| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is 21673689
Identifier: 21673689
GI number: 21673689
Start: 817913
End: 818347
Strand: Direct
Name: 21673689
Synonym: CT0860
Alternate gene names: NA
Gene position: 817913-818347 (Clockwise)
Preceding gene: 21673688
Following gene: 21673690
Centisome position: 37.96
GC content: 53.33
Gene sequence:
>435_bases ATGAATCAGGGCAAACCCGAAAAGCTCTACGCCGACAGCGTACAGCTCGCGTACGCGAAAACCCTTGAATTCGTATCGCA CGCGATCATCATTTTGATGGCGATCGGCTTCATACTCTATGTTTTCCGGTTGCTGCCGCTCACCGTTCCGGTGGAAACGG TTGCGGCGAACTGGCATCTGAATGCCACGAAACTGCAGGTGAAAATTCACCATCACTGCGGGTGGAGCTGCTTCGAGGAT GTGCACACCTTCATGCACGGAGACGCTGTCAGTTACGCATCGGTGGTTTTTCTTTCCCTGGCGACCATGATTTGCCTGGC GACGTCCACCATGGCTTTTTTCAGGGAGAAAAATCGCATCTACCTCGTGATAACGATTTTGCAGATTCTTGTGCTGCTCG TGGCGGCCAGTGGCAAGCTGACCTCCGGTCACTGA
Upstream 100 bases:
>100_bases CGAAACTGTTGCCGAAGGTCAACACCAGAACCATACGGATGATTGTCATCACCATTCTGGCGCTTTCGGGTTTTCGTTCA TTGCTGAAAGGGATGGGGGG
Downstream 100 bases:
>100_bases CAGGCGACAGGGCTGCGGCTGGTATGGGTAAAAATTCTCAAAAACGATAAACCAGAAAATTCATCACCTATGTCTGATAC CAAAAAACTCGCGATTATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MNQGKPEKLYADSVQLAYAKTLEFVSHAIIILMAIGFILYVFRLLPLTVPVETVAANWHLNATKLQVKIHHHCGWSCFED VHTFMHGDAVSYASVVFLSLATMICLATSTMAFFREKNRIYLVITILQILVLLVAASGKLTSGH
Sequences:
>Translated_144_residues MNQGKPEKLYADSVQLAYAKTLEFVSHAIIILMAIGFILYVFRLLPLTVPVETVAANWHLNATKLQVKIHHHCGWSCFED VHTFMHGDAVSYASVVFLSLATMICLATSTMAFFREKNRIYLVITILQILVLLVAASGKLTSGH >Mature_144_residues MNQGKPEKLYADSVQLAYAKTLEFVSHAIIILMAIGFILYVFRLLPLTVPVETVAANWHLNATKLQVKIHHHCGWSCFED VHTFMHGDAVSYASVVFLSLATMICLATSTMAFFREKNRIYLVITILQILVLLVAASGKLTSGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020327 - ProDom: PD085044 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16049; Mature: 16049
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQGKPEKLYADSVQLAYAKTLEFVSHAIIILMAIGFILYVFRLLPLTVPVETVAANWHL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCC NATKLQVKIHHHCGWSCFEDVHTFMHGDAVSYASVVFLSLATMICLATSTMAFFREKNRI CCEEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE YLVITILQILVLLVAASGKLTSGH EEHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNQGKPEKLYADSVQLAYAKTLEFVSHAIIILMAIGFILYVFRLLPLTVPVETVAANWHL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCC NATKLQVKIHHHCGWSCFEDVHTFMHGDAVSYASVVFLSLATMICLATSTMAFFREKNRI CCEEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE YLVITILQILVLLVAASGKLTSGH EEHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]