Click here to switch to the map view.

The map label for this gene is ybgC [C]

Identifier: 21674087

GI number: 21674087

Start: 1185164

End: 1185628

Strand: Reverse

Name: ybgC [C]

Synonym: CT1264

Alternate gene names: 21674087

Gene position: 1185628-1185164 (Counterclockwise)

Preceding gene: 21674088

Following gene: 21674086

Centisome position: 55.02

GC content: 57.42

Gene sequence:

>465_bases
TTGAGAAGAGTGTTCATCCATACCTTTGAAGTTCCCGGATCGTCGATCGACGGATATGGGCATGTCAGCAATATCGAATA
TCTCCGGTGGATGCAGGATGGAGCTACCGCTCATACTGCTTCCGAAGGCTGGACGCTCGACCGTTACCGGCAAAGCCGGG
CCATCTGGGTTGTGCGCCGCCATTCCATTGATTATCTCATGCCCGCATATGCCAGTGACCGGCTCGATCTGCACACCTGG
ATCGAGTGGGTCAGGGATTGTCAGTCGGTGCGCCGCTATTTGTTGACCAGAGAGGGAGACGTGCGTGCCCTCGCCAGAGC
TGAAACCCTCTGGGTGTGTGTCGACCCGGAGTCAGGACGCCCGAAACGGGTGCCGGAAGACTTCATTCAGGCTTTTGAGC
TGGTTGTCGGTGGCGAGGCCGAAGCGCTTCGTATCGTCGGCAAAGCGTCCGATTCAGCAAGCTGA

Upstream 100 bases:

>100_bases
GACTGCCGATGCAAAATCGGCAAAAAGCCGCAGCTGGAAAGAGGGGCTTTCTCTGTCGGAGAGAGCCGTTCGTTCTCCGA
ATGGTTGAGGGGAGCTGCAT

Downstream 100 bases:

>100_bases
TTCAGTTTCCGACCGCAGTTTATGTCAATTTCCAGTCAAATATCGAGTCATGGTTAAGCATATCGTGATGTGGCGTCTCT
GCGACGAGGCGCACGGTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Thioesterase; Thioesterase Family Protein; Thioesterase Superfamily; 4-Hydroxybenzoyl-CoA Thioesterase Domain Protein; 4-Hydroxybenzoyl-CoA Thioesterase Domain-Containing Protein; NH(3)-Dependent NAD(+) Synthetase; Acyl-ACP Thioesterase; 4-Diphosphocytidyl-2-C-Methyl-D-Erythritol Kinase

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MRRVFIHTFEVPGSSIDGYGHVSNIEYLRWMQDGATAHTASEGWTLDRYRQSRAIWVVRRHSIDYLMPAYASDRLDLHTW
IEWVRDCQSVRRYLLTREGDVRALARAETLWVCVDPESGRPKRVPEDFIQAFELVVGGEAEALRIVGKASDSAS

Sequences:

>Translated_154_residues
MRRVFIHTFEVPGSSIDGYGHVSNIEYLRWMQDGATAHTASEGWTLDRYRQSRAIWVVRRHSIDYLMPAYASDRLDLHTW
IEWVRDCQSVRRYLLTREGDVRALARAETLWVCVDPESGRPKRVPEDFIQAFELVVGGEAEALRIVGKASDSAS
>Mature_154_residues
MRRVFIHTFEVPGSSIDGYGHVSNIEYLRWMQDGATAHTASEGWTLDRYRQSRAIWVVRRHSIDYLMPAYASDRLDLHTW
IEWVRDCQSVRRYLLTREGDVRALARAETLWVCVDPESGRPKRVPEDFIQAFELVVGGEAEALRIVGKASDSAS

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17711; Mature: 17711

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVFIHTFEVPGSSIDGYGHVSNIEYLRWMQDGATAHTASEGWTLDRYRQSRAIWVVRR
CCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHCCCEEEEEEE
HSIDYLMPAYASDRLDLHTWIEWVRDCQSVRRYLLTREGDVRALARAETLWVCVDPESGR
CCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCEEEEEEECCCCCC
PKRVPEDFIQAFELVVGGEAEALRIVGKASDSAS
CCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MRRVFIHTFEVPGSSIDGYGHVSNIEYLRWMQDGATAHTASEGWTLDRYRQSRAIWVVRR
CCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHCCCEEEEEEE
HSIDYLMPAYASDRLDLHTWIEWVRDCQSVRRYLLTREGDVRALARAETLWVCVDPESGR
CCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCEEEEEEECCCCCC
PKRVPEDFIQAFELVVGGEAEALRIVGKASDSAS
CCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA