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The map label for this gene is 21674080

Identifier: 21674080

GI number: 21674080

Start: 1181408

End: 1181827

Strand: Direct

Name: 21674080

Synonym: CT1257

Alternate gene names: NA

Gene position: 1181408-1181827 (Clockwise)

Preceding gene: 21674075

Following gene: 21674081

Centisome position: 54.82

GC content: 52.38

Gene sequence:

>420_bases
ATGATAGAGATCAAGAAAACCCCGATGGACCTGATCGATGACATCTACAGCCTTGCCTACTGGATGACCGGCAGTGAGAA
GGCATCCAGCGAACTGCTCAACACCACGTGCCTGAATGCAGACCTGAAAGCACCGGAAACCGAGGTGCTCAAGACTTTCC
GCGAATGTTATCTCGATACGTATGGCCAGCATGCCGATCTCGACATGCACGAAACGACGAAGGAGAGTGTCAGCCTGATC
GATTCACTGAAGCAGTGGACGGCAGACATCAAGCTTTCGGTGCTCCTGTCAGAACTGACCGGGTTGAAACACGCGCAGAT
CTCTGATATCATCGGAAAACCCGTCGATACAGTCAGACTCTGGCTCTTCTGGGGTCGCAAGTTTTTCGCTCACGACAATC
TCATGAGAGCTTCCGCCTGA

Upstream 100 bases:

>100_bases
TTGCATTTTTCGTAAAAAAAAACTGGACAGGGAATTTTTTTTCACTACATTAAAAAAGGACAAAAATTATCCTCTTTATC
CAAACAAACAAGGAGCGACC

Downstream 100 bases:

>100_bases
CGTCACTCCACATACTCCTCGGTAAAGGGCCAGCTCGTTTACGGGCTGGCCTTTTGCTTTTCCGGCGAGACGGACGTATA
TTTTTTCGCCTGTCAACCAT

Product: hypothetical protein

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Factor; ECF Subfamily RNA Polymerase Sigma-24 Subunit; Sigma-

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MIEIKKTPMDLIDDIYSLAYWMTGSEKASSELLNTTCLNADLKAPETEVLKTFRECYLDTYGQHADLDMHETTKESVSLI
DSLKQWTADIKLSVLLSELTGLKHAQISDIIGKPVDTVRLWLFWGRKFFAHDNLMRASA

Sequences:

>Translated_139_residues
MIEIKKTPMDLIDDIYSLAYWMTGSEKASSELLNTTCLNADLKAPETEVLKTFRECYLDTYGQHADLDMHETTKESVSLI
DSLKQWTADIKLSVLLSELTGLKHAQISDIIGKPVDTVRLWLFWGRKFFAHDNLMRASA
>Mature_139_residues
MIEIKKTPMDLIDDIYSLAYWMTGSEKASSELLNTTCLNADLKAPETEVLKTFRECYLDTYGQHADLDMHETTKESVSLI
DSLKQWTADIKLSVLLSELTGLKHAQISDIIGKPVDTVRLWLFWGRKFFAHDNLMRASA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15842; Mature: 15842

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEIKKTPMDLIDDIYSLAYWMTGSEKASSELLNTTCLNADLKAPETEVLKTFRECYLDT
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
YGQHADLDMHETTKESVSLIDSLKQWTADIKLSVLLSELTGLKHAQISDIIGKPVDTVRL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHH
WLFWGRKFFAHDNLMRASA
HHHHHHHHHHHCCHHHCCC
>Mature Secondary Structure
MIEIKKTPMDLIDDIYSLAYWMTGSEKASSELLNTTCLNADLKAPETEVLKTFRECYLDT
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
YGQHADLDMHETTKESVSLIDSLKQWTADIKLSVLLSELTGLKHAQISDIIGKPVDTVRL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHH
WLFWGRKFFAHDNLMRASA
HHHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA