| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is f1pep1 [H]
Identifier: 21674124
GI number: 21674124
Start: 1222692
End: 1224779
Strand: Direct
Name: f1pep1 [H]
Synonym: CT1301
Alternate gene names: 21674124
Gene position: 1222692-1224779 (Clockwise)
Preceding gene: 21674123
Following gene: 21674127
Centisome position: 56.74
GC content: 58.57
Gene sequence:
>2088_bases ATGGATGCGCCTTCCGCCAATGTCGTCGAAACCGTCTGCGGCGAACGCATCGCAGACCCATACCGTCCGCTCGAAAATCT CAAAGACCCGAAAGTCGCCGCCTGGTACCGGCGCGAGTCGGATCACGCCCGCCAGGTGCTCGACGCCATTCCGGGCCGCA ACGAACTCATCGAAAAGATGAAGGAGTTCGACCAGCGCAGAAAAGAGAAGGTTTTCGATCTTTCCATTACGGATAACGAC CACTACTTCTACCTCAAGCAGACGCCCGTGGACGAAACCGGCAAACTCTACACCCGCAAGGGATACAAAGGTCAGGAGCG ATTGCTTTTCGATCCGACAACATACAAGGACGGAAGCGGCAGCACCTTCGTCATCAGCGAAGTCGCACCGAATATCGACG CCTCAAAGGTGATCGTCACCGTCTCGCCGAACGGTTCGGAAAATTCCGTCATGCTGATCATTGACGTCAGGGACGGCCAC ATCTGGCCCGAGAGGATTGACCGCTGCTGGTTCGCTTCGCCGTCGTGGCTTCCAGACGGCAAGTCGTTTTTCTACAACCG GATGAACACCGCCGATCTGCACGACAAAGCACGTGAGCTCGACAGCAAGGTGTTGCTGCACGTGGTTGGCACCGATCCAT CGACCGACCGCGAAATCTTTTCACGCACCCACAATCCCGCCCTGCCCATCAAGCCTGAGGACATTCCGTCGGTCATATAC GACCGGAAAAGCGAGAAAATTTTCGCCTTCGTCGGCAGCGTCGATCCCAGAGTCACCGCATGGTATGCTCCTGCCAGGTT CTGGAACGAAAAAACCATCCCCTGGAAAACGCTCTTCCGCCCTGAAGACGATGTTTACGATTTTGCCGCGACCAAACACA ATCTCTACGTCTTCACACCGAAGAACGCGCCGCGCTTCAAAGTACTGAAAACCTCGCTCGACCACCCCGATCTGGCGACC GCCGAAACGGTCATTCCGGAACCGGCGGAGGGCACCCTTACCGCCCTGGCGCTGACCAACGAAGGACTCTTCTACACCAT CTCCACCAACGGCGTCCGGGAGGAGTTGTATCATCTGAACTACGGCAGCACAAAGCCGGAAAAGATCGAGACTCCGTTCG AGGCGGGCACGATGTCGATCGGTTCAAAGGGATTCGACAGGCCTGAACTGTGGACGGTCATAGGCGGCTGGAACCACGAC TATCGCCGCTACCGCTACGATGCGAAGCACAATCGTTTCATCGACGAAACGCTCTCGTCGAAGGCGAGCTACCCCGAATA CGACAACCTTGAAGTCAAGGAGGTAATGGCGACCTCCTATGACGGCGTCAAGGTGCCGCTGTCGCTGATCTACAATCGCG GCATCAGGATGGATGGCAAAAATCCCGTGCTGATCTACGGTTACGGCGCGTATGGCAACTCGATGACCCCGTTCTTCAAC CCCTCGTTCCTGCTCTGGACCTACAAGGGCGGCATCCTCGCCGTGGCCCACGTACGCGGCGGCGGAGAGCTGGGCGACGC CTGGCACAAGGCGGGCATGAAATCGACCAAGCCCAACACCTGGAAAGACCTCATCGCCTGCGCCGAATATCTGATTCATG AGGGCTACACCTCGCCCGAACACATCGCCATCAACTCGGCCAGCGCAGGCGGCATTCTCATCGGGCGCGCCATAACCGAG CGCCCCGACCTCTTCGCCGCCGCCATGCCGCAGGTCGGCGTGCTCAACGCGGTGAGAGGCGAATTCAGCCCCAATGGCCC GGTCAACGTGCCCGAATTCGGCACCGTCAAAAACCCCGAGGAGTGCAAGGCGCTCCTCGAAATGGATGCCTACCTGCACA TCCGCGACGGCGTAAAATACCCCGCAGTGCTCATCACAGCAGGCATGAACGACCCGAGAGTCCCCGCCTGGCAACCGGCC AAATTCGCCGCAAGGTTACAGGAAGCCACCACCTCCGGCAAACCGGTGCTTTTTTTCACGGATTACAAAGCCGGCCACGG CATCGGCGACACGAAGACGAAGCAGTTCGAATCGCTCGCCGACATGCTGAGCTTCGGATTGTGGCAGACCGGCGGAGCCG CCCAATGA
Upstream 100 bases:
>100_bases TTACAGAACCATGCTCGCCGGGCACACCCCGGCCATCCTGTGCCTCTCAGCCCTCCTGTTTTCCACGCCAATTCCTGCCC GTGCAGATAACAAGGCAAAC
Downstream 100 bases:
>100_bases TGAATTTTGAATGAAGAATTGCAGGGGCCACCAAGTCCACGACGTCTCTCCAGTCCACAATTTCCGAAGCCTCTTGGCTG CCCACTCAAAACGTGAAGCA
Product: prolyl oligopeptidase family protein
Products: NA
Alternate protein names: Post-proline cleaving enzyme; Proline-specific endopeptidase; PE; PSE [H]
Number of amino acids: Translated: 695; Mature: 695
Protein sequence:
>695_residues MDAPSANVVETVCGERIADPYRPLENLKDPKVAAWYRRESDHARQVLDAIPGRNELIEKMKEFDQRRKEKVFDLSITDND HYFYLKQTPVDETGKLYTRKGYKGQERLLFDPTTYKDGSGSTFVISEVAPNIDASKVIVTVSPNGSENSVMLIIDVRDGH IWPERIDRCWFASPSWLPDGKSFFYNRMNTADLHDKARELDSKVLLHVVGTDPSTDREIFSRTHNPALPIKPEDIPSVIY DRKSEKIFAFVGSVDPRVTAWYAPARFWNEKTIPWKTLFRPEDDVYDFAATKHNLYVFTPKNAPRFKVLKTSLDHPDLAT AETVIPEPAEGTLTALALTNEGLFYTISTNGVREELYHLNYGSTKPEKIETPFEAGTMSIGSKGFDRPELWTVIGGWNHD YRRYRYDAKHNRFIDETLSSKASYPEYDNLEVKEVMATSYDGVKVPLSLIYNRGIRMDGKNPVLIYGYGAYGNSMTPFFN PSFLLWTYKGGILAVAHVRGGGELGDAWHKAGMKSTKPNTWKDLIACAEYLIHEGYTSPEHIAINSASAGGILIGRAITE RPDLFAAAMPQVGVLNAVRGEFSPNGPVNVPEFGTVKNPEECKALLEMDAYLHIRDGVKYPAVLITAGMNDPRVPAWQPA KFAARLQEATTSGKPVLFFTDYKAGHGIGDTKTKQFESLADMLSFGLWQTGGAAQ
Sequences:
>Translated_695_residues MDAPSANVVETVCGERIADPYRPLENLKDPKVAAWYRRESDHARQVLDAIPGRNELIEKMKEFDQRRKEKVFDLSITDND HYFYLKQTPVDETGKLYTRKGYKGQERLLFDPTTYKDGSGSTFVISEVAPNIDASKVIVTVSPNGSENSVMLIIDVRDGH IWPERIDRCWFASPSWLPDGKSFFYNRMNTADLHDKARELDSKVLLHVVGTDPSTDREIFSRTHNPALPIKPEDIPSVIY DRKSEKIFAFVGSVDPRVTAWYAPARFWNEKTIPWKTLFRPEDDVYDFAATKHNLYVFTPKNAPRFKVLKTSLDHPDLAT AETVIPEPAEGTLTALALTNEGLFYTISTNGVREELYHLNYGSTKPEKIETPFEAGTMSIGSKGFDRPELWTVIGGWNHD YRRYRYDAKHNRFIDETLSSKASYPEYDNLEVKEVMATSYDGVKVPLSLIYNRGIRMDGKNPVLIYGYGAYGNSMTPFFN PSFLLWTYKGGILAVAHVRGGGELGDAWHKAGMKSTKPNTWKDLIACAEYLIHEGYTSPEHIAINSASAGGILIGRAITE RPDLFAAAMPQVGVLNAVRGEFSPNGPVNVPEFGTVKNPEECKALLEMDAYLHIRDGVKYPAVLITAGMNDPRVPAWQPA KFAARLQEATTSGKPVLFFTDYKAGHGIGDTKTKQFESLADMLSFGLWQTGGAAQ >Mature_695_residues MDAPSANVVETVCGERIADPYRPLENLKDPKVAAWYRRESDHARQVLDAIPGRNELIEKMKEFDQRRKEKVFDLSITDND HYFYLKQTPVDETGKLYTRKGYKGQERLLFDPTTYKDGSGSTFVISEVAPNIDASKVIVTVSPNGSENSVMLIIDVRDGH IWPERIDRCWFASPSWLPDGKSFFYNRMNTADLHDKARELDSKVLLHVVGTDPSTDREIFSRTHNPALPIKPEDIPSVIY DRKSEKIFAFVGSVDPRVTAWYAPARFWNEKTIPWKTLFRPEDDVYDFAATKHNLYVFTPKNAPRFKVLKTSLDHPDLAT AETVIPEPAEGTLTALALTNEGLFYTISTNGVREELYHLNYGSTKPEKIETPFEAGTMSIGSKGFDRPELWTVIGGWNHD YRRYRYDAKHNRFIDETLSSKASYPEYDNLEVKEVMATSYDGVKVPLSLIYNRGIRMDGKNPVLIYGYGAYGNSMTPFFN PSFLLWTYKGGILAVAHVRGGGELGDAWHKAGMKSTKPNTWKDLIACAEYLIHEGYTSPEHIAINSASAGGILIGRAITE RPDLFAAAMPQVGVLNAVRGEFSPNGPVNVPEFGTVKNPEECKALLEMDAYLHIRDGVKYPAVLITAGMNDPRVPAWQPA KFAARLQEATTSGKPVLFFTDYKAGHGIGDTKTKQFESLADMLSFGLWQTGGAAQ
Specific function: Cleaves peptide bonds on the C-terminal side of prolyl residues within peptides that are up to approximately 30 amino acids long. Has an absolute requirement for an X-Pro bond in the trans configuration immediately preceding the Pro-Y scissible bond [H]
COG id: COG1505
COG function: function code E; Serine proteases of the peptidase family S9A
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9A family [H]
Homologues:
Organism=Homo sapiens, GI41349456, Length=703, Percent_Identity=26.0312944523471, Blast_Score=252, Evalue=9e-67, Organism=Homo sapiens, GI284172420, Length=222, Percent_Identity=33.7837837837838, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI284172413, Length=222, Percent_Identity=33.7837837837838, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI70778815, Length=222, Percent_Identity=33.7837837837838, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI108860686, Length=222, Percent_Identity=33.7837837837838, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI284172438, Length=222, Percent_Identity=33.7837837837838, Blast_Score=108, Evalue=2e-23, Organism=Homo sapiens, GI284172431, Length=222, Percent_Identity=33.7837837837838, Blast_Score=108, Evalue=2e-23, Organism=Homo sapiens, GI108860692, Length=213, Percent_Identity=33.8028169014084, Blast_Score=106, Evalue=7e-23, Organism=Escherichia coli, GI1788150, Length=701, Percent_Identity=25.8202567760342, Blast_Score=173, Evalue=3e-44, Organism=Drosophila melanogaster, GI24583414, Length=704, Percent_Identity=27.1306818181818, Blast_Score=206, Evalue=3e-53, Organism=Drosophila melanogaster, GI221510989, Length=702, Percent_Identity=24.9287749287749, Blast_Score=188, Evalue=9e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002471 - InterPro: IPR001375 - InterPro: IPR002470 - InterPro: IPR004106 [H]
Pfam domain/function: PF00326 Peptidase_S9; PF02897 Peptidase_S9_N [H]
EC number: =3.4.21.26 [H]
Molecular weight: Translated: 77944; Mature: 77944
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAPSANVVETVCGERIADPYRPLENLKDPKVAAWYRRESDHARQVLDAIPGRNELIEKM CCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHH KEFDQRRKEKVFDLSITDNDHYFYLKQTPVDETGKLYTRKGYKGQERLLFDPTTYKDGSG HHHHHHHHHEEEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCCCCEEECCCCCCCCCC STFVISEVAPNIDASKVIVTVSPNGSENSVMLIIDVRDGHIWPERIDRCWFASPSWLPDG CEEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHEECCCCCCCCCC KSFFYNRMNTADLHDKARELDSKVLLHVVGTDPSTDREIFSRTHNPALPIKPEDIPSVIY HHHHHCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCHHHH DRKSEKIFAFVGSVDPRVTAWYAPARFWNEKTIPWKTLFRPEDDVYDFAATKHNLYVFTP CCCCCEEEEEECCCCCCEEEEECHHHHCCCCCCCHHEECCCCCCHHHHHCCCCCEEEEEC KNAPRFKVLKTSLDHPDLATAETVIPEPAEGTLTALALTNEGLFYTISTNGVREELYHLN CCCCCEEEEEECCCCCCCCCHHHCCCCCCCCCEEEEEEECCCEEEEEECCCHHHHHHCCC YGSTKPEKIETPFEAGTMSIGSKGFDRPELWTVIGGWNHDYRRYRYDAKHNRFIDETLSS CCCCCCHHCCCCCCCCCEECCCCCCCCCCEEEEECCCCCCHHHEECCCHHCHHHHHHHHC KASYPEYDNLEVKEVMATSYDGVKVPLSLIYNRGIRMDGKNPVLIYGYGAYGNSMTPFFN CCCCCCCCCCCHHHHHHCCCCCCEEEHHHHHCCCEEECCCCCEEEEEECCCCCCCCCCCC PSFLLWTYKGGILAVAHVRGGGELGDAWHKAGMKSTKPNTWKDLIACAEYLIHEGYTSPE CCEEEEEECCCEEEEEEECCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC HIAINSASAGGILIGRAITERPDLFAAAMPQVGVLNAVRGEFSPNGPVNVPEFGTVKNPE EEEEECCCCCCEEEECHHCCCCCHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHH ECKALLEMDAYLHIRDGVKYPAVLITAGMNDPRVPAWQPAKFAARLQEATTSGKPVLFFT HHHHHHHHCCEEEEECCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEE DYKAGHGIGDTKTKQFESLADMLSFGLWQTGGAAQ CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MDAPSANVVETVCGERIADPYRPLENLKDPKVAAWYRRESDHARQVLDAIPGRNELIEKM CCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHH KEFDQRRKEKVFDLSITDNDHYFYLKQTPVDETGKLYTRKGYKGQERLLFDPTTYKDGSG HHHHHHHHHEEEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCCCCEEECCCCCCCCCC STFVISEVAPNIDASKVIVTVSPNGSENSVMLIIDVRDGHIWPERIDRCWFASPSWLPDG CEEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHEECCCCCCCCCC KSFFYNRMNTADLHDKARELDSKVLLHVVGTDPSTDREIFSRTHNPALPIKPEDIPSVIY HHHHHCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCHHHH DRKSEKIFAFVGSVDPRVTAWYAPARFWNEKTIPWKTLFRPEDDVYDFAATKHNLYVFTP CCCCCEEEEEECCCCCCEEEEECHHHHCCCCCCCHHEECCCCCCHHHHHCCCCCEEEEEC KNAPRFKVLKTSLDHPDLATAETVIPEPAEGTLTALALTNEGLFYTISTNGVREELYHLN CCCCCEEEEEECCCCCCCCCHHHCCCCCCCCCEEEEEEECCCEEEEEECCCHHHHHHCCC YGSTKPEKIETPFEAGTMSIGSKGFDRPELWTVIGGWNHDYRRYRYDAKHNRFIDETLSS CCCCCCHHCCCCCCCCCEECCCCCCCCCCEEEEECCCCCCHHHEECCCHHCHHHHHHHHC KASYPEYDNLEVKEVMATSYDGVKVPLSLIYNRGIRMDGKNPVLIYGYGAYGNSMTPFFN CCCCCCCCCCCHHHHHHCCCCCCEEEHHHHHCCCEEECCCCCEEEEEECCCCCCCCCCCC PSFLLWTYKGGILAVAHVRGGGELGDAWHKAGMKSTKPNTWKDLIACAEYLIHEGYTSPE CCEEEEEECCCEEEEEEECCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC HIAINSASAGGILIGRAITERPDLFAAAMPQVGVLNAVRGEFSPNGPVNVPEFGTVKNPE EEEEECCCCCCEEEECHHCCCCCHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHH ECKALLEMDAYLHIRDGVKYPAVLITAGMNDPRVPAWQPAKFAARLQEATTSGKPVLFFT HHHHHHHHCCEEEEECCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEE DYKAGHGIGDTKTKQFESLADMLSFGLWQTGGAAQ CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1840588; 7764331 [H]