| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is cobP [H]
Identifier: 21673773
GI number: 21673773
Start: 893350
End: 893868
Strand: Direct
Name: cobP [H]
Synonym: CT0945
Alternate gene names: 21673773
Gene position: 893350-893868 (Clockwise)
Preceding gene: 21673772
Following gene: 21673774
Centisome position: 41.46
GC content: 57.8
Gene sequence:
>519_bases ATGCCTGAAGTAATCTATGTGACCGGCGGAGCCCGGAGTGGCAAGAGCTGCTATGCGCTGAAGCTGGCCGAACGATACAA GTGTCGGGTGTTTCTTGCTACTGCCGAGGCGTTCGATGGGGAGATGCAGCGTCGTATCGACAAGCACAAACAGGAGCGCG ACGAGCGCTTTACGACGGTGGAGGAGCCGGTGTATCTCGACAAAGCGCTGCGCGCTTTACCCGACGGGACAGAGGTGGTG CTGGTCGATTGCCTGACCGTGTGGCTGGGAAACATGATGCACTATCTCGGCGATGAAGCGGCGATCAACGAGCGGATCGA CGCCCTGCTCGATGTACTGAAGAATCCGCCGTGCGACATCATTTTTGTTTCCAATGAAGTTGGTATGGGGATCGTGCCCG AAAACGCGATGGCACGCGAGTTCCGTGACCTGGCCGGCACGCTCAATCGCAAGGTGGCCGAACGCGCCACGCAGGCGTAT TTGCTGTGCAGCGGTTTGCCGCTTGTTTTGAAAAAGTAG
Upstream 100 bases:
>100_bases GTTCACGCTGGAGATTTTCTCGGAAGCAGATTTTTTGTCGTCAGTCGAGACGCTGGAGCGGTTTTCGTCATGACTCTTCA ATCGCATAATTATTGCACCT
Downstream 100 bases:
>100_bases TAACCAAAAAAGAGTAACCAAAAAAAAATCAATCGTTATGACCGACCGTTTTCAGCAGCTTCTGGCTTCTATCAAGCCTG TCGATATGAACCTAACCTCC
Product: cobalamin biosynthesis protein CobP
Products: NA
Alternate protein names: Adenosylcobinamide kinase; Adenosylcobinamide-phosphate guanylyltransferase [H]
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MPEVIYVTGGARSGKSCYALKLAERYKCRVFLATAEAFDGEMQRRIDKHKQERDERFTTVEEPVYLDKALRALPDGTEVV LVDCLTVWLGNMMHYLGDEAAINERIDALLDVLKNPPCDIIFVSNEVGMGIVPENAMAREFRDLAGTLNRKVAERATQAY LLCSGLPLVLKK
Sequences:
>Translated_172_residues MPEVIYVTGGARSGKSCYALKLAERYKCRVFLATAEAFDGEMQRRIDKHKQERDERFTTVEEPVYLDKALRALPDGTEVV LVDCLTVWLGNMMHYLGDEAAINERIDALLDVLKNPPCDIIFVSNEVGMGIVPENAMAREFRDLAGTLNRKVAERATQAY LLCSGLPLVLKK >Mature_171_residues PEVIYVTGGARSGKSCYALKLAERYKCRVFLATAEAFDGEMQRRIDKHKQERDERFTTVEEPVYLDKALRALPDGTEVVL VDCLTVWLGNMMHYLGDEAAINERIDALLDVLKNPPCDIIFVSNEVGMGIVPENAMAREFRDLAGTLNRKVAERATQAYL LCSGLPLVLKK
Specific function: Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate [H]
COG id: COG2087
COG function: function code H; Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788302, Length=180, Percent_Identity=40, Blast_Score=131, Evalue=3e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003203 [H]
Pfam domain/function: PF02283 CobU [H]
EC number: =2.7.1.156; =2.7.7.62 [H]
Molecular weight: Translated: 19296; Mature: 19164
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEVIYVTGGARSGKSCYALKLAERYKCRVFLATAEAFDGEMQRRIDKHKQERDERFTTV CCCEEEEECCCCCCCCCCEEEHHHHCEEEEEEEEHHHHCHHHHHHHHHHHHHHHHHCCHH EEPVYLDKALRALPDGTEVVLVDCLTVWLGNMMHYLGDEAAINERIDALLDVLKNPPCDI CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCE IFVSNEVGMGIVPENAMAREFRDLAGTLNRKVAERATQAYLLCSGLPLVLKK EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC >Mature Secondary Structure PEVIYVTGGARSGKSCYALKLAERYKCRVFLATAEAFDGEMQRRIDKHKQERDERFTTV CCEEEEECCCCCCCCCCEEEHHHHCEEEEEEEEHHHHCHHHHHHHHHHHHHHHHHCCHH EEPVYLDKALRALPDGTEVVLVDCLTVWLGNMMHYLGDEAAINERIDALLDVLKNPPCDI CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCE IFVSNEVGMGIVPENAMAREFRDLAGTLNRKVAERATQAYLLCSGLPLVLKK EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1655697; 1655696 [H]