| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674123
Identifier: 21674123
GI number: 21674123
Start: 1221971
End: 1222549
Strand: Direct
Name: 21674123
Synonym: CT1300
Alternate gene names: NA
Gene position: 1221971-1222549 (Clockwise)
Preceding gene: 21674122
Following gene: 21674124
Centisome position: 56.71
GC content: 59.76
Gene sequence:
>579_bases ATGAAAGTCATTGGCATCAACGGCAGCCCGCGCCGGGCGGGCAACACCTCGATCATGCTCAAGACCATCTTCGAGGTGCT CGAAGATGAAGGCATCGAAACCGAACTGATCCAGGTCGGCGGCACAAACATCAAAGGATGCCGCGCCTGCTACGCCTGCA TCAAAAACAAGAACAGCGAGTGCTCAACCAAGGGCGACGGCTTCAACGAAATCTTCGCGAAGATGGTCGAAGCGGACGGC ATGATCCTCGGCTCACCCACCTACTTCGCCGACATCACGCCCGAACTGAAAGCGCTCATCGACCGCGCCGGCTTCGTGTC GCGCACCAACGGCCAGCTGTTCCGCCACAAGGTCGGCGCGTCGGTGGTCTCGCTCCGGCGGGGCGGCGGCATTCACGCCT ACGACAGCATTAACCACCTCTTCCAGATCTGCCAGATGTTCATGGTCGGCTCGACCTACTGGAACCTCGGCTTCGGTGGA CGTGACGGCGGCGAAGTCGTCAACGACACCGAAGGCATGGAAAACATGCGCGACCTCGGCCACTCGATGGCCTTCCTGTT GAAGAAACTGCACAACTGA
Upstream 100 bases:
>100_bases GATCACTCCGGTGTTACTTCTCTGAACTTATCGCTTATATTGCCGCTATATTTTTTGAATTCTCCGGACAACGATTCTCC ATCCGGAACAGCGCGAAACC
Downstream 100 bases:
>100_bases TTCGAAACCGATACCTACACTGTTGACACACCGATACATGAATTACAGAACCATGCTCGCCGGGCACACCCCGGCCATCC TGTGCCTCTCAGCCCTCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Isf-2; MCJ-2; Mj2 [H]
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MKVIGINGSPRRAGNTSIMLKTIFEVLEDEGIETELIQVGGTNIKGCRACYACIKNKNSECSTKGDGFNEIFAKMVEADG MILGSPTYFADITPELKALIDRAGFVSRTNGQLFRHKVGASVVSLRRGGGIHAYDSINHLFQICQMFMVGSTYWNLGFGG RDGGEVVNDTEGMENMRDLGHSMAFLLKKLHN
Sequences:
>Translated_192_residues MKVIGINGSPRRAGNTSIMLKTIFEVLEDEGIETELIQVGGTNIKGCRACYACIKNKNSECSTKGDGFNEIFAKMVEADG MILGSPTYFADITPELKALIDRAGFVSRTNGQLFRHKVGASVVSLRRGGGIHAYDSINHLFQICQMFMVGSTYWNLGFGG RDGGEVVNDTEGMENMRDLGHSMAFLLKKLHN >Mature_192_residues MKVIGINGSPRRAGNTSIMLKTIFEVLEDEGIETELIQVGGTNIKGCRACYACIKNKNSECSTKGDGFNEIFAKMVEADG MILGSPTYFADITPELKALIDRAGFVSRTNGQLFRHKVGASVVSLRRGGGIHAYDSINHLFQICQMFMVGSTYWNLGFGG RDGGEVVNDTEGMENMRDLGHSMAFLLKKLHN
Specific function: Redox-active protein probably involved in electron transport [H]
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family. Isf subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 20990; Mature: 20990
Theoretical pI: Translated: 7.46; Mature: 7.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVIGINGSPRRAGNTSIMLKTIFEVLEDEGIETELIQVGGTNIKGCRACYACIKNKNSE CEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCC CSTKGDGFNEIFAKMVEADGMILGSPTYFADITPELKALIDRAGFVSRTNGQLFRHKVGA CCCCCCCHHHHHHHHHHHCCEEECCCCEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHH SVVSLRRGGGIHAYDSINHLFQICQMFMVGSTYWNLGFGGRDGGEVVNDTEGMENMRDLG HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCHHHHHHHHHHH HSMAFLLKKLHN HHHHHHHHHHCC >Mature Secondary Structure MKVIGINGSPRRAGNTSIMLKTIFEVLEDEGIETELIQVGGTNIKGCRACYACIKNKNSE CEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCC CSTKGDGFNEIFAKMVEADGMILGSPTYFADITPELKALIDRAGFVSRTNGQLFRHKVGA CCCCCCCHHHHHHHHHHHCCEEECCCCEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHH SVVSLRRGGGIHAYDSINHLFQICQMFMVGSTYWNLGFGGRDGGEVVNDTEGMENMRDLG HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCHHHHHHHHHHH HSMAFLLKKLHN HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]