| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673688
Identifier: 21673688
GI number: 21673688
Start: 816969
End: 817916
Strand: Direct
Name: 21673688
Synonym: CT0859
Alternate gene names: NA
Gene position: 816969-817916 (Clockwise)
Preceding gene: 21673686
Following gene: 21673689
Centisome position: 37.91
GC content: 56.01
Gene sequence:
>948_bases ATGGTTTTTAAACAGATCAGAAACTGGATTGTTCCGGGTGTTCTTGGCTTGTTGCTATTGATGATGCCAGATATATCATT TGCCGACGGTACTACCCAGATTGCAGCGACGGCGTGGTGGGTTTGGGTGCTGGTGCTTTTCGTCTTCTCCTTTTTGCTTG GCATTGTGGCCGTGCTGGCCGGTGTCGGTGGCGGCGTGCTTTTCGTGCCGATCGTCAGTGGTTTTTTCCCATTTCATATC GATTACGTCCGTGGAGCGGGGCTTCTCGTGGCTCTTGCGGGGGCGCTTTCCGCCGGGCCGCCGCTGCTCAGAAAAGGGAT AGCTGATCTCAAGCTCGGTTTGCCGATGGCACTTGTCGGTTCGATCAGCTCCATTGCCGGCGCTCTGATGGGGTTGGCGA TGCCTGCAAAAAACGTGCAGCTTCTGCTCGGTATCGTGATTCTCGGTATTACCGCGATCATGCTCAAGGCCGGAAAGTCC GGATACCCCGAAGTGAAGGAGCCAGACGCTCTGTCGAAAATGCTCGGCATCTCCGGATGCTATTTCGAGGAGTTTGGTCA GCACGAGGTTTCGTGGCAGGTACACAGGACGCTGGTTGCAACGGTGCTGTTTTTCATCATCGGCTTCATCGGCGGCATGT TCGGCCTTGGCGCCGGATTCGCCAACGTGCCGGTTTTCAACCTGCTCATGGGCGTTCCGCTGAAGGTTGCCGTGGCAACC AGCGGTTTGGTGCTTTCGATCAACGGGTCGGCGGCGGCCTGGGTCTATATGTTCAATGGGGCCGTGCTTCCGATCATTGC CGTACCCGCCGTTGGCGGCATGATGCTCGGCTCGAAGATCGGTGCGAAACTGTTGCCGAAGGTCAACACCAGAACCATAC GGATGATTGTCATCACCATTCTGGCGCTTTCGGGTTTTCGTTCATTGCTGAAAGGGATGGGGGGATGA
Upstream 100 bases:
>100_bases TACAAAATGATTTTACTTCAGCGCATTCTGGATTCAGGGCATCCCCGAACGGGAACGTCACGGAATCAATATGTTTGTCC TAACATAAAAACCTGTTTTC
Downstream 100 bases:
>100_bases ATCAGGGCAAACCCGAAAAGCTCTACGCCGACAGCGTACAGCTCGCGTACGCGAAAACCCTTGAATTCGTATCGCACGCG ATCATCATTTTGATGGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Domain Protein
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MVFKQIRNWIVPGVLGLLLLMMPDISFADGTTQIAATAWWVWVLVLFVFSFLLGIVAVLAGVGGGVLFVPIVSGFFPFHI DYVRGAGLLVALAGALSAGPPLLRKGIADLKLGLPMALVGSISSIAGALMGLAMPAKNVQLLLGIVILGITAIMLKAGKS GYPEVKEPDALSKMLGISGCYFEEFGQHEVSWQVHRTLVATVLFFIIGFIGGMFGLGAGFANVPVFNLLMGVPLKVAVAT SGLVLSINGSAAAWVYMFNGAVLPIIAVPAVGGMMLGSKIGAKLLPKVNTRTIRMIVITILALSGFRSLLKGMGG
Sequences:
>Translated_315_residues MVFKQIRNWIVPGVLGLLLLMMPDISFADGTTQIAATAWWVWVLVLFVFSFLLGIVAVLAGVGGGVLFVPIVSGFFPFHI DYVRGAGLLVALAGALSAGPPLLRKGIADLKLGLPMALVGSISSIAGALMGLAMPAKNVQLLLGIVILGITAIMLKAGKS GYPEVKEPDALSKMLGISGCYFEEFGQHEVSWQVHRTLVATVLFFIIGFIGGMFGLGAGFANVPVFNLLMGVPLKVAVAT SGLVLSINGSAAAWVYMFNGAVLPIIAVPAVGGMMLGSKIGAKLLPKVNTRTIRMIVITILALSGFRSLLKGMGG >Mature_315_residues MVFKQIRNWIVPGVLGLLLLMMPDISFADGTTQIAATAWWVWVLVLFVFSFLLGIVAVLAGVGGGVLFVPIVSGFFPFHI DYVRGAGLLVALAGALSAGPPLLRKGIADLKLGLPMALVGSISSIAGALMGLAMPAKNVQLLLGIVILGITAIMLKAGKS GYPEVKEPDALSKMLGISGCYFEEFGQHEVSWQVHRTLVATVLFFIIGFIGGMFGLGAGFANVPVFNLLMGVPLKVAVAT SGLVLSINGSAAAWVYMFNGAVLPIIAVPAVGGMMLGSKIGAKLLPKVNTRTIRMIVITILALSGFRSLLKGMGG
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32851; Mature: 32851
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFKQIRNWIVPGVLGLLLLMMPDISFADGTTQIAATAWWVWVLVLFVFSFLLGIVAVLA CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVGGGVLFVPIVSGFFPFHIDYVRGAGLLVALAGALSAGPPLLRKGIADLKLGLPMALVG CCCCCEEHHHHHHCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHCHHHHHHCCHHHHHH SISSIAGALMGLAMPAKNVQLLLGIVILGITAIMLKAGKSGYPEVKEPDALSKMLGISGC HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCH YFEEFGQHEVSWQVHRTLVATVLFFIIGFIGGMFGLGAGFANVPVFNLLMGVPLKVAVAT HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEC SGLVLSINGSAAAWVYMFNGAVLPIIAVPAVGGMMLGSKIGAKLLPKVNTRTIRMIVITI CCEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LALSGFRSLLKGMGG HHHHHHHHHHHHCCC >Mature Secondary Structure MVFKQIRNWIVPGVLGLLLLMMPDISFADGTTQIAATAWWVWVLVLFVFSFLLGIVAVLA CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVGGGVLFVPIVSGFFPFHIDYVRGAGLLVALAGALSAGPPLLRKGIADLKLGLPMALVG CCCCCEEHHHHHHCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHCHHHHHHCCHHHHHH SISSIAGALMGLAMPAKNVQLLLGIVILGITAIMLKAGKSGYPEVKEPDALSKMLGISGC HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCH YFEEFGQHEVSWQVHRTLVATVLFFIIGFIGGMFGLGAGFANVPVFNLLMGVPLKVAVAT HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEC SGLVLSINGSAAAWVYMFNGAVLPIIAVPAVGGMMLGSKIGAKLLPKVNTRTIRMIVITI CCEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LALSGFRSLLKGMGG HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA