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The map label for this gene is yjcF [C]

Identifier: 21673871

GI number: 21673871

Start: 981861

End: 983510

Strand: Direct

Name: yjcF [C]

Synonym: CT1045

Alternate gene names: 21673871

Gene position: 981861-983510 (Clockwise)

Preceding gene: 21673870

Following gene: 21673874

Centisome position: 45.56

GC content: 55.45

Gene sequence:

>1650_bases
ATGAACAAAAAAGAGCCAATTGCTGACCGGGAACCGGAGCCCGGGAGCCAGACCTCCAAAACCACTCAGGCGTTCGAGAT
GTTGCGCAGATCGGTTCCGGAGTGGAATCTTTACAGACAGGAGCATCCCGGTGAGGCCGTGGAGTTCAACAAAAAGGATT
TCAGCGAGACCGATCTTTCCGGAGCCAACCTGAGCGACGCAAGTTTCAAGGCGGCCAATTTCAGCGGAGCCAGCCTCAGC
AGGGTTTCGTTCAGGGATGCGAAACTGAACGGCGCGGACTTCGCTGGCGCGGATTTGCGGCAGAGCGATCTGTCGAACGC
CGATCTCAGCGGAGCAAATCTTGTCATGGCCGACATGAGCGAGGCGAATCTGGACGGAGCCAATCTCAGCATGGCCGACC
TCAATCATGCCAATCTGAAAGGGGCGATTCTCACGCAGTCCAGGCTCAACTGTGCCAACCTCAACGAGTGCGATATGCGC
GAGGCGCACCTGAGCTGGGCCGATTTGTCTGGTGTGGCATTGAGCATGGCAAATGCTGGAGAGGCCGATCTTCATGATAC
CAAGCTCGATGAGGCTGATCTCTTGGGGGCGGATTTACACGACACGGATCTGCATGAGGCCGATCTGCACGAGGCCGATC
TCCGGGATGTGAATCTGCATCACGCCAATCTGCATGAAGCCGATCTGAGCAAAGCTGACCTGAGCGAGGCTGATCTGAGC
GACGCGGATTTGAGTGGCGCCGATCTGGGTGAAGCGCGGCTCCGCTGGACCAATCTCAAAGGCGCAAACCTGAGCGGCGC
TGATTTCAGTATGGCGAACCTGAACGGCGCGAATCTGACAGGAGCCAGCCTCTGCGGCGTTGACCTCACGGGCGCGAATC
TCTGCGACGCCAATCTGGAGAACGCGAATCTTTGTCTGGCCAATTTCAGGGGTACGGAGCTGAATATGACCAATCTGAGT
GGATCGGAGACGTTTCACACCTGTTTCATGAATGTCGATCTCAGAACGGTCAAGGGGCTTGATGCGATCAATCACCGGGG
GCCATCGGAAATCAGTATCAGCACCCTTTACCGATCGCAGGGACAGCTCTCCGACGCGTTCATGCGCGGATGCGGCGTGC
CTGAGGGAATGATCGATCATGTCAGATCCATGTCCGGCAAGGATTTTGATTACCTGTCGTGCATCATCAGCCACAGCTCC
CGTGACAAAAAGTTTGTCGAGCGTCTGTTCGCCGATTTGCAGAAAGAGGGAATCAGGTGCTGGCTTTGCCCCGACACGCT
CAAAAGCAATCGCTATCTCGAACAGTATCTCGACCGGGCGAATCAGTGCTGTGAAAAGATGCTGCTTGTCGTTTCCGATG
CCAGTATGAAGGGCGAGTGGTTGAAAAACACGTTCTTCAAAGCGGCTCAACGTGAAGCAAGAGATGGGCAGCGGTTGCTC
TTTCCGGTCAGCCTGGTCAGGGAGAGCAAGCTCGACGAGTGGGACCTGACCGATCACGAAAGCGGACGGAATTTTGGTCG
GGAGCTGAGGAAAAATTTCATCCCCCTGTTTTATGGTTGGGAGCGTGACAACGCTCTTTACAACAGTCAATTGAACCAGC
TTGTCGCTTCGCTGAAATCGGTCGATCCAGGCCGTTCATGCCAGCTTTGA

Upstream 100 bases:

>100_bases
TCTTGCGGCTGGCATGAAGGTCTGGATATCGATCAGGAGCTCGCTGGCAGTTTCTAACTGACTCCAGCTTCACAGTTAAA
AAATTTTATTCCTGATTTCC

Downstream 100 bases:

>100_bases
AAAGTCCTGGCGTTATGATATCGTTTCCCTAAAAGGCAGAAACCCTTTACAACCGTGTGGTGTAAAGGGTTTCCTGTTTT
TCAGTCTGTCTGGCTTACCG

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 549; Mature: 549

Protein sequence:

>549_residues
MNKKEPIADREPEPGSQTSKTTQAFEMLRRSVPEWNLYRQEHPGEAVEFNKKDFSETDLSGANLSDASFKAANFSGASLS
RVSFRDAKLNGADFAGADLRQSDLSNADLSGANLVMADMSEANLDGANLSMADLNHANLKGAILTQSRLNCANLNECDMR
EAHLSWADLSGVALSMANAGEADLHDTKLDEADLLGADLHDTDLHEADLHEADLRDVNLHHANLHEADLSKADLSEADLS
DADLSGADLGEARLRWTNLKGANLSGADFSMANLNGANLTGASLCGVDLTGANLCDANLENANLCLANFRGTELNMTNLS
GSETFHTCFMNVDLRTVKGLDAINHRGPSEISISTLYRSQGQLSDAFMRGCGVPEGMIDHVRSMSGKDFDYLSCIISHSS
RDKKFVERLFADLQKEGIRCWLCPDTLKSNRYLEQYLDRANQCCEKMLLVVSDASMKGEWLKNTFFKAAQREARDGQRLL
FPVSLVRESKLDEWDLTDHESGRNFGRELRKNFIPLFYGWERDNALYNSQLNQLVASLKSVDPGRSCQL

Sequences:

>Translated_549_residues
MNKKEPIADREPEPGSQTSKTTQAFEMLRRSVPEWNLYRQEHPGEAVEFNKKDFSETDLSGANLSDASFKAANFSGASLS
RVSFRDAKLNGADFAGADLRQSDLSNADLSGANLVMADMSEANLDGANLSMADLNHANLKGAILTQSRLNCANLNECDMR
EAHLSWADLSGVALSMANAGEADLHDTKLDEADLLGADLHDTDLHEADLHEADLRDVNLHHANLHEADLSKADLSEADLS
DADLSGADLGEARLRWTNLKGANLSGADFSMANLNGANLTGASLCGVDLTGANLCDANLENANLCLANFRGTELNMTNLS
GSETFHTCFMNVDLRTVKGLDAINHRGPSEISISTLYRSQGQLSDAFMRGCGVPEGMIDHVRSMSGKDFDYLSCIISHSS
RDKKFVERLFADLQKEGIRCWLCPDTLKSNRYLEQYLDRANQCCEKMLLVVSDASMKGEWLKNTFFKAAQREARDGQRLL
FPVSLVRESKLDEWDLTDHESGRNFGRELRKNFIPLFYGWERDNALYNSQLNQLVASLKSVDPGRSCQL
>Mature_549_residues
MNKKEPIADREPEPGSQTSKTTQAFEMLRRSVPEWNLYRQEHPGEAVEFNKKDFSETDLSGANLSDASFKAANFSGASLS
RVSFRDAKLNGADFAGADLRQSDLSNADLSGANLVMADMSEANLDGANLSMADLNHANLKGAILTQSRLNCANLNECDMR
EAHLSWADLSGVALSMANAGEADLHDTKLDEADLLGADLHDTDLHEADLHEADLRDVNLHHANLHEADLSKADLSEADLS
DADLSGADLGEARLRWTNLKGANLSGADFSMANLNGANLTGASLCGVDLTGANLCDANLENANLCLANFRGTELNMTNLS
GSETFHTCFMNVDLRTVKGLDAINHRGPSEISISTLYRSQGQLSDAFMRGCGVPEGMIDHVRSMSGKDFDYLSCIISHSS
RDKKFVERLFADLQKEGIRCWLCPDTLKSNRYLEQYLDRANQCCEKMLLVVSDASMKGEWLKNTFFKAAQREARDGQRLL
FPVSLVRESKLDEWDLTDHESGRNFGRELRKNFIPLFYGWERDNALYNSQLNQLVASLKSVDPGRSCQL

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

Organism=Homo sapiens, GI39753959, Length=177, Percent_Identity=35.5932203389831, Blast_Score=82, Evalue=1e-15,
Organism=Escherichia coli, GI1790502, Length=229, Percent_Identity=25.3275109170306, Blast_Score=66, Evalue=6e-12,
Organism=Drosophila melanogaster, GI221377802, Length=184, Percent_Identity=32.6086956521739, Blast_Score=83, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 60493; Mature: 60493

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKEPIADREPEPGSQTSKTTQAFEMLRRSVPEWNLYRQEHPGEAVEFNKKDFSETDLS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCEECCCCCCCCCCCC
GANLSDASFKAANFSGASLSRVSFRDAKLNGADFAGADLRQSDLSNADLSGANLVMADMS
CCCCCCCCCEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEECC
EANLDGANLSMADLNHANLKGAILTQSRLNCANLNECDMREAHLSWADLSGVALSMANAG
CCCCCCCCEEHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHCCHHHHCCCEEEECCCC
EADLHDTKLDEADLLGADLHDTDLHEADLHEADLRDVNLHHANLHEADLSKADLSEADLS
CCCCCCCCCCHHHHCCCCCCCCCCCHHHCCCCCCCCCCCEECCCCHHHCCHHCCCCCCCC
DADLSGADLGEARLRWTNLKGANLSGADFSMANLNGANLTGASLCGVDLTGANLCDANLE
CCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCEECCEECCCCCCCCCCCC
NANLCLANFRGTELNMTNLSGSETFHTCFMNVDLRTVKGLDAINHRGPSEISISTLYRSQ
CCCEEEEECCCCEEEEECCCCCCEEEEEEEECCHHHHHCCHHHHCCCCCCEEHHHHHHCC
GQLSDAFMRGCGVPEGMIDHVRSMSGKDFDYLSCIISHSSRDKKFVERLFADLQKEGIRC
CCHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEE
WLCPDTLKSNRYLEQYLDRANQCCEKMLLVVSDASMKGEWLKNTFFKAAQREARDGQRLL
EECCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEE
FPVSLVRESKLDEWDLTDHESGRNFGRELRKNFIPLFYGWERDNALYNSQLNQLVASLKS
EHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHC
VDPGRSCQL
CCCCCCCCC
>Mature Secondary Structure
MNKKEPIADREPEPGSQTSKTTQAFEMLRRSVPEWNLYRQEHPGEAVEFNKKDFSETDLS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCEECCCCCCCCCCCC
GANLSDASFKAANFSGASLSRVSFRDAKLNGADFAGADLRQSDLSNADLSGANLVMADMS
CCCCCCCCCEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEECC
EANLDGANLSMADLNHANLKGAILTQSRLNCANLNECDMREAHLSWADLSGVALSMANAG
CCCCCCCCEEHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHCCHHHHCCCEEEECCCC
EADLHDTKLDEADLLGADLHDTDLHEADLHEADLRDVNLHHANLHEADLSKADLSEADLS
CCCCCCCCCCHHHHCCCCCCCCCCCHHHCCCCCCCCCCCEECCCCHHHCCHHCCCCCCCC
DADLSGADLGEARLRWTNLKGANLSGADFSMANLNGANLTGASLCGVDLTGANLCDANLE
CCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCEECCEECCCCCCCCCCCC
NANLCLANFRGTELNMTNLSGSETFHTCFMNVDLRTVKGLDAINHRGPSEISISTLYRSQ
CCCEEEEECCCCEEEEECCCCCCEEEEEEEECCHHHHHCCHHHHCCCCCCEEHHHHHHCC
GQLSDAFMRGCGVPEGMIDHVRSMSGKDFDYLSCIISHSSRDKKFVERLFADLQKEGIRC
CCHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEE
WLCPDTLKSNRYLEQYLDRANQCCEKMLLVVSDASMKGEWLKNTFFKAAQREARDGQRLL
EECCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEE
FPVSLVRESKLDEWDLTDHESGRNFGRELRKNFIPLFYGWERDNALYNSQLNQLVASLKS
EHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHC
VDPGRSCQL
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA