Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21673996

Identifier: 21673996

GI number: 21673996

Start: 1100373

End: 1101032

Strand: Reverse

Name: 21673996

Synonym: CT1170

Alternate gene names: NA

Gene position: 1101032-1100373 (Counterclockwise)

Preceding gene: 21673997

Following gene: 21673995

Centisome position: 51.09

GC content: 54.09

Gene sequence:

>660_bases
ATGTCACTACTTGAAAAAATCAACAGTAGCACCTGCACGCTCAGGTTCAAAAACGACTGGCTGAAGATATTCACCTGTCC
GGTGCCTTCATCCGATTTTCTGTCGTTCGTCGGCGTTGCCACCATCGATGCGCCCCAGCACGCCGTGCTCAGTCTTCTGT
ACGACATCGAGTCGGCAACCGAGTGGGTCTGGAAAACTCGGGAGATGCGCGTGCTCCAGGAGCTTGCCGACGACAACGAG
GGACGGGTGGTCTATCAGGTCGTGAGTGCTCCGTGGCCGGTGAGCGACAGGGAGATCATCAGCCGATCGACTGCCTACAA
GGATCCTGAAACAGGTGAAGTCTTTATCAAGATCGAAAGCCTGCCCGATTTCATTCCGGAAACCAGCAATTGCGTCAGGG
TGCGCAAACTCGAAGGTGCCTGGAATATCCTGCCGCTGTCCGAAAATTCGTGCCGCGTGGTTTTCAGGCTGCACATCGAG
CCTGCCGGAGAAATTCCGTCATGGCTTGCCAACATCGCGGTGATCGATACGCCGTATCATACGCTGAACAACATGCGCGA
CATGGTCAAGCGTGAAAAGTATAAAAATCCCGTTGGCGCGCCCTTGAAGGAATCGACGGAGGGCATCATCAGGAACTACA
ACGATTTCATCACCGAGTAA

Upstream 100 bases:

>100_bases
GCATTTCATCGAAAAGAGCGCTTCATGAGTCAATAGGAAAAAGCTGTTTTTCAGGCAGTACGGAGGCCTTTAACCAATTT
TTCATACAATCCGGTTTACT

Downstream 100 bases:

>100_bases
TCCGCCGGGTCTGGCTCAATCATTACCATAACTGCCAAGTCAATGGATGTAGCAAGCGCCCTTGAGGGCAACTGGGAATT
TCGGGTCGATCACAAGAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MSLLEKINSSTCTLRFKNDWLKIFTCPVPSSDFLSFVGVATIDAPQHAVLSLLYDIESATEWVWKTREMRVLQELADDNE
GRVVYQVVSAPWPVSDREIISRSTAYKDPETGEVFIKIESLPDFIPETSNCVRVRKLEGAWNILPLSENSCRVVFRLHIE
PAGEIPSWLANIAVIDTPYHTLNNMRDMVKREKYKNPVGAPLKESTEGIIRNYNDFITE

Sequences:

>Translated_219_residues
MSLLEKINSSTCTLRFKNDWLKIFTCPVPSSDFLSFVGVATIDAPQHAVLSLLYDIESATEWVWKTREMRVLQELADDNE
GRVVYQVVSAPWPVSDREIISRSTAYKDPETGEVFIKIESLPDFIPETSNCVRVRKLEGAWNILPLSENSCRVVFRLHIE
PAGEIPSWLANIAVIDTPYHTLNNMRDMVKREKYKNPVGAPLKESTEGIIRNYNDFITE
>Mature_218_residues
SLLEKINSSTCTLRFKNDWLKIFTCPVPSSDFLSFVGVATIDAPQHAVLSLLYDIESATEWVWKTREMRVLQELADDNEG
RVVYQVVSAPWPVSDREIISRSTAYKDPETGEVFIKIESLPDFIPETSNCVRVRKLEGAWNILPLSENSCRVVFRLHIEP
AGEIPSWLANIAVIDTPYHTLNNMRDMVKREKYKNPVGAPLKESTEGIIRNYNDFITE

Specific function: May play a role in the interaction of the bacterium with animal cells [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 START domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002913 [H]

Pfam domain/function: PF01852 START [H]

EC number: NA

Molecular weight: Translated: 25007; Mature: 24876

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS50848 START

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLEKINSSTCTLRFKNDWLKIFTCPVPSSDFLSFVGVATIDAPQHAVLSLLYDIESAT
CCHHHHCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHEECCCCHHHHHHHHHHHHHHH
EWVWKTREMRVLQELADDNEGRVVYQVVSAPWPVSDREIISRSTAYKDPETGEVFIKIES
HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEEEECC
LPDFIPETSNCVRVRKLEGAWNILPLSENSCRVVFRLHIEPAGEIPSWLANIAVIDTPYH
CCCCCCCCCCEEEEEEECCCEEEEEECCCCEEEEEEEEECCCCCHHHHHHHEEEEECCHH
TLNNMRDMVKREKYKNPVGAPLKESTEGIIRNYNDFITE
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHCC
>Mature Secondary Structure 
SLLEKINSSTCTLRFKNDWLKIFTCPVPSSDFLSFVGVATIDAPQHAVLSLLYDIESAT
CHHHHCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHEECCCCHHHHHHHHHHHHHHH
EWVWKTREMRVLQELADDNEGRVVYQVVSAPWPVSDREIISRSTAYKDPETGEVFIKIES
HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEEEECC
LPDFIPETSNCVRVRKLEGAWNILPLSENSCRVVFRLHIEPAGEIPSWLANIAVIDTPYH
CCCCCCCCCCEEEEEEECCCEEEEEECCCCEEEEEEEEECCCCCHHHHHHHEEEEECCHH
TLNNMRDMVKREKYKNPVGAPLKESTEGIIRNYNDFITE
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 11276083 [H]