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The map label for this gene is 21673999

Identifier: 21673999

GI number: 21673999

Start: 1103542

End: 1104021

Strand: Reverse

Name: 21673999

Synonym: CT1173

Alternate gene names: NA

Gene position: 1104021-1103542 (Counterclockwise)

Preceding gene: 21674003

Following gene: 21673998

Centisome position: 51.23

GC content: 50.21

Gene sequence:

>480_bases
ATGATATCTCATGAAGAAAATCTAAAGAACGCCGGTATTCTTCTCCCGGAAATCCCTTCAGCAGCGGGACTTTACCAGCC
AGCGGTACGGATTGGCGATCTGATTTACACTTCAGGTCAATTGCCACTGGTTGGCGGCAAACTGATGGAGCCAGGAGGAA
GGGGACGGGTGAGCGAAGCGAACGAACAGGAGGCGACGAAGGCTGCCAGAGTGGCCGCGCTTAATGCGGTTGCGGTACTT
CGATCCGTTACCGGAAATCTCGACACCGTGGCGAGAATCGTGAAGCTAACGATCTATGTTTCGAGCGCTGACGGGTTTAC
GAATCAACACAAAGTGGCCAACGGAGCATCGGAACTTGTCTATAAAATTTTTGGTGAATCGGGCCGGCATGTCAGGGTTG
CCGTTGGAGTTCTTGCTCTTCCTCTTGATGCCAGTGTTGAAGTTGAAATGATTGCTTATTGCCCTTTAATAAGACATTAA

Upstream 100 bases:

>100_bases
GGCACGATAACTATTTTCCAAAGGAATCGCAATCTGGAAAATCTATCCCTAACTGTTCGGATTTTCCGCTCTTTTCCCAA
ACAGAAAACACAAAAAGGTC

Downstream 100 bases:

>100_bases
ATCATATTTTAATTGTTCTTAGATCATAAAAAACATTTTAATAATCCAAGAACAAAGCCCATTTATTTAAAATATTTATT
TTTTAATATTTTTTTGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-PSP Family Protein; Translation Initiation Inhibitor YjgF Family; Endoribonuclease; Translation Initiation Inhibitor Protein; Endoribonuclease L-Psp; Endoribonuclease Family Protein; L-PSP Family Endoribonuclease; Endoribonuclease L-PSP Superfamily; Endoribonuclease L-PSP Family; Transcriptional Regulator; YjgF-Family Protein; Peptidase C; Translation Initiation Inhibitor YjgF; Endoribonuclease-L-PSP Family Protein

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MISHEENLKNAGILLPEIPSAAGLYQPAVRIGDLIYTSGQLPLVGGKLMEPGGRGRVSEANEQEATKAARVAALNAVAVL
RSVTGNLDTVARIVKLTIYVSSADGFTNQHKVANGASELVYKIFGESGRHVRVAVGVLALPLDASVEVEMIAYCPLIRH

Sequences:

>Translated_159_residues
MISHEENLKNAGILLPEIPSAAGLYQPAVRIGDLIYTSGQLPLVGGKLMEPGGRGRVSEANEQEATKAARVAALNAVAVL
RSVTGNLDTVARIVKLTIYVSSADGFTNQHKVANGASELVYKIFGESGRHVRVAVGVLALPLDASVEVEMIAYCPLIRH
>Mature_159_residues
MISHEENLKNAGILLPEIPSAAGLYQPAVRIGDLIYTSGQLPLVGGKLMEPGGRGRVSEANEQEATKAARVAALNAVAVL
RSVTGNLDTVARIVKLTIYVSSADGFTNQHKVANGASELVYKIFGESGRHVRVAVGVLALPLDASVEVEMIAYCPLIRH

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16815; Mature: 16815

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISHEENLKNAGILLPEIPSAAGLYQPAVRIGDLIYTSGQLPLVGGKLMEPGGRGRVSEA
CCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHEEEECCCCCEECCEEECCCCCCCCCCC
NEQEATKAARVAALNAVAVLRSVTGNLDTVARIVKLTIYVSSADGFTNQHKVANGASELV
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEEEEECCCCCCCCHHHHCCHHHHH
YKIFGESGRHVRVAVGVLALPLDASVEVEMIAYCPLIRH
HHHHCCCCCEEEEEEEEEEECCCCCCCEEHEEECHHCCC
>Mature Secondary Structure
MISHEENLKNAGILLPEIPSAAGLYQPAVRIGDLIYTSGQLPLVGGKLMEPGGRGRVSEA
CCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHEEEECCCCCEECCEEECCCCCCCCCCC
NEQEATKAARVAALNAVAVLRSVTGNLDTVARIVKLTIYVSSADGFTNQHKVANGASELV
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEEEEECCCCCCCCHHHHCCHHHHH
YKIFGESGRHVRVAVGVLALPLDASVEVEMIAYCPLIRH
HHHHCCCCCEEEEEEEEEEECCCCCCCEEHEEECHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA