| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673656
Identifier: 21673656
GI number: 21673656
Start: 786441
End: 786917
Strand: Direct
Name: 21673656
Synonym: CT0827
Alternate gene names: NA
Gene position: 786441-786917 (Clockwise)
Preceding gene: 21673654
Following gene: 21673657
Centisome position: 36.49
GC content: 50.31
Gene sequence:
>477_bases ATGGGGGAACTAATCATGAAAAAGACAATCATCACATCGCTTGTAGCTATCGCTGCTTTTGGCTTCGCTGGCACGGCACA CGCTGATTCATTCGCAACCTACAGCTCGCTTAATACGTTGAGTGCTGGTACAGACGATCCAAACGGCGTCAGCTATGGTT ATTCTTATGACTGGGGCGGGGTAAGCTCTTCATGCTGCAACGGTTCGTCAGCTGTCGGCAGTTATACTGAAATTGACGCT TTTGGTGTGGGCGATGGTTCATTGAGTGCTGTTTCTGGCTTCCAGGGGAAGGCAGAACAGGGCGCGAACAGCAGCTTTGC AACCGCGGCCGGTATTGCTGCATCCAGTAATAGTGGCTTGACAAATTATGGTTATCCTGTCGTTGATGTTTCTGTTGATG GAGGCGCGTATGCTCAGAGCTCGAGTTATGCTTCCTATTCCTGGATGACTGTCTGGGGCGGAAGTACTTCCTGGTAA
Upstream 100 bases:
>100_bases GAGTACTTAAATTATAACCGTAGCCTCACCAATCAACTTTAGGTAGGCCTGTTCTTTGATCATGATCATAAGGTTAACAA ACACCAAACTCTCTAAACCA
Downstream 100 bases:
>100_bases TTGACATCAGGTAGTACTATGGCGGCCAATAACCGGGTTACGGCAAGGAACAAGTTGGTTATTGGCCGCCTTTCTTTCCT AAGGGGTAAATGCCCCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MGELIMKKTIITSLVAIAAFGFAGTAHADSFATYSSLNTLSAGTDDPNGVSYGYSYDWGGVSSSCCNGSSAVGSYTEIDA FGVGDGSLSAVSGFQGKAEQGANSSFATAAGIAASSNSGLTNYGYPVVDVSVDGGAYAQSSSYASYSWMTVWGGSTSW
Sequences:
>Translated_158_residues MGELIMKKTIITSLVAIAAFGFAGTAHADSFATYSSLNTLSAGTDDPNGVSYGYSYDWGGVSSSCCNGSSAVGSYTEIDA FGVGDGSLSAVSGFQGKAEQGANSSFATAAGIAASSNSGLTNYGYPVVDVSVDGGAYAQSSSYASYSWMTVWGGSTSW >Mature_157_residues GELIMKKTIITSLVAIAAFGFAGTAHADSFATYSSLNTLSAGTDDPNGVSYGYSYDWGGVSSSCCNGSSAVGSYTEIDAF GVGDGSLSAVSGFQGKAEQGANSSFATAAGIAASSNSGLTNYGYPVVDVSVDGGAYAQSSSYASYSWMTVWGGSTSW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15861; Mature: 15730
Theoretical pI: Translated: 3.78; Mature: 3.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGELIMKKTIITSLVAIAAFGFAGTAHADSFATYSSLNTLSAGTDDPNGVSYGYSYDWGG CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC VSSSCCNGSSAVGSYTEIDAFGVGDGSLSAVSGFQGKAEQGANSSFATAAGIAASSNSGL CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCEEECCCCCC TNYGYPVVDVSVDGGAYAQSSSYASYSWMTVWGGSTSW CCCCCEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCC >Mature Secondary Structure GELIMKKTIITSLVAIAAFGFAGTAHADSFATYSSLNTLSAGTDDPNGVSYGYSYDWGG CCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC VSSSCCNGSSAVGSYTEIDAFGVGDGSLSAVSGFQGKAEQGANSSFATAAGIAASSNSGL CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCEEECCCCCC TNYGYPVVDVSVDGGAYAQSSSYASYSWMTVWGGSTSW CCCCCEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA