| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is mtd [H]
Identifier: 21673549
GI number: 21673549
Start: 701432
End: 702322
Strand: Direct
Name: mtd [H]
Synonym: CT0719
Alternate gene names: 21673549
Gene position: 701432-702322 (Clockwise)
Preceding gene: 21673547
Following gene: 21673550
Centisome position: 32.55
GC content: 56.79
Gene sequence:
>891_bases ATGAAAGTGCTTGAACCGAACCCTGTTGCCGCCTCGTTTCGTGACGCCGTCCGCCGGCAGATTAGCGAGGAGCAGCTTAC GATCAACATTGTTGGTATTCTCGCCTCAGACGACCCCGCCTCGATCACTTATGCCGACTATACCCGCGCCGGATGCGAAG ATGTTGGCATTCATTTTGATCTCAGGAAGTGCGAGCCGGAGTCGGTGAGAGCCACCCTCGAAGCGGCTAATCGCGACAGC GCTGTTCACGGCATTTTCGTCTATTACCCGATCTGGGGCGACAAGCGCGACGCGGAGTTGCGCGACCTGATTTCGCCACA CAAGGATGTTGAGGGGTTGTCGCCGCACTGGATCAAAAAGCTCTACGCCAACGAGCGTTTCGACGACACGGAACGGAGAT TCAAGTCGATTTTGCCCTGTACGCCGCTGGCCATTATCAAGCTGCTCGAAGTCACTGAAGCTTACGCACCCTTCGGCTTG CCGTTTGGCGGCCAGCAGATCACCATTTTCAACCGCTCGGAGGTCGTCGGCAGACCGCTTGCTTACATGCTCTCGAACGA CGGCGCACGTGTTTACTCTTTCGATATTAACGGCGGTTTTGTCGTCGACGTCAACAGCTCTGACCACGAATCGCGCCCCG TCACGCGTGAGGAGGCGCTCAGCCAGTCGGATATCGTTATCACTGGCGTGCCGTCGCCGCACTTTGAAAAGGTGAGGGCT GAGGAGCTGAAGCCGGGCGCGATCTGTCTCAACTTCTCCTATATCCAGAACTTCGAGCCGGAGGCCAAAGAGGCTGCGTC GCTTTACATTCCGAGGGTCGGCCCCATGACGGTGGCCATGTGTATGAGAAACGCCCTGCAACTCTATCACAACTACCACC ATGAAGTCTGA
Upstream 100 bases:
>100_bases TCCGGCAGGAGCATAGCCCGCCATCTCCTTGAATATTCCATTCCCGGCACTTGCGCCCGTCAGGAACCTCGATGAACCGA ACCGACCCCACCACTGAATC
Downstream 100 bases:
>100_bases CGGAACGCTCGGGTGGAGCGCAATCTCCACCTATCTCGACAGTCTTGCCAGCGCTGACCCCACTCCCGGCGGCGGCGCGG CGGCGGCAGTCACGGCGGCA
Product: methylenetetrahydrofolate dehydrogenase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase [H]
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MKVLEPNPVAASFRDAVRRQISEEQLTINIVGILASDDPASITYADYTRAGCEDVGIHFDLRKCEPESVRATLEAANRDS AVHGIFVYYPIWGDKRDAELRDLISPHKDVEGLSPHWIKKLYANERFDDTERRFKSILPCTPLAIIKLLEVTEAYAPFGL PFGGQQITIFNRSEVVGRPLAYMLSNDGARVYSFDINGGFVVDVNSSDHESRPVTREEALSQSDIVITGVPSPHFEKVRA EELKPGAICLNFSYIQNFEPEAKEAASLYIPRVGPMTVAMCMRNALQLYHNYHHEV
Sequences:
>Translated_296_residues MKVLEPNPVAASFRDAVRRQISEEQLTINIVGILASDDPASITYADYTRAGCEDVGIHFDLRKCEPESVRATLEAANRDS AVHGIFVYYPIWGDKRDAELRDLISPHKDVEGLSPHWIKKLYANERFDDTERRFKSILPCTPLAIIKLLEVTEAYAPFGL PFGGQQITIFNRSEVVGRPLAYMLSNDGARVYSFDINGGFVVDVNSSDHESRPVTREEALSQSDIVITGVPSPHFEKVRA EELKPGAICLNFSYIQNFEPEAKEAASLYIPRVGPMTVAMCMRNALQLYHNYHHEV >Mature_296_residues MKVLEPNPVAASFRDAVRRQISEEQLTINIVGILASDDPASITYADYTRAGCEDVGIHFDLRKCEPESVRATLEAANRDS AVHGIFVYYPIWGDKRDAELRDLISPHKDVEGLSPHWIKKLYANERFDDTERRFKSILPCTPLAIIKLLEVTEAYAPFGL PFGGQQITIFNRSEVVGRPLAYMLSNDGARVYSFDINGGFVVDVNSSDHESRPVTREEALSQSDIVITGVPSPHFEKVRA EELKPGAICLNFSYIQNFEPEAKEAASLYIPRVGPMTVAMCMRNALQLYHNYHHEV
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate [H]
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family [H]
Homologues:
Organism=Homo sapiens, GI222136639, Length=319, Percent_Identity=26.9592476489028, Blast_Score=90, Evalue=3e-18, Organism=Escherichia coli, GI1786741, Length=277, Percent_Identity=26.7148014440433, Blast_Score=81, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17568735, Length=236, Percent_Identity=28.8135593220339, Blast_Score=77, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6322933, Length=302, Percent_Identity=41.3907284768212, Blast_Score=225, Evalue=8e-60, Organism=Saccharomyces cerevisiae, GI6321643, Length=323, Percent_Identity=26.3157894736842, Blast_Score=76, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6319558, Length=317, Percent_Identity=24.6056782334385, Blast_Score=71, Evalue=3e-13, Organism=Drosophila melanogaster, GI24645718, Length=319, Percent_Identity=24.7648902821317, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI17137370, Length=319, Percent_Identity=24.7648902821317, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI62472483, Length=319, Percent_Identity=24.7648902821317, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI45551871, Length=319, Percent_Identity=24.7648902821317, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI17136816, Length=280, Percent_Identity=23.2142857142857, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI17136818, Length=280, Percent_Identity=23.2142857142857, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 [H]
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C [H]
EC number: =1.5.1.5; =3.5.4.9 [H]
Molecular weight: Translated: 33244; Mature: 33244
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLEPNPVAASFRDAVRRQISEEQLTINIVGILASDDPASITYADYTRAGCEDVGIHFD CCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCEEEECCCCCCCCCCCCEEEE LRKCEPESVRATLEAANRDSAVHGIFVYYPIWGDKRDAELRDLISPHKDVEGLSPHWIKK ECCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHCCCCCCCCCCCHHHHHH LYANERFDDTERRFKSILPCTPLAIIKLLEVTEAYAPFGLPFGGQQITIFNRSEVVGRPL HHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHCCCC AYMLSNDGARVYSFDINGGFVVDVNSSDHESRPVTREEALSQSDIVITGVPSPHFEKVRA EEEECCCCCEEEEEECCCCEEEECCCCCCCCCCCCHHHHCCCCCEEEECCCCCHHHHHHH EELKPGAICLNFSYIQNFEPEAKEAASLYIPRVGPMTVAMCMRNALQLYHNYHHEV HHCCCCEEEEEEHHHHCCCCCHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKVLEPNPVAASFRDAVRRQISEEQLTINIVGILASDDPASITYADYTRAGCEDVGIHFD CCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCEEEECCCCCCCCCCCCEEEE LRKCEPESVRATLEAANRDSAVHGIFVYYPIWGDKRDAELRDLISPHKDVEGLSPHWIKK ECCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHCCCCCCCCCCCHHHHHH LYANERFDDTERRFKSILPCTPLAIIKLLEVTEAYAPFGLPFGGQQITIFNRSEVVGRPL HHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHCCCC AYMLSNDGARVYSFDINGGFVVDVNSSDHESRPVTREEALSQSDIVITGVPSPHFEKVRA EEEECCCCCEEEEEECCCCEEEECCCCCCCCCCCCHHHHCCCCCEEEECCCCCHHHHHHH EELKPGAICLNFSYIQNFEPEAKEAASLYIPRVGPMTVAMCMRNALQLYHNYHHEV HHCCCCEEEEEEHHHHCCCCCHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA