| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is ykhA [H]
Identifier: 21673574
GI number: 21673574
Start: 721466
End: 721822
Strand: Reverse
Name: ykhA [H]
Synonym: CT0744
Alternate gene names: 21673574
Gene position: 721822-721466 (Counterclockwise)
Preceding gene: 21673575
Following gene: 21673568
Centisome position: 33.5
GC content: 52.1
Gene sequence:
>357_bases ATGGAAACATACAAGCTCGTGATGCCGGAGCACCTCAACCATTACGGTTTCCTGTTCGGCGGCAATCTGCTCAAATGGAT TGACGAGGTCAGCTACATCGCCGTGACGCTCGACTATCCCGGCTGCAACTTCGTCACGGTCGGCATGGACAACATCAAGT TCAAAAAAAGCATCCGGCAGGGTACCATTCTCTGCTTCGAGTCGAAGAAGAACCATATCGGCACCACCTCGGTGGAATAT ACCGTGGATGTGACCAGAGAGGAGATCAGCACCGGTAGCAGAGAGCTGGTGTTCACCACCCGGATAACCTTTGTCAGCGT CGATGAAAATGGCAGGAAAAAAGCGATTTCGGCTTGA
Upstream 100 bases:
>100_bases ATGATGAATTTTATGTAGTTGAACCAGTCGCGAAAATCGTTCATTGAACCTACAGAACTTATAACCCTTATTTTCTAAAA ACCTTACAAAATCAACAATC
Downstream 100 bases:
>100_bases CGGAAATGAAACGGGCCGCGTCGAGGCGGCCCTGAAACAAGCGTGCGGCGGAATCAGAACTTGCCGCCGACGAGGCTGAA AAGCAGGAACATGAACACAA
Product: cytosolic long-chain acyl-CoA thioester hydrolase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues METYKLVMPEHLNHYGFLFGGNLLKWIDEVSYIAVTLDYPGCNFVTVGMDNIKFKKSIRQGTILCFESKKNHIGTTSVEY TVDVTREEISTGSRELVFTTRITFVSVDENGRKKAISA
Sequences:
>Translated_118_residues METYKLVMPEHLNHYGFLFGGNLLKWIDEVSYIAVTLDYPGCNFVTVGMDNIKFKKSIRQGTILCFESKKNHIGTTSVEY TVDVTREEISTGSRELVFTTRITFVSVDENGRKKAISA >Mature_118_residues METYKLVMPEHLNHYGFLFGGNLLKWIDEVSYIAVTLDYPGCNFVTVGMDNIKFKKSIRQGTILCFESKKNHIGTTSVEY TVDVTREEISTGSRELVFTTRITFVSVDENGRKKAISA
Specific function: Unknown
COG id: COG1607
COG function: function code I; Acyl-CoA hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyl coenzyme A hydrolase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006683 [H]
Pfam domain/function: PF03061 4HBT [H]
EC number: 3.1.2.- [C]
Molecular weight: Translated: 13392; Mature: 13392
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METYKLVMPEHLNHYGFLFGGNLLKWIDEVSYIAVTLDYPGCNFVTVGMDNIKFKKSIRQ CCCEEEECCCCCCCEEEEECCHHHHHHCCCEEEEEEEECCCCCEEEECCCCCEEHHCCCC GTILCFESKKNHIGTTSVEYTVDVTREEISTGSRELVFTTRITFVSVDENGRKKAISA CEEEEEECCCCCCCCCEEEEEEEEEHHHHCCCCEEEEEEEEEEEEEECCCCCEECCCC >Mature Secondary Structure METYKLVMPEHLNHYGFLFGGNLLKWIDEVSYIAVTLDYPGCNFVTVGMDNIKFKKSIRQ CCCEEEECCCCCCCEEEEECCHHHHHHCCCEEEEEEEECCCCCEEEECCCCCEEHHCCCC GTILCFESKKNHIGTTSVEYTVDVTREEISTGSRELVFTTRITFVSVDENGRKKAISA CEEEEEECCCCCCCCCEEEEEEEEEHHHHCCCCEEEEEEEEEEEEEECCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8682784; 9384377; 10568751 [H]