| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is 21673756
Identifier: 21673756
GI number: 21673756
Start: 876654
End: 877247
Strand: Reverse
Name: 21673756
Synonym: CT0928
Alternate gene names: NA
Gene position: 877247-876654 (Counterclockwise)
Preceding gene: 21673757
Following gene: 21673755
Centisome position: 40.71
GC content: 63.8
Gene sequence:
>594_bases ATGATCGCGAGCAAAACGGCAACGACGCGCCGCTACGTCATCACTGGCGGGCCGGGCAGCGGCAAAAGTACGCTTATCGA AGCGCTCGAAGCGCGCGGCCAGCGCTGCTACCCGGAGGTCTCGCGAGAGCTGATCCGCCGCGAAGCACGCCGCCCGAACG GCGTGATGCCCTGGAACGACCTCGAAGCGTTCGCCCGCCTCGCCTTCACGGAGATGCTCCTCCAGCACGACCACGCCGAA GAGGCTGGCGAACGCTGCTTCTTCGACCGCGCCATCCCCGACATCTTCGGCTACCTGCTCGAGCGCGGCATCGACATCCA GGAAAGCTGGCTCGACGTTCACCGCCGGTGCCGCTACGAACGCACGGTCTTCATCCTTCCGCCGTGGCCCGAAATCTACG TCAACGACGCCGAACGCCCCCAAACCCTCGCCGAAGCCAACGCGCTCCACAACGCCATCCACGCGGTCTATGAATCGCTG GGTTACGAGTTGATCGAAGTGCCGAGAATGCCGGTCGAAGCGAGATGCGAGTTCGTGCTGGGGAGGTTGTGCTGCGGGAA GGAAGAGGCAATCAAGTACTCCCGCAAAGCTTGA
Upstream 100 bases:
>100_bases AAAACTTTTCCGCGTCGGCAACACCATCGCCTCGTACCTTCACCTCTACTGGGGCGAGCACGACTACCTTGCTAACTGGT TCGACGTGTTGAGGTAAAAA
Downstream 100 bases:
>100_bases CTTCACTGCAGAAGGGATTAGCACGTCGCTGTGCTCCTCGCAATGACACACGACTGAAAAATTGACCATTGTCATCAGAG CCCTCGAATGAAGAACCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MIASKTATTRRYVITGGPGSGKSTLIEALEARGQRCYPEVSRELIRREARRPNGVMPWNDLEAFARLAFTEMLLQHDHAE EAGERCFFDRAIPDIFGYLLERGIDIQESWLDVHRRCRYERTVFILPPWPEIYVNDAERPQTLAEANALHNAIHAVYESL GYELIEVPRMPVEARCEFVLGRLCCGKEEAIKYSRKA
Sequences:
>Translated_197_residues MIASKTATTRRYVITGGPGSGKSTLIEALEARGQRCYPEVSRELIRREARRPNGVMPWNDLEAFARLAFTEMLLQHDHAE EAGERCFFDRAIPDIFGYLLERGIDIQESWLDVHRRCRYERTVFILPPWPEIYVNDAERPQTLAEANALHNAIHAVYESL GYELIEVPRMPVEARCEFVLGRLCCGKEEAIKYSRKA >Mature_197_residues MIASKTATTRRYVITGGPGSGKSTLIEALEARGQRCYPEVSRELIRREARRPNGVMPWNDLEAFARLAFTEMLLQHDHAE EAGERCFFDRAIPDIFGYLLERGIDIQESWLDVHRRCRYERTVFILPPWPEIYVNDAERPQTLAEANALHNAIHAVYESL GYELIEVPRMPVEARCEFVLGRLCCGKEEAIKYSRKA
Specific function: Unknown
COG id: COG3911
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22656; Mature: 22656
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIASKTATTRRYVITGGPGSGKSTLIEALEARGQRCYPEVSRELIRREARRPNGVMPWND CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHH LEAFARLAFTEMLLQHDHAEEAGERCFFDRAIPDIFGYLLERGIDIQESWLDVHRRCRYE HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC RTVFILPPWPEIYVNDAERPQTLAEANALHNAIHAVYESLGYELIEVPRMPVEARCEFVL CEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCHHHHHHHHH GRLCCGKEEAIKYSRKA HHHHCCHHHHHHHHCCC >Mature Secondary Structure MIASKTATTRRYVITGGPGSGKSTLIEALEARGQRCYPEVSRELIRREARRPNGVMPWND CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHH LEAFARLAFTEMLLQHDHAEEAGERCFFDRAIPDIFGYLLERGIDIQESWLDVHRRCRYE HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC RTVFILPPWPEIYVNDAERPQTLAEANALHNAIHAVYESLGYELIEVPRMPVEARCEFVL CEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCHHHHHHHHH GRLCCGKEEAIKYSRKA HHHHCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA