Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is ykhA [H]

Identifier: 21673574

GI number: 21673574

Start: 721466

End: 721822

Strand: Reverse

Name: ykhA [H]

Synonym: CT0744

Alternate gene names: 21673574

Gene position: 721822-721466 (Counterclockwise)

Preceding gene: 21673575

Following gene: 21673568

Centisome position: 33.5

GC content: 52.1

Gene sequence:

>357_bases
ATGGAAACATACAAGCTCGTGATGCCGGAGCACCTCAACCATTACGGTTTCCTGTTCGGCGGCAATCTGCTCAAATGGAT
TGACGAGGTCAGCTACATCGCCGTGACGCTCGACTATCCCGGCTGCAACTTCGTCACGGTCGGCATGGACAACATCAAGT
TCAAAAAAAGCATCCGGCAGGGTACCATTCTCTGCTTCGAGTCGAAGAAGAACCATATCGGCACCACCTCGGTGGAATAT
ACCGTGGATGTGACCAGAGAGGAGATCAGCACCGGTAGCAGAGAGCTGGTGTTCACCACCCGGATAACCTTTGTCAGCGT
CGATGAAAATGGCAGGAAAAAAGCGATTTCGGCTTGA

Upstream 100 bases:

>100_bases
ATGATGAATTTTATGTAGTTGAACCAGTCGCGAAAATCGTTCATTGAACCTACAGAACTTATAACCCTTATTTTCTAAAA
ACCTTACAAAATCAACAATC

Downstream 100 bases:

>100_bases
CGGAAATGAAACGGGCCGCGTCGAGGCGGCCCTGAAACAAGCGTGCGGCGGAATCAGAACTTGCCGCCGACGAGGCTGAA
AAGCAGGAACATGAACACAA

Product: cytosolic long-chain acyl-CoA thioester hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
METYKLVMPEHLNHYGFLFGGNLLKWIDEVSYIAVTLDYPGCNFVTVGMDNIKFKKSIRQGTILCFESKKNHIGTTSVEY
TVDVTREEISTGSRELVFTTRITFVSVDENGRKKAISA

Sequences:

>Translated_118_residues
METYKLVMPEHLNHYGFLFGGNLLKWIDEVSYIAVTLDYPGCNFVTVGMDNIKFKKSIRQGTILCFESKKNHIGTTSVEY
TVDVTREEISTGSRELVFTTRITFVSVDENGRKKAISA
>Mature_118_residues
METYKLVMPEHLNHYGFLFGGNLLKWIDEVSYIAVTLDYPGCNFVTVGMDNIKFKKSIRQGTILCFESKKNHIGTTSVEY
TVDVTREEISTGSRELVFTTRITFVSVDENGRKKAISA

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 13392; Mature: 13392

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METYKLVMPEHLNHYGFLFGGNLLKWIDEVSYIAVTLDYPGCNFVTVGMDNIKFKKSIRQ
CCCEEEECCCCCCCEEEEECCHHHHHHCCCEEEEEEEECCCCCEEEECCCCCEEHHCCCC
GTILCFESKKNHIGTTSVEYTVDVTREEISTGSRELVFTTRITFVSVDENGRKKAISA
CEEEEEECCCCCCCCCEEEEEEEEEHHHHCCCCEEEEEEEEEEEEEECCCCCEECCCC
>Mature Secondary Structure
METYKLVMPEHLNHYGFLFGGNLLKWIDEVSYIAVTLDYPGCNFVTVGMDNIKFKKSIRQ
CCCEEEECCCCCCCEEEEECCHHHHHHCCCEEEEEEEECCCCCEEEECCCCCEEHHCCCC
GTILCFESKKNHIGTTSVEYTVDVTREEISTGSRELVFTTRITFVSVDENGRKKAISA
CEEEEEECCCCCCCCCEEEEEEEEEHHHHCCCCEEEEEEEEEEEEEECCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8682784; 9384377; 10568751 [H]