| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is 21673568
Identifier: 21673568
GI number: 21673568
Start: 717577
End: 718143
Strand: Reverse
Name: 21673568
Synonym: CT0738
Alternate gene names: NA
Gene position: 718143-717577 (Counterclockwise)
Preceding gene: 21673574
Following gene: 21673566
Centisome position: 33.33
GC content: 58.02
Gene sequence:
>567_bases GTGCGGAAGGGGTGGGAGATGTTCAAGGGGAACATTGGCGAGTTCATCGGCTTCACACTCATCTGCTTTGCGGCCTCGAT CGTGAGTTCGAAAATGGCCGCATTCGGCTCGCTACTCTTTTCAGCCATAGCCGCGCCGCTTTACGCCGGATACACCATCG CGGCGTTCAGAATCATGACCGGCCAGGAGCTTCAGTTCAGCGACTTTTTCAAGGGATTCAACTATTTCTTGCCACTCTTC CTCGCCGGGCTGGCAAGCGGCATCCTCGTAGCCGTCGGGCTGGTGCTGCTCATCCTGCCGGGCATTTATCTCGCCATCGG CTACATGCTGGCCACATTCCTCATCATCGACCACGGCATGGAGTTCTGGCAGGCAATGGAGACGAGCCGCAAGATCATCA CGAAAAACTGGTTCGCCTTTTTCGTCTTCGCGGTTGTGCTGTTCCTTGTCAATGTGCTGGGCGCGCTCGCCCTCGGCGTC GGCCTGCTGGTTTCGGCTCCGGTAACAGCCTGCGCCACCGCAATTGCGTACAAGGAGATCGTCGGGCTGCACTCGGCAGA GTGGTAA
Upstream 100 bases:
>100_bases GAGAAAAATCATGGCACCGTTTGATTTCGGACAAAAAGTCGACCCCGCGCTTTTTGACAAGCTCATCGAGGATGGCTATC AGGTCAACACTTCCGATTAT
Downstream 100 bases:
>100_bases GCGAATTATCTGAACACCATCAACCATTGTCATTCGCAGTGGAACAACCGTAATACGAGTCAGTGCTTTTAGTACGACAT ATTTCCGAGCCAAAAGAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MRKGWEMFKGNIGEFIGFTLICFAASIVSSKMAAFGSLLFSAIAAPLYAGYTIAAFRIMTGQELQFSDFFKGFNYFLPLF LAGLASGILVAVGLVLLILPGIYLAIGYMLATFLIIDHGMEFWQAMETSRKIITKNWFAFFVFAVVLFLVNVLGALALGV GLLVSAPVTACATAIAYKEIVGLHSAEW
Sequences:
>Translated_188_residues MRKGWEMFKGNIGEFIGFTLICFAASIVSSKMAAFGSLLFSAIAAPLYAGYTIAAFRIMTGQELQFSDFFKGFNYFLPLF LAGLASGILVAVGLVLLILPGIYLAIGYMLATFLIIDHGMEFWQAMETSRKIITKNWFAFFVFAVVLFLVNVLGALALGV GLLVSAPVTACATAIAYKEIVGLHSAEW >Mature_188_residues MRKGWEMFKGNIGEFIGFTLICFAASIVSSKMAAFGSLLFSAIAAPLYAGYTIAAFRIMTGQELQFSDFFKGFNYFLPLF LAGLASGILVAVGLVLLILPGIYLAIGYMLATFLIIDHGMEFWQAMETSRKIITKNWFAFFVFAVVLFLVNVLGALALGV GLLVSAPVTACATAIAYKEIVGLHSAEW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20410; Mature: 20410
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKGWEMFKGNIGEFIGFTLICFAASIVSSKMAAFGSLLFSAIAAPLYAGYTIAAFRIMT CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GQELQFSDFFKGFNYFLPLFLAGLASGILVAVGLVLLILPGIYLAIGYMLATFLIIDHGM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EFWQAMETSRKIITKNWFAFFVFAVVLFLVNVLGALALGVGLLVSAPVTACATAIAYKEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGLHSAEW HHHHCCCC >Mature Secondary Structure MRKGWEMFKGNIGEFIGFTLICFAASIVSSKMAAFGSLLFSAIAAPLYAGYTIAAFRIMT CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GQELQFSDFFKGFNYFLPLFLAGLASGILVAVGLVLLILPGIYLAIGYMLATFLIIDHGM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EFWQAMETSRKIITKNWFAFFVFAVVLFLVNVLGALALGVGLLVSAPVTACATAIAYKEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGLHSAEW HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA