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The map label for this gene is hdrB [H]

Identifier: 21674068

GI number: 21674068

Start: 1170918

End: 1172420

Strand: Direct

Name: hdrB [H]

Synonym: CT1245

Alternate gene names: 21674068

Gene position: 1170918-1172420 (Clockwise)

Preceding gene: 21674064

Following gene: 21674069

Centisome position: 54.34

GC content: 58.22

Gene sequence:

>1503_bases
ATGGAGCATACTATCCGTACAGATTCATTGAAGCGGCAGCTCGAACAAACGACAGGCAACCATTACGCCTGCTGCTATCA
ATGCGGCAAATGCACCGCGGGATGTCCCGCCGGGGGCTTCATGGACAACCCGCCAGCCAGAATCATGCGCCTCGTGCAGG
CCGGCTACGTCGAGGAGGCCATGCAGAGCGATTCTCTCTGGTATTGCATCGGCTGCATGACCTGTACAGCCCGTTGCCCG
CAGAACATGGAGATCGCCGGCACAATGGATGCCGTCAGGGAAATGGCTCTAAAAAGCGGAATCATCTCCTCCGATAAGGC
CAAAAAGCTGGTCACCGCCTTCCATACCTCGTTCCTCAACACGGTACGCAAGAGCGGCCGCTTGCAGGAACTCGCGCTCG
TCAACAGCTACAAGCTGCGCACCCGCACCTTTTTGCAGGACGCCGGCGCTGGCCTCAAAATGATAAAGCAGGGCAAAATC
AATCCGGTGACGGCTATCACGGCAAAAGAGACCGTCGAACAGAAGGGGCAGATTGAGAAAATTTTCAAGATTGCTGAACA
GGAAAGTCATACGGCTGCGCCAAAACGCAAGCCTGTCAAGCGCACCTTCAAAGCCAACGAACCGGTCAGGATCACTCCCG
GCATGACCATCGGCTACTATCCCGGCTGCTCGCTCTCCGGCACAGCCAAGGATTACGACATCTCCATCCGCAAGATGTGC
GACCGGCTTGGCATAAGGCTCCATGAAATCGAGGACTGGAACTGCTGCGGCGCGAGTTCGGCTCACGCCACCAACCACAA
GCTCTCAGTGCTTCTGCCTGCGAGAAACCAGGCGCTGGCCGACCAGCAAGGCTTCGACTACGTACTCGCCCCCTGCGCCG
CCTGCCTGAACCGCCAGGTGACTGCCCGAAAAGCGCTCATGGAGTCAGAAGAGCTGCGCAACGAGCTGAAGAGCATAATG
GGACGCGACACCGAATGCAAGGCGCAGTTCATCGGCATCATGCAGGTGCTCGAAGGCATGGATCCCGAAGAGATCAAAAA
ACGGGTCACCCACCCGCTCAAGGATATGCCGCTGGCCTGCTACTACGGCTGCCTGCTGGTGCGTCCTTTCGATGCGATGG
GTTACGACGACCCGGAAAATCCGACCAAGATGGAGGCAATCATCGAGGCGCTCGGCGCCAAGCCGGTTGACTGGGCCTAC
AAGGTCGAGTGCTGCGGCGCGGGCCTGACGATGGCCCAGCAGGAGATGATCGAAGATCTGACCCACAAGATCGCCAAAAA
CGCAACCGTCAACGGTGCGGGCGGTTTCGTCGTGGCCTGTCCGCTCTGCCACACCAACCTCGACATGCGTCAGGAAGGAA
TGCGCAAACGGTACAACGACGTCGGCGAGATGCCGGTGTACTACATTTCCGATCTGGTCGCGATGGCTTGCGGCGCGAGT
CCTGAAGAGGTCGCACTCGACAAACACTTCGTTCCGGCAACCGGCATGGTCAGAAACCATTAA

Upstream 100 bases:

>100_bases
TGACGTAGAATCTTACTGTATCACCGCAGCCAAACGGCTCACCGGCGTTCGAAACGTCAGGCAGTTTCCAGGATACCATA
ACATCAGCAGTCATCAATCG

Downstream 100 bases:

>100_bases
TGCGCTCGCAGTGTATGAGAAAAAAAGCTGTTTGAATCGTACATTAAGAGTTCTAATCAGGTGGTTTTTCCGACCGGCTC
CGGCAACATCCCGTCATCCA

Product: heterodisulfide reductase, subunit C/succinate dehydrogenase, subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 500

Protein sequence:

>500_residues
MEHTIRTDSLKRQLEQTTGNHYACCYQCGKCTAGCPAGGFMDNPPARIMRLVQAGYVEEAMQSDSLWYCIGCMTCTARCP
QNMEIAGTMDAVREMALKSGIISSDKAKKLVTAFHTSFLNTVRKSGRLQELALVNSYKLRTRTFLQDAGAGLKMIKQGKI
NPVTAITAKETVEQKGQIEKIFKIAEQESHTAAPKRKPVKRTFKANEPVRITPGMTIGYYPGCSLSGTAKDYDISIRKMC
DRLGIRLHEIEDWNCCGASSAHATNHKLSVLLPARNQALADQQGFDYVLAPCAACLNRQVTARKALMESEELRNELKSIM
GRDTECKAQFIGIMQVLEGMDPEEIKKRVTHPLKDMPLACYYGCLLVRPFDAMGYDDPENPTKMEAIIEALGAKPVDWAY
KVECCGAGLTMAQQEMIEDLTHKIAKNATVNGAGGFVVACPLCHTNLDMRQEGMRKRYNDVGEMPVYYISDLVAMACGAS
PEEVALDKHFVPATGMVRNH

Sequences:

>Translated_500_residues
MEHTIRTDSLKRQLEQTTGNHYACCYQCGKCTAGCPAGGFMDNPPARIMRLVQAGYVEEAMQSDSLWYCIGCMTCTARCP
QNMEIAGTMDAVREMALKSGIISSDKAKKLVTAFHTSFLNTVRKSGRLQELALVNSYKLRTRTFLQDAGAGLKMIKQGKI
NPVTAITAKETVEQKGQIEKIFKIAEQESHTAAPKRKPVKRTFKANEPVRITPGMTIGYYPGCSLSGTAKDYDISIRKMC
DRLGIRLHEIEDWNCCGASSAHATNHKLSVLLPARNQALADQQGFDYVLAPCAACLNRQVTARKALMESEELRNELKSIM
GRDTECKAQFIGIMQVLEGMDPEEIKKRVTHPLKDMPLACYYGCLLVRPFDAMGYDDPENPTKMEAIIEALGAKPVDWAY
KVECCGAGLTMAQQEMIEDLTHKIAKNATVNGAGGFVVACPLCHTNLDMRQEGMRKRYNDVGEMPVYYISDLVAMACGAS
PEEVALDKHFVPATGMVRNH
>Mature_500_residues
MEHTIRTDSLKRQLEQTTGNHYACCYQCGKCTAGCPAGGFMDNPPARIMRLVQAGYVEEAMQSDSLWYCIGCMTCTARCP
QNMEIAGTMDAVREMALKSGIISSDKAKKLVTAFHTSFLNTVRKSGRLQELALVNSYKLRTRTFLQDAGAGLKMIKQGKI
NPVTAITAKETVEQKGQIEKIFKIAEQESHTAAPKRKPVKRTFKANEPVRITPGMTIGYYPGCSLSGTAKDYDISIRKMC
DRLGIRLHEIEDWNCCGASSAHATNHKLSVLLPARNQALADQQGFDYVLAPCAACLNRQVTARKALMESEELRNELKSIM
GRDTECKAQFIGIMQVLEGMDPEEIKKRVTHPLKDMPLACYYGCLLVRPFDAMGYDDPENPTKMEAIIEALGAKPVDWAY
KVECCGAGLTMAQQEMIEDLTHKIAKNATVNGAGGFVVACPLCHTNLDMRQEGMRKRYNDVGEMPVYYISDLVAMACGAS
PEEVALDKHFVPATGMVRNH

Specific function: Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrB may have a function in energy transduction [H]

COG id: COG2048

COG function: function code C; Heterodisulfide reductase, subunit B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hdrB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017678
- InterPro:   IPR004017 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: =1.8.98.1 [H]

Molecular weight: Translated: 55283; Mature: 55283

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHTIRTDSLKRQLEQTTGNHYACCYQCGKCTAGCPAGGFMDNPPARIMRLVQAGYVEEA
CCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
MQSDSLWYCIGCMTCTARCPQNMEIAGTMDAVREMALKSGIISSDKAKKLVTAFHTSFLN
HCCCCEEEEHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
TVRKSGRLQELALVNSYKLRTRTFLQDAGAGLKMIKQGKINPVTAITAKETVEQKGQIEK
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEHHHHHHHHHHHHHH
IFKIAEQESHTAAPKRKPVKRTFKANEPVRITPGMTIGYYPGCSLSGTAKDYDISIRKMC
HHHHHHHHHHCCCCCCCCHHHHHCCCCCEEECCCCEEECCCCCCCCCCCCCCCHHHHHHH
DRLGIRLHEIEDWNCCGASSAHATNHKLSVLLPARNQALADQQGFDYVLAPCAACLNRQV
HHHCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHCCCCHHHHHHHHHHHCCHH
TARKALMESEELRNELKSIMGRDTECKAQFIGIMQVLEGMDPEEIKKRVTHPLKDMPLAC
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHCCCHHH
YYGCLLVRPFDAMGYDDPENPTKMEAIIEALGAKPVDWAYKVECCGAGLTMAQQEMIEDL
HHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHH
THKIAKNATVNGAGGFVVACPLCHTNLDMRQEGMRKRYNDVGEMPVYYISDLVAMACGAS
HHHHHHCCCCCCCCCEEEECCHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
PEEVALDKHFVPATGMVRNH
HHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEHTIRTDSLKRQLEQTTGNHYACCYQCGKCTAGCPAGGFMDNPPARIMRLVQAGYVEEA
CCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
MQSDSLWYCIGCMTCTARCPQNMEIAGTMDAVREMALKSGIISSDKAKKLVTAFHTSFLN
HCCCCEEEEHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
TVRKSGRLQELALVNSYKLRTRTFLQDAGAGLKMIKQGKINPVTAITAKETVEQKGQIEK
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEHHHHHHHHHHHHHH
IFKIAEQESHTAAPKRKPVKRTFKANEPVRITPGMTIGYYPGCSLSGTAKDYDISIRKMC
HHHHHHHHHHCCCCCCCCHHHHHCCCCCEEECCCCEEECCCCCCCCCCCCCCCHHHHHHH
DRLGIRLHEIEDWNCCGASSAHATNHKLSVLLPARNQALADQQGFDYVLAPCAACLNRQV
HHHCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHCCCCHHHHHHHHHHHCCHH
TARKALMESEELRNELKSIMGRDTECKAQFIGIMQVLEGMDPEEIKKRVTHPLKDMPLAC
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHCCCHHH
YYGCLLVRPFDAMGYDDPENPTKMEAIIEALGAKPVDWAYKVECCGAGLTMAQQEMIEDL
HHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHH
THKIAKNATVNGAGGFVVACPLCHTNLDMRQEGMRKRYNDVGEMPVYYISDLVAMACGAS
HHHHHHCCCCCCCCCEEEECCHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
PEEVALDKHFVPATGMVRNH
HHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]