| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is nudG [H]
Identifier: 21673518
GI number: 21673518
Start: 678791
End: 679225
Strand: Direct
Name: nudG [H]
Synonym: CT0687
Alternate gene names: 21673518
Gene position: 678791-679225 (Clockwise)
Preceding gene: 21673517
Following gene: 21673519
Centisome position: 31.5
GC content: 58.62
Gene sequence:
>435_bases ATGGTTATCGGCGACGTCGTTTGCGCCATCATCGAGCGTGATGGCCGGTTTCTCATAGCCCGGAGACCGGAGGGGAAACA TCTTGCACGGAAATGGGAGTTCCCGGGCGGCAAGGTCGAGGCTGGCGAATCGGAGGCAGCAGCGCTTGATCGGGAGCTCC AGGAAGAGCTTGGAGTGAGGGTGGAAATTATCGAACGCCTCACTCCGGTCGAGCACAGCTACCCGGACCGGTCGCTTCGG TTGATCGCTTTTCGTTGCAGGATTGTCGATGGAGTGCCGGATGCTGGCGAGCATGAGGAGCTGCGATGGATCGAAATCGA TGAAGCCGGCGCATACGATTTTCCGGAGGCAGATCTTCCCATTCTTGCCGAGTATCGCCTCAAAATCGCCGCTGTGCCAC CGGGTGCTCCCGATCAGCTGCATAAAGCGGATTGA
Upstream 100 bases:
>100_bases GATGGAGAGGTGAGGTTTCGTTGGCCGAACTTTTTCTTCCTTTTTCCCTTCCTTGAGTGCGGTTTGCGAATTGTGCCTTC CATAACTTGGAACTGAAATA
Downstream 100 bases:
>100_bases GTACAGCTCTTTTCAGGGAGGGCAAGGTTCATTGTTCCGGCTGAACGGGCGCAGTTCCGTGTCGTGCCTGGTGAACGCTC GCGTGATTTTTCAGCATTGA
Product: Nudix family protein, MutT subfamily
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MVIGDVVCAIIERDGRFLIARRPEGKHLARKWEFPGGKVEAGESEAAALDRELQEELGVRVEIIERLTPVEHSYPDRSLR LIAFRCRIVDGVPDAGEHEELRWIEIDEAGAYDFPEADLPILAEYRLKIAAVPPGAPDQLHKAD
Sequences:
>Translated_144_residues MVIGDVVCAIIERDGRFLIARRPEGKHLARKWEFPGGKVEAGESEAAALDRELQEELGVRVEIIERLTPVEHSYPDRSLR LIAFRCRIVDGVPDAGEHEELRWIEIDEAGAYDFPEADLPILAEYRLKIAAVPPGAPDQLHKAD >Mature_144_residues MVIGDVVCAIIERDGRFLIARRPEGKHLARKWEFPGGKVEAGESEAAALDRELQEELGVRVEIIERLTPVEHSYPDRSLR LIAFRCRIVDGVPDAGEHEELRWIEIDEAGAYDFPEADLPILAEYRLKIAAVPPGAPDQLHKAD
Specific function: Specific for pyrimidine substrates. Acts on 5-methyl- dCTP, CTP and dCTP in decreasing order [H]
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1788056, Length=133, Percent_Identity=40.6015037593985, Blast_Score=87, Evalue=3e-19, Organism=Escherichia coli, GI1786288, Length=120, Percent_Identity=34.1666666666667, Blast_Score=76, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020476 - InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00293 NUDIX [H]
EC number: 3.6.1.-
Molecular weight: Translated: 16148; Mature: 16148
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIGDVVCAIIERDGRFLIARRPEGKHLARKWEFPGGKVEAGESEAAALDRELQEELGVR CCHHHEEHEEHHCCCCEEEEECCCCCCHHEECCCCCCEEECCCHHHHHHHHHHHHHHCCE VEIIERLTPVEHSYPDRSLRLIAFRCRIVDGVPDAGEHEELRWIEIDEAGAYDFPEADLP EEHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCC ILAEYRLKIAAVPPGAPDQLHKAD EEEECEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MVIGDVVCAIIERDGRFLIARRPEGKHLARKWEFPGGKVEAGESEAAALDRELQEELGVR CCHHHEEHEEHHCCCCEEEEECCCCCCHHEECCCCCCEEECCCHHHHHHHHHHHHHHCCE VEIIERLTPVEHSYPDRSLRLIAFRCRIVDGVPDAGEHEELRWIEIDEAGAYDFPEADLP EEHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCC ILAEYRLKIAAVPPGAPDQLHKAD EEEECEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Fe; Mn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 11053429 [H]