| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is yjbB [H]
Identifier: 21673762
GI number: 21673762
Start: 880827
End: 882503
Strand: Direct
Name: yjbB [H]
Synonym: CT0934
Alternate gene names: 21673762
Gene position: 880827-882503 (Clockwise)
Preceding gene: 21673761
Following gene: 21673763
Centisome position: 40.87
GC content: 62.02
Gene sequence:
>1677_bases ATGATGGAATCGCAATCCGTACTATCGAATTTCCTGCTGTTCGCGGGCGGCCTCGCGGTGTTTCTGCTGGGAATGAAGTC TCTCAGCGCCGGACTGCGGAAGGCTTCGAGCGGACGGGTCGCGCATCTGCTCTCCACAATTACCGGCAACCCGGTGTCGG CGTTGCTGTCGGGCGTGGCGGCGACCGTGGCCGTGCAGTCGAGCAGCATGGTGATGCTGACGCTGATCGGGCTGGTGCAG TCGCAGATTCTCACCTTTTCGCAGTCGCTTGGCGTGGTACTTGGCGCGGAGATCGGCACCACCATGATGGCGCAGCTCAT CGCCTTTTCGCCGGGTGAGTTCGGATTGCCTCTTTTCGCCCTCGGCTTTTTCCTGTCGCTCATTCGTCGGCAGCGTGTGC TCTCTCTTTTCGGCGAGGCGATCTCCGGTCTCGGTTTGCTCTTTTTTGGCCTCAAGCTCATGGGCATGGCGGTTGAACCG CTGCAATCGAGCCCGCAGTTTCTCTCCATTCTGACCACGCTCGATAATCCCCTGCTTTGCGTGCTTGCCGGTGCGGTCAT GACGGCGATTATCCAGAGCAGCGGGGCGTTCATCGCCATTCTCATCACGATGGCGCAGCAGGGTGTGCTGACCCTCGAAG TGGCCGTGCCGCTGATGTTCGGGGCCAACATCGGCACCTGCATCACGGCGGCCATTGGCAGCGCCGGAAGCGTTCGCCCC GCCCGGCGGGTCTTTCTTGCGCAGCTCATGTTCAACGTCACCTACGTCATCGTCTTTCTCATCTTTCTGCCGCCCTGGCT CGACCTGATCCGCGCCATTTCGCCTTCCGATGCCGCCGGAGGGCTGGCGAGGCAGATCGCCAATGCCCACACCTTCTCCA ACCTGTTCATGGCGTTGCTGTTTCTGCCGTTTCTGCCGCAGTTCGGGCGGATGCTTGTCAAGCTGCTGCCCGACGATCCC GATGAGATGGGGCGGATTCCTGCGGTGTGGCATCTGCGCACCTCGGCACTCGCCACTCCCGAGGTGGCGGTTGGGCTGGC CCGACTGGAGATTTCGCGCATGAACAAGATTCTCGGACGGATGGCAAGCGCGCTGCCCGTGCCATTCATTGGTGGCGGGA ACGGGCGTGACCTCATCTACAAGCGGCTTGGGGTGAGCGAGGGGCTGATGATGCGCGAGGAGAAGCTCGATTTTCTGGAG CAGAAGGTTACTGCGTACCTGATCCGCGTCATGCAGGAGGCGGTCGGCGAGCCGCTGATCCGGGAGGCCGCGGCGCTGAT GGCGCTGGCCAAGGAGATCGAGTCGGCAGGCGATGTGGTCGAAACCCTGCTGGCCGATTTTCCGTCGGGAAAGCTCAATG TCGGCTTGACCGCAGAGGGAAAGGCGGAGATCGAGCGGCTGCACGAACAGGTGTGCCGCGAGATCGCGGCCATGAACCTG GCCATCGAGGAGATGAGTCCCCGCAGGGCCTCGGCGGTGATCGAAGAGGGCAAGGCGTTCGACCGCATCTTTTTCGATCT TGGATTTTCGCACATGCGGCGCATCAAGAGCCGTTCCGAATCGGAGCGCACGCACGACCTGCATATGGAGCTGCTCCGGG CGCTCGACGTGCTGCATCATCAGGCCATGTCGATGGCACGCACCATCGTTGGCATGACTGCCGACCGCAATGCGTGA
Upstream 100 bases:
>100_bases CGGGCCTCGGCTTGACGAGGTGTTCGAGTACCGGCGGTGCAGGGTCGCTGAAATTCTGGGCGAGATGGCGTCTGAAACGC GCTGAAAACAGATACGGAAG
Downstream 100 bases:
>100_bases GTCGCTTGTAATTGCGATGGAAAATCGTAAATTCCGCCCACAAAGAAGATGTTCTTTCACATGATTAGCTGGTGCCGGTT TTAAAGCCGGAGAATAGGGA
Product: transporter, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 558; Mature: 558
Protein sequence:
>558_residues MMESQSVLSNFLLFAGGLAVFLLGMKSLSAGLRKASSGRVAHLLSTITGNPVSALLSGVAATVAVQSSSMVMLTLIGLVQ SQILTFSQSLGVVLGAEIGTTMMAQLIAFSPGEFGLPLFALGFFLSLIRRQRVLSLFGEAISGLGLLFFGLKLMGMAVEP LQSSPQFLSILTTLDNPLLCVLAGAVMTAIIQSSGAFIAILITMAQQGVLTLEVAVPLMFGANIGTCITAAIGSAGSVRP ARRVFLAQLMFNVTYVIVFLIFLPPWLDLIRAISPSDAAGGLARQIANAHTFSNLFMALLFLPFLPQFGRMLVKLLPDDP DEMGRIPAVWHLRTSALATPEVAVGLARLEISRMNKILGRMASALPVPFIGGGNGRDLIYKRLGVSEGLMMREEKLDFLE QKVTAYLIRVMQEAVGEPLIREAAALMALAKEIESAGDVVETLLADFPSGKLNVGLTAEGKAEIERLHEQVCREIAAMNL AIEEMSPRRASAVIEEGKAFDRIFFDLGFSHMRRIKSRSESERTHDLHMELLRALDVLHHQAMSMARTIVGMTADRNA
Sequences:
>Translated_558_residues MMESQSVLSNFLLFAGGLAVFLLGMKSLSAGLRKASSGRVAHLLSTITGNPVSALLSGVAATVAVQSSSMVMLTLIGLVQ SQILTFSQSLGVVLGAEIGTTMMAQLIAFSPGEFGLPLFALGFFLSLIRRQRVLSLFGEAISGLGLLFFGLKLMGMAVEP LQSSPQFLSILTTLDNPLLCVLAGAVMTAIIQSSGAFIAILITMAQQGVLTLEVAVPLMFGANIGTCITAAIGSAGSVRP ARRVFLAQLMFNVTYVIVFLIFLPPWLDLIRAISPSDAAGGLARQIANAHTFSNLFMALLFLPFLPQFGRMLVKLLPDDP DEMGRIPAVWHLRTSALATPEVAVGLARLEISRMNKILGRMASALPVPFIGGGNGRDLIYKRLGVSEGLMMREEKLDFLE QKVTAYLIRVMQEAVGEPLIREAAALMALAKEIESAGDVVETLLADFPSGKLNVGLTAEGKAEIERLHEQVCREIAAMNL AIEEMSPRRASAVIEEGKAFDRIFFDLGFSHMRRIKSRSESERTHDLHMELLRALDVLHHQAMSMARTIVGMTADRNA >Mature_558_residues MMESQSVLSNFLLFAGGLAVFLLGMKSLSAGLRKASSGRVAHLLSTITGNPVSALLSGVAATVAVQSSSMVMLTLIGLVQ SQILTFSQSLGVVLGAEIGTTMMAQLIAFSPGEFGLPLFALGFFLSLIRRQRVLSLFGEAISGLGLLFFGLKLMGMAVEP LQSSPQFLSILTTLDNPLLCVLAGAVMTAIIQSSGAFIAILITMAQQGVLTLEVAVPLMFGANIGTCITAAIGSAGSVRP ARRVFLAQLMFNVTYVIVFLIFLPPWLDLIRAISPSDAAGGLARQIANAHTFSNLFMALLFLPFLPQFGRMLVKLLPDDP DEMGRIPAVWHLRTSALATPEVAVGLARLEISRMNKILGRMASALPVPFIGGGNGRDLIYKRLGVSEGLMMREEKLDFLE QKVTAYLIRVMQEAVGEPLIREAAALMALAKEIESAGDVVETLLADFPSGKLNVGLTAEGKAEIERLHEQVCREIAAMNL AIEEMSPRRASAVIEEGKAFDRIFFDLGFSHMRRIKSRSESERTHDLHMELLRALDVLHHQAMSMARTIVGMTADRNA
Specific function: Unknown
COG id: COG1283
COG function: function code P; Na+/phosphate symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yqeW [H]
Homologues:
Organism=Escherichia coli, GI1790451, Length=546, Percent_Identity=24.9084249084249, Blast_Score=115, Evalue=8e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003841 - InterPro: IPR004633 [H]
Pfam domain/function: PF02690 Na_Pi_cotrans [H]
EC number: NA
Molecular weight: Translated: 60071; Mature: 60071
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMESQSVLSNFLLFAGGLAVFLLGMKSLSAGLRKASSGRVAHLLSTITGNPVSALLSGVA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHH ATVAVQSSSMVMLTLIGLVQSQILTFSQSLGVVLGAEIGTTMMAQLIAFSPGEFGLPLFA HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHH LGFFLSLIRRQRVLSLFGEAISGLGLLFFGLKLMGMAVEPLQSSPQFLSILTTLDNPLLC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHH VLAGAVMTAIIQSSGAFIAILITMAQQGVLTLEVAVPLMFGANIGTCITAAIGSAGSVRP HHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEHHHHHHHHHCCCHHHHHHHHHCCCCCCCH ARRVFLAQLMFNVTYVIVFLIFLPPWLDLIRAISPSDAAGGLARQIANAHTFSNLFMALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH FLPFLPQFGRMLVKLLPDDPDEMGRIPAVWHLRTSALATPEVAVGLARLEISRMNKILGR HHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHH MASALPVPFIGGGNGRDLIYKRLGVSEGLMMREEKLDFLEQKVTAYLIRVMQEAVGEPLI HHHHCCCCEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH REAAALMALAKEIESAGDVVETLLADFPSGKLNVGLTAEGKAEIERLHEQVCREIAAMNL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH AIEEMSPRRASAVIEEGKAFDRIFFDLGFSHMRRIKSRSESERTHDLHMELLRALDVLHH HHHHCCCHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAMSMARTIVGMTADRNA HHHHHHHHHHHCCCCCCC >Mature Secondary Structure MMESQSVLSNFLLFAGGLAVFLLGMKSLSAGLRKASSGRVAHLLSTITGNPVSALLSGVA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHH ATVAVQSSSMVMLTLIGLVQSQILTFSQSLGVVLGAEIGTTMMAQLIAFSPGEFGLPLFA HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHH LGFFLSLIRRQRVLSLFGEAISGLGLLFFGLKLMGMAVEPLQSSPQFLSILTTLDNPLLC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHH VLAGAVMTAIIQSSGAFIAILITMAQQGVLTLEVAVPLMFGANIGTCITAAIGSAGSVRP HHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEHHHHHHHHHCCCHHHHHHHHHCCCCCCCH ARRVFLAQLMFNVTYVIVFLIFLPPWLDLIRAISPSDAAGGLARQIANAHTFSNLFMALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH FLPFLPQFGRMLVKLLPDDPDEMGRIPAVWHLRTSALATPEVAVGLARLEISRMNKILGR HHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHH MASALPVPFIGGGNGRDLIYKRLGVSEGLMMREEKLDFLEQKVTAYLIRVMQEAVGEPLI HHHHCCCCEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH REAAALMALAKEIESAGDVVETLLADFPSGKLNVGLTAEGKAEIERLHEQVCREIAAMNL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH AIEEMSPRRASAVIEEGKAFDRIFFDLGFSHMRRIKSRSESERTHDLHMELLRALDVLHH HHHHCCCHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAMSMARTIVGMTADRNA HHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]