEPVLVCGDTSSDIPMLKKAMEMYD
DVWAIFVTRDEKLMQRVREICPKSYMVPYPDILLTILGLLSL
>Mature_442_residues
MLSVFVVNLRSNSAPFSFSRLLMHTTIVNERSLRTCNFPITLQDIRTLKELYRLKAETRDLRKPIVRNIMKQRVVGKGCL
ESLKNALYSLETIYIDDYTGQRLLRIDGMKQIEVDLTYEIRELQKDIYYLEYGEDRFIEYLAKFIPGFTDYVTEGVEMLR
GKSFNAFITDRDGTTNNYCGRYRSSIQPIYNSVFLSRFAKNCCRYPMIVTSAPLKDFGILNVSINPEHIFVYAGSKGREF
IDIDGQFHSFPIEPGKQELIRLLNERMQLLLLDPSFEKFNFIGSALQMKFGQTTIARQDITRSVNEAESAAFLEKIKGIV
RDIDPEGKNFRIEDTGLDIEIILTIDVDPKTGMIRDFDKGDGLEFICRKMNIDHTGEPVLVCGDTSSDIPMLKKAMEMYD
DVWAIFVTRDEKLMQRVREICPKSYMVPYPDILLTILGLLSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI71987012, Length=420, Percent_Identity=33.8095238095238, Blast_Score=222, Evalue=3e-58,
Organism=Caenorhabditis elegans, GI115533560, Length=427, Percent_Identity=29.9765807962529, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI115533558, Length=427, Percent_Identity=29.9765807962529, Blast_Score=190, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI133963234, Length=274, Percent_Identity=29.1970802919708, Blast_Score=118, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI17568475, Length=431, Percent_Identity=25.5220417633411, Blast_Score=118, Evalue=6e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51010; Mature: 51010

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSVFVVNLRSNSAPFSFSRLLMHTTIVNERSLRTCNFPITLQDIRTLKELYRLKAETRD
CEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCEEHHHHHHHHHHHHHHHHHHH
LRKPIVRNIMKQRVVGKGCLESLKNALYSLETIYIDDYTGQRLLRIDGMKQIEVDLTYEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEECCCEEEEEEEEHHH
RELQKDIYYLEYGEDRFIEYLAKFIPGFTDYVTEGVEMLRGKSFNAFITDRDGTTNNYCG
HHHHHHHEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHH
RYRSSIQPIYNSVFLSRFAKNCCRYPMIVTSAPLKDFGILNVSINPEHIFVYAGSKGREF
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEECCCEEEEEECCCCCEE
IDIDGQFHSFPIEPGKQELIRLLNERMQLLLLDPSFEKFNFIGSALQMKFGQTTIARQDI
EEECCCEEECCCCCCHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHH
TRSVNEAESAAFLEKIKGIVRDIDPEGKNFRIEDTGLDIEIILTIDVDPKTGMIRDFDKG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCC
DGLEFICRKMNIDHTGEPVLVCGDTSSDIPMLKKAMEMYDDVWAIFVTRDEKLMQRVREI
CCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCEEEEEEECCHHHHHHHHHH
CPKSYMVPYPDILLTILGLLSL
CCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MLSVFVVNLRSNSAPFSFSRLLMHTTIVNERSLRTCNFPITLQDIRTLKELYRLKAETRD
CEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCEEHHHHHHHHHHHHHHHHHHH
LRKPIVRNIMKQRVVGKGCLESLKNALYSLETIYIDDYTGQRLLRIDGMKQIEVDLTYEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEECCCEEEEEEEEHHH
RELQKDIYYLEYGEDRFIEYLAKFIPGFTDYVTEGVEMLRGKSFNAFITDRDGTTNNYCG
HHHHHHHEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHH
RYRSSIQPIYNSVFLSRFAKNCCRYPMIVTSAPLKDFGILNVSINPEHIFVYAGSKGREF
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEECCCEEEEEECCCCCEE
IDIDGQFHSFPIEPGKQELIRLLNERMQLLLLDPSFEKFNFIGSALQMKFGQTTIARQDI
EEECCCEEECCCCCCHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHH
TRSVNEAESAAFLEKIKGIVRDIDPEGKNFRIEDTGLDIEIILTIDVDPKTGMIRDFDKG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCC
DGLEFICRKMNIDHTGEPVLVCGDTSSDIPMLKKAMEMYDDVWAIFVTRDEKLMQRVREI
CCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCEEEEEEECCHHHHHHHHHH
CPKSYMVPYPDILLTILGLLSL
CCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA