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The map label for this gene is ybbM [C]

Identifier: 21673917

GI number: 21673917

Start: 1030661

End: 1031452

Strand: Reverse

Name: ybbM [C]

Synonym: CT1091

Alternate gene names: 21673917

Gene position: 1031452-1030661 (Counterclockwise)

Preceding gene: 21673918

Following gene: 21673915

Centisome position: 47.86

GC content: 56.06

Gene sequence:

>792_bases
ATGCTCATGAATCCGATCATCGAAATCTCCATACCGCAGCTGTTGCTGGCTTTGCTGTTCATTGTTGTCGCGCAGGCAAC
CTCGTTTGTTCAAAAGCTCGGTCTGAACAGGGATATTTCCATCGGAACCGTCCGCACGGTCTCACAGCTCTTCCTGATGG
GCTATGCGCTGACCTTCATTTTCAGAGCAGAGAACCTCTGGCTGACGCTCGGCATCTACGTCGTGATGGTCTTTTCGGCG
GTGTTCATCGTGCGGGGGCGGGTGAAGGAAAAGCAGATTGCCTACGAAGTGCCGACTTTTCTTACGATGCTGTCGAGCTA
CTTCCTCACGGCGCTCTTTGTCTCGTGGCTGGTGATCGGCGTGCATCCGTGGTGGGATCCGCGCTACTTCATTCCCACGG
CGGGGATGGTAATCGGCAACTCGATGTCCGCGCTTGCCATCTCCATCGAGCGTCTCTTCTCGCAGATGCGCCAGCAGCGC
GAGCTGGTCGAAATGAAACTCTGCCTCGGCGCGAACTACAAAGAGGCAAGCCTCGACATTTTCAGGGGAGCGGTCAAGGC
GGGTATGATTCCTTCGATCAACGCCATGATGGGCGTCGGCCTCGTCTTCATACCCGGCATGATGTCGGGTCAGATTCTCG
CCGGAGCCGACCCACTCATCGCCATCCGCTACCAGATCGTCGTCATGTTCATGCTCGTCGGTTCGACGGCTATGAGCACG
ATCATTGTGACGCTTATTATTCGCCGCCGGTGTTTTGGGAAAAGTGAGGAGTTGGTGGTGACTGCGGAGTGA

Upstream 100 bases:

>100_bases
ACACCGGAGAGGGCAAAACGGTGCTCATCGTTACGCACAGCGAATACCTGCCCGCGGTTCCGCAGGCCCGAAGCTGCACT
TTCCGCAACGGAAAACTCGA

Downstream 100 bases:

>100_bases
ATAGATAGAGATGCCTCTTCAAAGCTTTCACGACGACAATATGGTGAAATTTAAGGGCTGTTTATGAGATAGGAGAGAGA
TAAATTTGTAAGGTTCTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MLMNPIIEISIPQLLLALLFIVVAQATSFVQKLGLNRDISIGTVRTVSQLFLMGYALTFIFRAENLWLTLGIYVVMVFSA
VFIVRGRVKEKQIAYEVPTFLTMLSSYFLTALFVSWLVIGVHPWWDPRYFIPTAGMVIGNSMSALAISIERLFSQMRQQR
ELVEMKLCLGANYKEASLDIFRGAVKAGMIPSINAMMGVGLVFIPGMMSGQILAGADPLIAIRYQIVVMFMLVGSTAMST
IIVTLIIRRRCFGKSEELVVTAE

Sequences:

>Translated_263_residues
MLMNPIIEISIPQLLLALLFIVVAQATSFVQKLGLNRDISIGTVRTVSQLFLMGYALTFIFRAENLWLTLGIYVVMVFSA
VFIVRGRVKEKQIAYEVPTFLTMLSSYFLTALFVSWLVIGVHPWWDPRYFIPTAGMVIGNSMSALAISIERLFSQMRQQR
ELVEMKLCLGANYKEASLDIFRGAVKAGMIPSINAMMGVGLVFIPGMMSGQILAGADPLIAIRYQIVVMFMLVGSTAMST
IIVTLIIRRRCFGKSEELVVTAE
>Mature_263_residues
MLMNPIIEISIPQLLLALLFIVVAQATSFVQKLGLNRDISIGTVRTVSQLFLMGYALTFIFRAENLWLTLGIYVVMVFSA
VFIVRGRVKEKQIAYEVPTFLTMLSSYFLTALFVSWLVIGVHPWWDPRYFIPTAGMVIGNSMSALAISIERLFSQMRQQR
ELVEMKLCLGANYKEASLDIFRGAVKAGMIPSINAMMGVGLVFIPGMMSGQILAGADPLIAIRYQIVVMFMLVGSTAMST
IIVTLIIRRRCFGKSEELVVTAE

Specific function: Unknown

COG id: COG0390

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0014 family [H]

Homologues:

Organism=Escherichia coli, GI87081746, Length=254, Percent_Identity=35.0393700787402, Blast_Score=147, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005226 [H]

Pfam domain/function: PF03649 UPF0014 [H]

EC number: NA

Molecular weight: Translated: 29294; Mature: 29294

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHCCCCCCEEEEEC
>Mature Secondary Structure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HHHHHHHHHHHCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]