| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673995
Identifier: 21673995
GI number: 21673995
Start: 1099692
End: 1100330
Strand: Reverse
Name: 21673995
Synonym: CT1169
Alternate gene names: NA
Gene position: 1100330-1099692 (Counterclockwise)
Preceding gene: 21673996
Following gene: 21673993
Centisome position: 51.06
GC content: 53.68
Gene sequence:
>639_bases ATGGATGTAGCAAGCGCCCTTGAGGGCAACTGGGAATTTCGGGTCGATCACAAGAACATCAAGATTTTTTCGTCGAAGAT CAGAGGTTCCCAGGTGCTGGGTTTCAAGGGGGAGGCCGTGTTCGAGGCGTCTCTCAGAAAGCTGATCAGCCTTTTTCACG ATTTTGGCAATTACGGGAAATGGGTGCATCAGCTTTCTGAGATGGAGGTGTTGCACAAGAGCGATGAGCTTGATTATGTC GTTCGCCAGGTGCTCAACACTCCTTGGCCGATTCCTAAAAGGGAGATGATCGTGCGCACCGCCCTGCACGCTTCCGAAGA GGGGGCGCTAGCCCTGACGATGACCGGTATTCCCGATTATGTTCCGTTGAAGCCTGATTTTCATCGTGTGCGCGAGGCCA GGGGGGGCTGGATATTGATGCCTGTGGATGGCGGCAAGGTACATGTGACTTTCGTGATGCATCTCGATCCCGGCAGCGAT ATCCCGCCCGCGCTTAGCAATGCAGCCCTCTTCGAGGTGCCGTTTTACTCATTGCTCAAGATGAGGGATCTTGCACAGAA TCCTTCCTACAAACCGGCGTGGCCTTCGGTGGTGGATAACCACGTCACCATCATTGAAGATGTGCCAGACAAGCACTGA
Upstream 100 bases:
>100_bases CTTGAAGGAATCGACGGAGGGCATCATCAGGAACTACAACGATTTCATCACCGAGTAATCCGCCGGGTCTGGCTCAATCA TTACCATAACTGCCAAGTCA
Downstream 100 bases:
>100_bases AGAGCTTGTCCGGTCTGACCGGCACGGCACCGACCTCCTGGCAGACAGTATTGGCCGCAAGATTGGCGATTCTGGTGCTG GTCACCAGGTCGAGGCCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MDVASALEGNWEFRVDHKNIKIFSSKIRGSQVLGFKGEAVFEASLRKLISLFHDFGNYGKWVHQLSEMEVLHKSDELDYV VRQVLNTPWPIPKREMIVRTALHASEEGALALTMTGIPDYVPLKPDFHRVREARGGWILMPVDGGKVHVTFVMHLDPGSD IPPALSNAALFEVPFYSLLKMRDLAQNPSYKPAWPSVVDNHVTIIEDVPDKH
Sequences:
>Translated_212_residues MDVASALEGNWEFRVDHKNIKIFSSKIRGSQVLGFKGEAVFEASLRKLISLFHDFGNYGKWVHQLSEMEVLHKSDELDYV VRQVLNTPWPIPKREMIVRTALHASEEGALALTMTGIPDYVPLKPDFHRVREARGGWILMPVDGGKVHVTFVMHLDPGSD IPPALSNAALFEVPFYSLLKMRDLAQNPSYKPAWPSVVDNHVTIIEDVPDKH >Mature_212_residues MDVASALEGNWEFRVDHKNIKIFSSKIRGSQVLGFKGEAVFEASLRKLISLFHDFGNYGKWVHQLSEMEVLHKSDELDYV VRQVLNTPWPIPKREMIVRTALHASEEGALALTMTGIPDYVPLKPDFHRVREARGGWILMPVDGGKVHVTFVMHLDPGSD IPPALSNAALFEVPFYSLLKMRDLAQNPSYKPAWPSVVDNHVTIIEDVPDKH
Specific function: May play a role in the interaction of the bacterium with animal cells [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 START domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002913 [H]
Pfam domain/function: PF01852 START [H]
EC number: NA
Molecular weight: Translated: 23965; Mature: 23965
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS50848 START
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVASALEGNWEFRVDHKNIKIFSSKIRGSQVLGFKGEAVFEASLRKLISLFHDFGNYGK CCCCHHHCCCEEEEEECCCEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHH WVHQLSEMEVLHKSDELDYVVRQVLNTPWPIPKREMIVRTALHASEEGALALTMTGIPDY HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCC VPLKPDFHRVREARGGWILMPVDGGKVHVTFVMHLDPGSDIPPALSNAALFEVPFYSLLK CCCCCCHHHHHHCCCCEEEEEECCCEEEEEEEEEECCCCCCCCCCCCCEEEECHHHHHHH MRDLAQNPSYKPAWPSVVDNHVTIIEDVPDKH HHHHHCCCCCCCCCCHHHCCCEEEEECCCCCC >Mature Secondary Structure MDVASALEGNWEFRVDHKNIKIFSSKIRGSQVLGFKGEAVFEASLRKLISLFHDFGNYGK CCCCHHHCCCEEEEEECCCEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHH WVHQLSEMEVLHKSDELDYVVRQVLNTPWPIPKREMIVRTALHASEEGALALTMTGIPDY HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCC VPLKPDFHRVREARGGWILMPVDGGKVHVTFVMHLDPGSDIPPALSNAALFEVPFYSLLK CCCCCCHHHHHHCCCCEEEEEECCCEEEEEEEEEECCCCCCCCCCCCCEEEECHHHHHHH MRDLAQNPSYKPAWPSVVDNHVTIIEDVPDKH HHHHHCCCCCCCCCCHHHCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043; 11276083 [H]